RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 FAM90A26D6RGX4 464 aa13.25□□□□□ -0.29
CMTM3-203ENST00000460097 EREGO14944 169 aa13.25□□□□□ -0.29
CMTM3-203ENST00000460097 ZNF737O75373 536 aa13.25□□□□□ -0.29
CMTM3-203ENST00000460097 MBP02144 154 aa13.25□□□□□ -0.29
CMTM3-203ENST00000460097 FAM27E3Q08E93 113 aa13.25□□□□□ -0.29
CMTM3-203ENST00000460097 LINC00596Q86U02 117 aa13.25□□□□□ -0.29
CMTM3-203ENST00000460097 GBGT1Q8N5D6 347 aa13.25□□□□□ -0.29
CMTM3-203ENST00000460097 GPR146Q96CH1 333 aa13.25□□□□□ -0.29
CMTM3-203ENST00000460097 SNHG12Q9BXW3 62 aa13.25□□□□□ -0.29
CMTM3-203ENST00000460097 WDR61Q9GZS3 305 aaKnown RBP13.25□□□□□ -0.29
CMTM3-203ENST00000460097 ARID1AO14497 2285 aa13.25□□□□□ -0.29
CMTM3-203ENST00000460097 NPIPB11E5RHQ5 1161 aa13.25□□□□□ -0.29
CMTM3-203ENST00000460097 COX5BP10606 129 aa13.25□□□□□ -0.29
CMTM3-203ENST00000460097 FBXW9Q5XUX1 488 aa13.25□□□□□ -0.29
CMTM3-203ENST00000460097 LCN15Q6UWW0 184 aa13.25□□□□□ -0.29
CMTM3-203ENST00000460097 Q6ZT83 130 aa13.25□□□□□ -0.29
CMTM3-203ENST00000460097 OR2T10Q8NGZ9 312 aa13.25□□□□□ -0.29
CMTM3-203ENST00000460097 OR51I2Q9H344 312 aa13.25□□□□□ -0.29
CMTM3-203ENST00000460097 RBKSQ9H477 322 aa13.25□□□□□ -0.29
CMTM3-203ENST00000460097 CHODLQ9H9P2 273 aa13.25□□□□□ -0.29
CMTM3-203ENST00000460097 HCFC1P51610 2035 aa13.24□□□□□ -0.29
CMTM3-203ENST00000460097 FREM1Q5H8C1 2179 aa13.24□□□□□ -0.29
CMTM3-203ENST00000460097 SYNGR2O43760 224 aa13.24□□□□□ -0.29
CMTM3-203ENST00000460097 OR7C1O76099 320 aaPredicted RBP13.24□□□□□ -0.29
CMTM3-203ENST00000460097 IGHV3-9P01782 118 aa13.24□□□□□ -0.29
CMTM3-203ENST00000460097 LCATP04180 440 aa13.24□□□□□ -0.29
CMTM3-203ENST00000460097 PSMB3P49720 205 aa13.24□□□□□ -0.29
CMTM3-203ENST00000460097 FGF12P61328 243 aa13.24□□□□□ -0.29
CMTM3-203ENST00000460097 PCBD1P61457 104 aa13.24□□□□□ -0.29
CMTM3-203ENST00000460097 ADIRFQ15847 76 aa13.24□□□□□ -0.29
CMTM3-203ENST00000460097 KCNIP4Q6PIL6 250 aa13.24□□□□□ -0.29
CMTM3-203ENST00000460097 BRICD5Q6PL45 260 aa13.24□□□□□ -0.29
CMTM3-203ENST00000460097 OR2AE1Q8NHA4 323 aa13.24□□□□□ -0.29
CMTM3-203ENST00000460097 IGKV1D-13A0A0B4J2D9 117 aa13.23□□□□□ -0.29
CMTM3-203ENST00000460097 ZNF705GA8MUZ8 300 aaPredicted RBP13.23□□□□□ -0.29
CMTM3-203ENST00000460097 C16orf97H3BN30 126 aa13.23□□□□□ -0.29
CMTM3-203ENST00000460097 HLA-HP01893 362 aa13.23□□□□□ -0.29
CMTM3-203ENST00000460097 IGKV1-13P0DP09 117 aa13.23□□□□□ -0.29
CMTM3-203ENST00000460097 GZMHP20718 246 aa13.23□□□□□ -0.29
CMTM3-203ENST00000460097 COL8A1P27658 744 aa13.23□□□□□ -0.29
CMTM3-203ENST00000460097 OR10J1P30954 320 aa13.23□□□□□ -0.29
CMTM3-203ENST00000460097 APLNRP35414 380 aa13.23□□□□□ -0.29
CMTM3-203ENST00000460097 HERPUD1Q15011 391 aa13.23□□□□□ -0.29
CMTM3-203ENST00000460097 P2RY6Q15077 328 aa13.23□□□□□ -0.29
CMTM3-203ENST00000460097 RSG1Q9BU20 258 aa13.23□□□□□ -0.29
CMTM3-203ENST00000460097 TMEM38BQ9NVV0 291 aa13.23□□□□□ -0.29
CMTM3-203ENST00000460097 IGFBP2P18065 325 aa13.22□□□□□ -0.29
CMTM3-203ENST00000460097 ATP6V1FQ16864 119 aa13.22□□□□□ -0.29
CMTM3-203ENST00000460097 TMEM249Q2WGJ8 235 aa13.22□□□□□ -0.29
CMTM3-203ENST00000460097 PLCXD3Q63HM9 321 aa13.22□□□□□ -0.29
CMTM3-203ENST00000460097 CXorf67Q86X51 503 aaPredicted RBP13.22□□□□□ -0.29
CMTM3-203ENST00000460097 ZNF611Q8N823 705 aa13.22□□□□□ -0.29
CMTM3-203ENST00000460097 SPOCK3Q9BQ16 436 aa13.22□□□□□ -0.29
CMTM3-203ENST00000460097 PLK3Q9H4B4 646 aa13.22□□□□□ -0.29
CMTM3-203ENST00000460097 CCL28Q9NRJ3 127 aa13.22□□□□□ -0.29
CMTM3-203ENST00000460097 CTXND1A0A1B0GTU2 59 aa13.22□□□□□ -0.29
CMTM3-203ENST00000460097 SERPINE2P07093 398 aa13.22□□□□□ -0.29
CMTM3-203ENST00000460097 CD55P08174 381 aa13.22□□□□□ -0.29
CMTM3-203ENST00000460097 LINC00614P0C842 121 aa13.22□□□□□ -0.29
CMTM3-203ENST00000460097 IDH3GP51553 393 aaPredicted RBP13.22□□□□□ -0.29
CMTM3-203ENST00000460097 CNN1P51911 297 aaKnown RBP13.22□□□□□ -0.29
CMTM3-203ENST00000460097 NRN1LQ496H8 165 aa13.22□□□□□ -0.29
CMTM3-203ENST00000460097 SSX7Q7RTT5 188 aa13.22□□□□□ -0.29
CMTM3-203ENST00000460097 TAF15Q92804 592 aaKnown RBP eCLIP13.22□□□□□ -0.29
CMTM3-203ENST00000460097 LHX4Q969G2 390 aa13.22□□□□□ -0.29
CMTM3-203ENST00000460097 VSIRQ9H7M9 311 aa13.22□□□□□ -0.29
CMTM3-203ENST00000460097 SLC39A9Q9NUM3 307 aa13.22□□□□□ -0.29
CMTM3-203ENST00000460097 FKBP11Q9NYL4 201 aa13.22□□□□□ -0.29
CMTM3-203ENST00000460097 PSENENQ9NZ42 101 aa13.22□□□□□ -0.29
CMTM3-203ENST00000460097 OR2W1Q9Y3N9 320 aa13.22□□□□□ -0.29
CMTM3-203ENST00000460097 SCTP09683 121 aa13.21□□□□□ -0.29
CMTM3-203ENST00000460097 UBE2NP61088 152 aaKnown RBP13.21□□□□□ -0.29
CMTM3-203ENST00000460097 ZNF774Q6NX45 483 aa13.21□□□□□ -0.29
CMTM3-203ENST00000460097 ZNF573Q86YE8 665 aa13.21□□□□□ -0.29
CMTM3-203ENST00000460097 MRPL41Q8IXM3 137 aaKnown RBP13.21□□□□□ -0.29
CMTM3-203ENST00000460097 MRPL30Q8TCC3 161 aaKnown RBP13.21□□□□□ -0.29
CMTM3-203ENST00000460097 C20orf144Q9BQM9 153 aa13.21□□□□□ -0.29
CMTM3-203ENST00000460097 C1QTNF5Q9BXJ0 243 aa13.21□□□□□ -0.29
CMTM3-203ENST00000460097 LINC00470Q9BZP3 86 aa13.21□□□□□ -0.29
CMTM3-203ENST00000460097 CBY1Q9Y3M2 126 aa13.21□□□□□ -0.29
CMTM3-203ENST00000460097 PTPN13Q12923 2485 aa13.21□□□□□ -0.3
CMTM3-203ENST00000460097 IGKV1-6A0A0C4DH72 117 aa13.2□□□□□ -0.3
CMTM3-203ENST00000460097 A0A0G2JRQ6 117 aa13.2□□□□□ -0.3
CMTM3-203ENST00000460097 MARCH11A6NNE9 402 aa13.2□□□□□ -0.3
CMTM3-203ENST00000460097 SOX15O60248 233 aa13.2□□□□□ -0.3
CMTM3-203ENST00000460097 COX6B1P14854 86 aa13.2□□□□□ -0.3
CMTM3-203ENST00000460097 IGHV1-2P23083 117 aa13.2□□□□□ -0.3
CMTM3-203ENST00000460097 TMEM267Q0VDI3 215 aaPredicted RBP13.2□□□□□ -0.3
CMTM3-203ENST00000460097 FOXL1Q12952 345 aa13.2□□□□□ -0.3
CMTM3-203ENST00000460097 HAPLN4Q86UW8 402 aa13.2□□□□□ -0.3
CMTM3-203ENST00000460097 LINC01560Q8TB33 94 aa13.2□□□□□ -0.3
CMTM3-203ENST00000460097 PCGF1Q9BSM1 259 aa13.2□□□□□ -0.3
CMTM3-203ENST00000460097 PARLQ9H300 379 aa13.2□□□□□ -0.3
CMTM3-203ENST00000460097 TMPRSS2O15393 492 aa13.2□□□□□ -0.3
CMTM3-203ENST00000460097 MLNRO43193 412 aa13.2□□□□□ -0.3
CMTM3-203ENST00000460097 LYZL6O75951 148 aa13.2□□□□□ -0.3
CMTM3-203ENST00000460097 COX5AP20674 150 aa13.2□□□□□ -0.3
CMTM3-203ENST00000460097 FGF8P55075 233 aaPredicted RBP13.2□□□□□ -0.3
CMTM3-203ENST00000460097 RPL15P61313 204 aaKnown RBP13.2□□□□□ -0.3
CMTM3-203ENST00000460097 RANP62826 216 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms