RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.17■□□□□ 0.18
SRM-202ENST00000459997 LINC01619G3V211 115 aa16.16■□□□□ 0.18
SRM-202ENST00000459997 OVOL1O14753 267 aa16.16■□□□□ 0.18
SRM-202ENST00000459997 ARPC1BO15143 372 aaKnown RBP16.16■□□□□ 0.18
SRM-202ENST00000459997 CNIH1O95406 144 aa16.16■□□□□ 0.18
SRM-202ENST00000459997 IGLV2-23P01705 113 aa16.16■□□□□ 0.18
SRM-202ENST00000459997 IGHV3-11P01762 117 aa16.16■□□□□ 0.18
SRM-202ENST00000459997 DTYMKP23919 212 aa16.16■□□□□ 0.18
SRM-202ENST00000459997 LGALS7P47929 136 aa16.16■□□□□ 0.18
SRM-202ENST00000459997 SLURP1P55000 103 aa16.16■□□□□ 0.18
SRM-202ENST00000459997 RTL8BQ17RB0 113 aa16.16■□□□□ 0.18
SRM-202ENST00000459997 H1FOOQ8IZA3 346 aaPredicted RBP16.16■□□□□ 0.18
SRM-202ENST00000459997 BVESQ8NE79 360 aa16.16■□□□□ 0.18
SRM-202ENST00000459997 RHBDL2Q9NX52 303 aa16.16■□□□□ 0.18
SRM-202ENST00000459997 IGHV4OR15-8A0A075B7B6 117 aa16.15■□□□□ 0.18
SRM-202ENST00000459997 A0A087WW49 117 aa16.15■□□□□ 0.18
SRM-202ENST00000459997 SHOXO15266 292 aa16.15■□□□□ 0.18
SRM-202ENST00000459997 INSL3P51460 131 aa16.15■□□□□ 0.18
SRM-202ENST00000459997 TAGLNQ01995 201 aaKnown RBP16.15■□□□□ 0.18
SRM-202ENST00000459997 PJVKQ0ZLH3 352 aa16.15■□□□□ 0.18
SRM-202ENST00000459997 HACD4Q5VWC8 232 aa16.15■□□□□ 0.18
SRM-202ENST00000459997 DLX4Q92988 240 aaPredicted RBP16.15■□□□□ 0.18
SRM-202ENST00000459997 ST6GALNAC5Q9BVH7 336 aa16.15■□□□□ 0.18
SRM-202ENST00000459997 SLA2Q9H6Q3 261 aa16.15■□□□□ 0.18
SRM-202ENST00000459997 ZNF256Q9Y2P7 627 aaPredicted RBP16.15■□□□□ 0.18
SRM-202ENST00000459997 TMEM235A6NFC5 223 aa16.14■□□□□ 0.17
SRM-202ENST00000459997 TRGV3P03979 118 aa16.14■□□□□ 0.17
SRM-202ENST00000459997 NCS1P62166 190 aa16.14■□□□□ 0.17
SRM-202ENST00000459997 SSBP2P81877 361 aaPredicted RBP16.14■□□□□ 0.17
SRM-202ENST00000459997 TMEM177Q53S58 311 aa16.14■□□□□ 0.17
SRM-202ENST00000459997 NUDCD2Q8WVJ2 157 aa16.14■□□□□ 0.17
SRM-202ENST00000459997 NAA50Q9GZZ1 169 aaKnown RBP16.14■□□□□ 0.17
SRM-202ENST00000459997 ZNF355PQ9NSJ1 428 aa16.14■□□□□ 0.17
SRM-202ENST00000459997 LSM4Q9Y4Z0 139 aaKnown RBP16.14■□□□□ 0.17
SRM-202ENST00000459997 ETV7Q9Y603 341 aa16.14■□□□□ 0.17
SRM-202ENST00000459997 SCGNO76038 276 aa16.13■□□□□ 0.17
SRM-202ENST00000459997 CRYGBP07316 175 aa16.13■□□□□ 0.17
SRM-202ENST00000459997 RRASP10301 218 aa16.13■□□□□ 0.17
SRM-202ENST00000459997 SCAND1P57086 179 aa16.13■□□□□ 0.17
SRM-202ENST00000459997 VBP1P61758 197 aa16.13■□□□□ 0.17
SRM-202ENST00000459997 ZNF429Q86V71 674 aa16.13■□□□□ 0.17
SRM-202ENST00000459997 OR5T1Q8NG75 326 aa16.13■□□□□ 0.17
SRM-202ENST00000459997 ADTRPQ96IZ2 230 aa16.13■□□□□ 0.17
SRM-202ENST00000459997 SRRM4A7MD48 611 aaKnown RBP16.12■□□□□ 0.17
SRM-202ENST00000459997 J3QRK9 145 aa16.12■□□□□ 0.17
SRM-202ENST00000459997 SAP30O75446 220 aa16.12■□□□□ 0.17
SRM-202ENST00000459997 LY86O95711 162 aa16.12■□□□□ 0.17
SRM-202ENST00000459997 HSPB1P04792 205 aaKnown RBP16.12■□□□□ 0.17
SRM-202ENST00000459997 DUTP33316 252 aaKnown RBP16.12■□□□□ 0.17
SRM-202ENST00000459997 GNG2P59768 71 aa16.12■□□□□ 0.17
SRM-202ENST00000459997 PITPNAQ00169 270 aa16.12■□□□□ 0.17
SRM-202ENST00000459997 POC5Q8NA72 575 aa16.12■□□□□ 0.17
SRM-202ENST00000459997 DDB2Q92466 427 aa16.12■□□□□ 0.17
SRM-202ENST00000459997 RHOVQ96L33 236 aa16.12■□□□□ 0.17
SRM-202ENST00000459997 DCSTAMPQ9H295 470 aa16.12■□□□□ 0.17
SRM-202ENST00000459997 SPATA2Q9UM82 520 aa16.12■□□□□ 0.17
SRM-202ENST00000459997 LINC00473A8K010 186 aa16.11■□□□□ 0.17
SRM-202ENST00000459997 SSX5O60225 188 aa16.11■□□□□ 0.17
SRM-202ENST00000459997 CRYZL1O95825 349 aa16.11■□□□□ 0.17
SRM-202ENST00000459997 CTXN2P0C2S0 81 aa16.11■□□□□ 0.17
SRM-202ENST00000459997 NFYAP23511 347 aaPredicted RBP16.11■□□□□ 0.17
SRM-202ENST00000459997 MRPS26Q9BYN8 205 aaKnown RBP16.11■□□□□ 0.17
SRM-202ENST00000459997 DNAH9Q9NYC9 4486 aa16.1■□□□□ 0.17
SRM-202ENST00000459997 TRAV18A0A075B6X5 111 aa16.1■□□□□ 0.17
SRM-202ENST00000459997 H3BUA1 57 aa16.1■□□□□ 0.17
SRM-202ENST00000459997 VMA21Q3ZAQ7 101 aa16.1■□□□□ 0.17
SRM-202ENST00000459997 ZNF645Q8N7E2 425 aa16.1■□□□□ 0.17
SRM-202ENST00000459997 OR2W1Q9Y3N9 320 aa16.1■□□□□ 0.17
SRM-202ENST00000459997 C13orf42A0A1B0GVH6 325 aa16.09■□□□□ 0.17
SRM-202ENST00000459997 UBE2KP61086 200 aa16.09■□□□□ 0.17
SRM-202ENST00000459997 GPR107Q5VW38 600 aa16.09■□□□□ 0.17
SRM-202ENST00000459997 CNIH2Q6PI25 160 aa16.09■□□□□ 0.17
SRM-202ENST00000459997 IDO2Q6ZQW0 420 aa16.09■□□□□ 0.17
SRM-202ENST00000459997 CROCCP3Q8IVE0 287 aa16.09■□□□□ 0.17
SRM-202ENST00000459997 TEX45Q8NA69 505 aa16.09■□□□□ 0.17
SRM-202ENST00000459997 SLC25A46Q96AG3 418 aa16.09■□□□□ 0.17
SRM-202ENST00000459997 TMEM68Q96MH6 324 aa16.09■□□□□ 0.17
SRM-202ENST00000459997 PHB2Q99623 299 aa16.09■□□□□ 0.17
SRM-202ENST00000459997 TMEM127O75204 238 aa16.08■□□□□ 0.16
SRM-202ENST00000459997 HLA-DQB1P01920 261 aa16.08■□□□□ 0.16
SRM-202ENST00000459997 APELAP0DMC3 54 aa16.08■□□□□ 0.16
SRM-202ENST00000459997 PTHLHP12272 177 aa16.08■□□□□ 0.16
SRM-202ENST00000459997 ALDH3B2P48448 385 aa16.08■□□□□ 0.16
SRM-202ENST00000459997 CTF1Q16619 201 aa16.08■□□□□ 0.16
SRM-202ENST00000459997 MRGPRG-AS1Q2M3A8 158 aa16.08■□□□□ 0.16
SRM-202ENST00000459997 ACSM6Q6P461 480 aa16.08■□□□□ 0.16
SRM-202ENST00000459997 ANKRD13BQ86YJ7 626 aa16.08■□□□□ 0.16
SRM-202ENST00000459997 OSR1Q8TAX0 266 aaPredicted RBP16.08■□□□□ 0.16
SRM-202ENST00000459997 ANXA10Q9UJ72 324 aa16.08■□□□□ 0.16
SRM-202ENST00000459997 IGKV1D-13A0A0B4J2D9 117 aa16.07■□□□□ 0.16
SRM-202ENST00000459997 A0A0G2JLM5 398 aa16.07■□□□□ 0.16
SRM-202ENST00000459997 FCGR3BO75015 233 aa16.07■□□□□ 0.16
SRM-202ENST00000459997 TUSC2O75896 110 aa16.07■□□□□ 0.16
SRM-202ENST00000459997 GABARAPO95166 117 aa16.07■□□□□ 0.16
SRM-202ENST00000459997 NHLRC4P0CG21 123 aaPredicted RBP16.07■□□□□ 0.16
SRM-202ENST00000459997 IGKV1-13P0DP09 117 aa16.07■□□□□ 0.16
SRM-202ENST00000459997 TNXAQ16473 311 aa16.07■□□□□ 0.16
SRM-202ENST00000459997 PRSS8Q16651 343 aa16.07■□□□□ 0.16
SRM-202ENST00000459997 KCTD9Q7L273 389 aa16.07■□□□□ 0.16
SRM-202ENST00000459997 SAMD12Q8N8I0 201 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms