RNA–Protein interactions for RNA: ENST00000458657.6

C1orf228-218, Transcript of Uncharacterized protein C1orf228, human

APPRIS P2 TSL 5 BASIC

Gene C1orf228, Length 1,818 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1orf228-218	ENST00000458657	FOXH1	O75593	365 aa		11.88	□□□□□ -0.51
C1orf228-218	ENST00000458657	IL3RA	P26951	378 aa		11.88	□□□□□ -0.51
C1orf228-218	ENST00000458657	ZNF137P	P52743	207 aa		11.88	□□□□□ -0.51
C1orf228-218	ENST00000458657	SSX9	Q7RTT3	188 aa		11.88	□□□□□ -0.51
C1orf228-218	ENST00000458657	VKORC1L1	Q8N0U8	176 aa		11.88	□□□□□ -0.51
C1orf228-218	ENST00000458657	BEND2	Q8NDZ0	799 aa		11.88	□□□□□ -0.51
C1orf228-218	ENST00000458657	OR4P4	Q8NGL7	312 aa		11.88	□□□□□ -0.51
C1orf228-218	ENST00000458657	OR13D1	Q8NGV5	346 aa		11.88	□□□□□ -0.51
C1orf228-218	ENST00000458657	MED13L	Q71F56	2210 aa		11.87	□□□□□ -0.51
C1orf228-218	ENST00000458657	BUB1B-PAK6	H3BSN5	160 aa		11.87	□□□□□ -0.51
C1orf228-218	ENST00000458657	ST8SIA3	O43173	380 aa		11.87	□□□□□ -0.51
C1orf228-218	ENST00000458657	PITX3	O75364	302 aa		11.87	□□□□□ -0.51
C1orf228-218	ENST00000458657	ATG12	O94817	140 aa		11.87	□□□□□ -0.51
C1orf228-218	ENST00000458657	ARG1	P05089	322 aa		11.87	□□□□□ -0.51
C1orf228-218	ENST00000458657		P0C879	139 aa		11.87	□□□□□ -0.51
C1orf228-218	ENST00000458657	SLC25A6	P12236	298 aa		11.87	□□□□□ -0.51
C1orf228-218	ENST00000458657	LYL1	P12980	280 aa		11.87	□□□□□ -0.51
C1orf228-218	ENST00000458657	PRTN3	P24158	256 aa		11.87	□□□□□ -0.51
C1orf228-218	ENST00000458657	DSCR9	P59020	149 aa		11.87	□□□□□ -0.51
C1orf228-218	ENST00000458657	POLR2G	P62487	172 aa	Known RBP eCLIP	11.87	□□□□□ -0.51
C1orf228-218	ENST00000458657	FAM71F2	Q6NXP2	309 aa		11.87	□□□□□ -0.51
C1orf228-218	ENST00000458657	H2BFWT	Q7Z2G1	175 aa		11.87	□□□□□ -0.51
C1orf228-218	ENST00000458657	TGIF2LX	Q8IUE1	241 aa		11.87	□□□□□ -0.51
C1orf228-218	ENST00000458657	DMBX1	Q8NFW5	382 aa		11.87	□□□□□ -0.51
C1orf228-218	ENST00000458657	PCGF1	Q9BSM1	259 aa		11.87	□□□□□ -0.51
C1orf228-218	ENST00000458657	SIRPD	Q9H106	197 aa		11.87	□□□□□ -0.51
C1orf228-218	ENST00000458657	SLC35D1	Q9NTN3	355 aa		11.87	□□□□□ -0.51
C1orf228-218	ENST00000458657	RCL1	Q9Y2P8	373 aa	Known RBP	11.87	□□□□□ -0.51
C1orf228-218	ENST00000458657	KPTN	Q9Y664	436 aa		11.87	□□□□□ -0.51
C1orf228-218	ENST00000458657	POMT1	Q9Y6A1	747 aa		11.87	□□□□□ -0.51
C1orf228-218	ENST00000458657	PTPN13	Q12923	2485 aa		11.87	□□□□□ -0.51
C1orf228-218	ENST00000458657	POLQ	O75417	2590 aa		11.87	□□□□□ -0.51
C1orf228-218	ENST00000458657	SSSCA1	O60232	199 aa		11.86	□□□□□ -0.51
C1orf228-218	ENST00000458657	RLN2	P04090	185 aa		11.86	□□□□□ -0.51
C1orf228-218	ENST00000458657	IGKV1-16	P04430	117 aa		11.86	□□□□□ -0.51
C1orf228-218	ENST00000458657	IFITM2	Q01629	132 aa		11.86	□□□□□ -0.51
C1orf228-218	ENST00000458657	RTL8B	Q17RB0	113 aa		11.86	□□□□□ -0.51
C1orf228-218	ENST00000458657	HCP5	Q6MZN7	132 aa		11.86	□□□□□ -0.51
C1orf228-218	ENST00000458657	TMUB2	Q71RG4	321 aa		11.86	□□□□□ -0.51
C1orf228-218	ENST00000458657	INO80E	Q8NBZ0	244 aa	Predicted RBP	11.86	□□□□□ -0.51
C1orf228-218	ENST00000458657	NABP2	Q9BQ15	211 aa		11.86	□□□□□ -0.51
C1orf228-218	ENST00000458657	ARL6	Q9H0F7	186 aa		11.86	□□□□□ -0.51
C1orf228-218	ENST00000458657	WNK2	Q9Y3S1	2297 aa		11.86	□□□□□ -0.51
C1orf228-218	ENST00000458657		A0A1W2PRD5	423 aa		11.86	□□□□□ -0.51
C1orf228-218	ENST00000458657		A0A1W2PRF3	423 aa		11.86	□□□□□ -0.51
C1orf228-218	ENST00000458657		A0A1W2PRM7	423 aa		11.86	□□□□□ -0.51
C1orf228-218	ENST00000458657	MSGN1	A6NI15	193 aa		11.86	□□□□□ -0.51
C1orf228-218	ENST00000458657		H0YJW9	148 aa		11.86	□□□□□ -0.51
C1orf228-218	ENST00000458657		H7C2Y5	167 aa		11.86	□□□□□ -0.51
C1orf228-218	ENST00000458657	APOA2	P02652	100 aa		11.86	□□□□□ -0.51
C1orf228-218	ENST00000458657	ERVK-16	P61578	105 aa		11.86	□□□□□ -0.51
C1orf228-218	ENST00000458657	DEFB113	Q30KQ7	82 aa		11.86	□□□□□ -0.51
C1orf228-218	ENST00000458657	C1orf122	Q6ZSJ8	110 aa		11.86	□□□□□ -0.51
C1orf228-218	ENST00000458657	OR11H6	Q8NGC7	330 aa		11.86	□□□□□ -0.51
C1orf228-218	ENST00000458657	ZFP57	Q9NU63	452 aa		11.86	□□□□□ -0.51
C1orf228-218	ENST00000458657	BEX4	Q9NWD9	120 aa	Predicted RBP	11.86	□□□□□ -0.51
C1orf228-218	ENST00000458657	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	11.86	□□□□□ -0.51
C1orf228-218	ENST00000458657	ABCA12	Q86UK0	2595 aa		11.85	□□□□□ -0.51
C1orf228-218	ENST00000458657	TOX4	O94842	621 aa		11.85	□□□□□ -0.51
C1orf228-218	ENST00000458657	NQO2	P16083	231 aa		11.85	□□□□□ -0.51
C1orf228-218	ENST00000458657	HOXB4	P17483	251 aa	Predicted RBP	11.85	□□□□□ -0.51
C1orf228-218	ENST00000458657	S100A11	P31949	105 aa		11.85	□□□□□ -0.51
C1orf228-218	ENST00000458657	DVL1P1	P54792	670 aa	Predicted RBP	11.85	□□□□□ -0.51
C1orf228-218	ENST00000458657	ID3	Q02535	119 aa		11.85	□□□□□ -0.51
C1orf228-218	ENST00000458657	OPCML	Q14982	345 aa		11.85	□□□□□ -0.51
C1orf228-218	ENST00000458657	MIDN	Q504T8	468 aa		11.85	□□□□□ -0.51
C1orf228-218	ENST00000458657	LDLRAD2	Q5SZI1	272 aa		11.85	□□□□□ -0.51
C1orf228-218	ENST00000458657	ACOT7L	Q6ZUV0	252 aa		11.85	□□□□□ -0.51
C1orf228-218	ENST00000458657	OR5AN1	Q8NGI8	311 aa		11.85	□□□□□ -0.51
C1orf228-218	ENST00000458657	HEXA-AS1	Q9H8Q6	139 aa		11.85	□□□□□ -0.51
C1orf228-218	ENST00000458657	NSG2	Q9Y328	171 aa		11.85	□□□□□ -0.51
C1orf228-218	ENST00000458657	GCN1	Q92616	2671 aa	Known RBP	11.84	□□□□□ -0.51
C1orf228-218	ENST00000458657	RNASEK-C17orf49	H0YIS7	233 aa		11.84	□□□□□ -0.51
C1orf228-218	ENST00000458657	OR9G9	P0C7N8	305 aa		11.84	□□□□□ -0.51
C1orf228-218	ENST00000458657	MMP9	P14780	707 aa		11.84	□□□□□ -0.51
C1orf228-218	ENST00000458657	SLC25A16	P16260	332 aa		11.84	□□□□□ -0.51
C1orf228-218	ENST00000458657	OR2B8P	P59922	312 aa		11.84	□□□□□ -0.51
C1orf228-218	ENST00000458657	ZNF345	Q14585	488 aa		11.84	□□□□□ -0.51
C1orf228-218	ENST00000458657	RPE	Q96AT9	228 aa		11.84	□□□□□ -0.51
C1orf228-218	ENST00000458657	TMEM140	Q9NV12	185 aa		11.84	□□□□□ -0.51
C1orf228-218	ENST00000458657	COA4	Q9NYJ1	87 aa		11.84	□□□□□ -0.51
C1orf228-218	ENST00000458657	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	11.84	□□□□□ -0.51
C1orf228-218	ENST00000458657	IGHV3-72	A0A0B4J1Y9	119 aa		11.83	□□□□□ -0.51
C1orf228-218	ENST00000458657	ODF3B	A8MYP8	253 aa		11.83	□□□□□ -0.51
C1orf228-218	ENST00000458657		E5RGE8	158 aa		11.83	□□□□□ -0.51
C1orf228-218	ENST00000458657	WRB	O00258	174 aa		11.83	□□□□□ -0.51
C1orf228-218	ENST00000458657	RBMXL2	O75526	392 aa	Known RBP	11.83	□□□□□ -0.51
C1orf228-218	ENST00000458657	OR2F2	O95006	317 aa		11.83	□□□□□ -0.51
C1orf228-218	ENST00000458657	USF1	P22415	310 aa	Predicted RBP	11.83	□□□□□ -0.51
C1orf228-218	ENST00000458657	NUP62	P37198	522 aa	Predicted RBP	11.83	□□□□□ -0.51
C1orf228-218	ENST00000458657	OR2F1	Q13607	317 aa		11.83	□□□□□ -0.51
C1orf228-218	ENST00000458657	DHRS7B	Q6IAN0	325 aa	Predicted RBP	11.83	□□□□□ -0.51
C1orf228-218	ENST00000458657	KCNRG	Q8N5I3	272 aa		11.83	□□□□□ -0.51
C1orf228-218	ENST00000458657	RHOV	Q96L33	236 aa		11.83	□□□□□ -0.51
C1orf228-218	ENST00000458657	TBX15	Q96SF7	602 aa		11.83	□□□□□ -0.51
C1orf228-218	ENST00000458657	UNKL	Q9H9P5	680 aa	Known RBP	11.83	□□□□□ -0.51
C1orf228-218	ENST00000458657	APC	P25054	2843 aa		11.83	□□□□□ -0.52
C1orf228-218	ENST00000458657	IGHV1-3	A0A0C4DH29	117 aa		11.83	□□□□□ -0.52
C1orf228-218	ENST00000458657		A0A0D9SG52	128 aa		11.83	□□□□□ -0.52
C1orf228-218	ENST00000458657	LY6L	H3BQJ8	138 aa		11.83	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms