RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 IGKV1D-8A0A087WSZ0 117 aa13.85□□□□□ -0.19
MSH6-207ENST00000456246 LINC01619G3V211 115 aa13.85□□□□□ -0.19
MSH6-207ENST00000456246 DUTP33316 252 aaKnown RBP13.85□□□□□ -0.19
MSH6-207ENST00000456246 TPPP2P59282 170 aa13.85□□□□□ -0.19
MSH6-207ENST00000456246 MXD1Q05195 221 aa13.85□□□□□ -0.19
MSH6-207ENST00000456246 CROCCP3Q8IVE0 287 aa13.85□□□□□ -0.19
MSH6-207ENST00000456246 BVESQ8NE79 360 aa13.85□□□□□ -0.19
MSH6-207ENST00000456246 GRPEL2Q8TAA5 225 aa13.85□□□□□ -0.19
MSH6-207ENST00000456246 OSR1Q8TAX0 266 aaPredicted RBP13.85□□□□□ -0.19
MSH6-207ENST00000456246 NUDCD2Q8WVJ2 157 aa13.85□□□□□ -0.19
MSH6-207ENST00000456246 DDB2Q92466 427 aa13.85□□□□□ -0.19
MSH6-207ENST00000456246 C5orf30Q96GV9 206 aa13.85□□□□□ -0.19
MSH6-207ENST00000456246 TPSG1Q9NRR2 321 aa13.85□□□□□ -0.19
MSH6-207ENST00000456246 CREBL2O60519 120 aaPredicted RBP13.84□□□□□ -0.19
MSH6-207ENST00000456246 HLA-DQB1P01920 261 aa13.84□□□□□ -0.19
MSH6-207ENST00000456246 CRYGBP07316 175 aa13.84□□□□□ -0.19
MSH6-207ENST00000456246 UBE2KP61086 200 aa13.84□□□□□ -0.19
MSH6-207ENST00000456246 ASPHD1Q5U4P2 390 aa13.84□□□□□ -0.19
MSH6-207ENST00000456246 TEX45Q8NA69 505 aa13.84□□□□□ -0.19
MSH6-207ENST00000456246 POC5Q8NA72 575 aa13.84□□□□□ -0.19
MSH6-207ENST00000456246 B9D2Q9BPU9 175 aa13.84□□□□□ -0.19
MSH6-207ENST00000456246 ANXA10Q9UJ72 324 aa13.84□□□□□ -0.19
MSH6-207ENST00000456246 PRELID3BQ9Y3B1 194 aa13.84□□□□□ -0.19
MSH6-207ENST00000456246 A0A0G2JLM5 398 aa13.83□□□□□ -0.2
MSH6-207ENST00000456246 OVOL1O14753 267 aa13.83□□□□□ -0.2
MSH6-207ENST00000456246 BRI3O95415 125 aa13.83□□□□□ -0.2
MSH6-207ENST00000456246 CD69Q07108 199 aa13.83□□□□□ -0.2
MSH6-207ENST00000456246 IDNKQ5T6J7 187 aa13.83□□□□□ -0.2
MSH6-207ENST00000456246 ZNF429Q86V71 674 aa13.83□□□□□ -0.2
MSH6-207ENST00000456246 DIABLOQ9NR28 239 aa13.83□□□□□ -0.2
MSH6-207ENST00000456246 SCOCQ9UIL1 159 aa13.83□□□□□ -0.2
MSH6-207ENST00000456246 MRPS7Q9Y2R9 242 aaKnown RBP13.83□□□□□ -0.2
MSH6-207ENST00000456246 A0A087WXM4 84 aa13.82□□□□□ -0.2
MSH6-207ENST00000456246 TNFAIP8O95379 198 aa13.82□□□□□ -0.2
MSH6-207ENST00000456246 CRYZL1O95825 349 aa13.82□□□□□ -0.2
MSH6-207ENST00000456246 TRGV3P03979 118 aa13.82□□□□□ -0.2
MSH6-207ENST00000456246 HSPB1P04792 205 aaKnown RBP13.82□□□□□ -0.2
MSH6-207ENST00000456246 CLEC2LP0C7M8 214 aa13.82□□□□□ -0.2
MSH6-207ENST00000456246 KCTD9Q7L273 389 aa13.82□□□□□ -0.2
MSH6-207ENST00000456246 DCUN1D4Q92564 292 aa13.82□□□□□ -0.2
MSH6-207ENST00000456246 SLC25A38Q96DW6 304 aa13.82□□□□□ -0.2
MSH6-207ENST00000456246 RHOVQ96L33 236 aa13.82□□□□□ -0.2
MSH6-207ENST00000456246 RNF167Q9H6Y7 350 aa13.82□□□□□ -0.2
MSH6-207ENST00000456246 SPATA2Q9UM82 520 aa13.82□□□□□ -0.2
MSH6-207ENST00000456246 RBMX2Q9Y388 322 aaKnown RBP13.82□□□□□ -0.2
MSH6-207ENST00000456246 TRAV18A0A075B6X5 111 aa13.81□□□□□ -0.2
MSH6-207ENST00000456246 LINC00473A8K010 186 aa13.81□□□□□ -0.2
MSH6-207ENST00000456246 SSX5O60225 188 aa13.81□□□□□ -0.2
MSH6-207ENST00000456246 NFYAP23511 347 aaPredicted RBP13.81□□□□□ -0.2
MSH6-207ENST00000456246 ECI1P42126 302 aa13.81□□□□□ -0.2
MSH6-207ENST00000456246 ARPC4P59998 168 aa13.81□□□□□ -0.2
MSH6-207ENST00000456246 SSBP2P81877 361 aaPredicted RBP13.81□□□□□ -0.2
MSH6-207ENST00000456246 OVCH2Q7RTZ1 564 aa13.81□□□□□ -0.2
MSH6-207ENST00000456246 OR5H6Q8NGV6 325 aa13.81□□□□□ -0.2
MSH6-207ENST00000456246 CASTOR1Q8WTX7 329 aa13.81□□□□□ -0.2
MSH6-207ENST00000456246 MS4A10Q96PG2 267 aa13.81□□□□□ -0.2
MSH6-207ENST00000456246 HSD17B10Q99714 261 aaKnown RBP13.81□□□□□ -0.2
MSH6-207ENST00000456246 ALX4Q9H161 411 aaPredicted RBP13.81□□□□□ -0.2
MSH6-207ENST00000456246 ZNF355PQ9NSJ1 428 aa13.81□□□□□ -0.2
MSH6-207ENST00000456246 ZNF256Q9Y2P7 627 aaPredicted RBP13.81□□□□□ -0.2
MSH6-207ENST00000456246 IGHV4OR15-8A0A075B7B6 117 aa13.8□□□□□ -0.2
MSH6-207ENST00000456246 A0A087WW49 117 aa13.8□□□□□ -0.2
MSH6-207ENST00000456246 C13orf42A0A1B0GVH6 325 aa13.8□□□□□ -0.2
MSH6-207ENST00000456246 SRRM4A7MD48 611 aaKnown RBP13.8□□□□□ -0.2
MSH6-207ENST00000456246 TUSC2O75896 110 aa13.8□□□□□ -0.2
MSH6-207ENST00000456246 AADACP22760 399 aa13.8□□□□□ -0.2
MSH6-207ENST00000456246 CBX5P45973 191 aa13.8□□□□□ -0.2
MSH6-207ENST00000456246 PJVKQ0ZLH3 352 aa13.8□□□□□ -0.2
MSH6-207ENST00000456246 MSMO1Q15800 293 aa13.8□□□□□ -0.2
MSH6-207ENST00000456246 PRSS8Q16651 343 aa13.8□□□□□ -0.2
MSH6-207ENST00000456246 BEST4Q8NFU0 473 aa13.8□□□□□ -0.2
MSH6-207ENST00000456246 SORL1Q92673 2214 aa13.79□□□□□ -0.2
MSH6-207ENST00000456246 AIREO43918 545 aa13.79□□□□□ -0.2
MSH6-207ENST00000456246 FCGR3BO75015 233 aa13.79□□□□□ -0.2
MSH6-207ENST00000456246 ACTL6BO94805 426 aa13.79□□□□□ -0.2
MSH6-207ENST00000456246 IGHV3-11P01762 117 aa13.79□□□□□ -0.2
MSH6-207ENST00000456246 ZP3P21754 424 aa13.79□□□□□ -0.2
MSH6-207ENST00000456246 SLURP1P55000 103 aa13.79□□□□□ -0.2
MSH6-207ENST00000456246 CDK10Q15131 360 aa13.79□□□□□ -0.2
MSH6-207ENST00000456246 HOGA1Q86XE5 327 aa13.79□□□□□ -0.2
MSH6-207ENST00000456246 TSPAN14Q8NG11 270 aa13.79□□□□□ -0.2
MSH6-207ENST00000456246 OR5T1Q8NG75 326 aa13.79□□□□□ -0.2
MSH6-207ENST00000456246 OR4S2Q8NH73 311 aa13.79□□□□□ -0.2
MSH6-207ENST00000456246 VSTM2AQ8TAG5 236 aa13.79□□□□□ -0.2
MSH6-207ENST00000456246 DLX4Q92988 240 aaPredicted RBP13.79□□□□□ -0.2
MSH6-207ENST00000456246 PHB2Q99623 299 aa13.79□□□□□ -0.2
MSH6-207ENST00000456246 DCUN1D5Q9BTE7 237 aa13.79□□□□□ -0.2
MSH6-207ENST00000456246 AUNIPQ9H7T9 357 aa13.79□□□□□ -0.2
MSH6-207ENST00000456246 RANGRFQ9HD47 186 aaPredicted RBP13.79□□□□□ -0.2
MSH6-207ENST00000456246 TNCP24821 2201 aa13.78□□□□□ -0.2
MSH6-207ENST00000456246 J3QRK9 145 aa13.78□□□□□ -0.2
MSH6-207ENST00000456246 SAP30O75446 220 aa13.78□□□□□ -0.2
MSH6-207ENST00000456246 SAA1P0DJI8 122 aaPredicted RBP13.78□□□□□ -0.2
MSH6-207ENST00000456246 TNXAQ16473 311 aa13.78□□□□□ -0.2
MSH6-207ENST00000456246 VAX1Q5SQQ9 334 aa13.78□□□□□ -0.2
MSH6-207ENST00000456246 ACSM6Q6P461 480 aa13.78□□□□□ -0.2
MSH6-207ENST00000456246 ZNF66Q6ZN08 573 aa13.78□□□□□ -0.2
MSH6-207ENST00000456246 MMD2Q8IY49 270 aa13.78□□□□□ -0.2
MSH6-207ENST00000456246 OR6Q1Q8NGQ2 317 aa13.78□□□□□ -0.2
MSH6-207ENST00000456246 USMG5Q96IX5 58 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms