RNA–Protein interactions for RNA: ENST00000454354.1

USP40-210, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-210ENST00000454354 OR5B12Q96R08 314 aa9.32□□□□□ -0.92
USP40-210ENST00000454354 RBM7Q9Y580 266 aaKnown RBP9.32□□□□□ -0.92
USP40-210ENST00000454354 ETV7Q9Y603 341 aa9.32□□□□□ -0.92
USP40-210ENST00000454354 A0A0A6YYH2 397 aa9.31□□□□□ -0.92
USP40-210ENST00000454354 LOC100506127A0A0U1RQW1 187 aa9.31□□□□□ -0.92
USP40-210ENST00000454354 A6NJ64 397 aa9.31□□□□□ -0.92
USP40-210ENST00000454354 LINC00473A8K010 186 aa9.31□□□□□ -0.92
USP40-210ENST00000454354 LINC01619G3V211 115 aa9.31□□□□□ -0.92
USP40-210ENST00000454354 HLA-DQB1P01920 261 aa9.31□□□□□ -0.92
USP40-210ENST00000454354 INSL3P51460 131 aa9.31□□□□□ -0.92
USP40-210ENST00000454354 GNG2P59768 71 aa9.31□□□□□ -0.92
USP40-210ENST00000454354 MXD1Q05195 221 aa9.31□□□□□ -0.92
USP40-210ENST00000454354 FXYD3Q14802 87 aa9.31□□□□□ -0.92
USP40-210ENST00000454354 MRGPRG-AS1Q2M3A8 158 aa9.31□□□□□ -0.92
USP40-210ENST00000454354 DEFB121Q5J5C9 76 aa9.31□□□□□ -0.92
USP40-210ENST00000454354 CNIH2Q6PI25 160 aa9.31□□□□□ -0.92
USP40-210ENST00000454354 OR5H6Q8NGV6 325 aa9.31□□□□□ -0.92
USP40-210ENST00000454354 CASTOR1Q8WTX7 329 aa9.31□□□□□ -0.92
USP40-210ENST00000454354 TMEM68Q96MH6 324 aa9.31□□□□□ -0.92
USP40-210ENST00000454354 B9D2Q9BPU9 175 aa9.31□□□□□ -0.92
USP40-210ENST00000454354 ST6GALNAC5Q9BVH7 336 aa9.31□□□□□ -0.92
USP40-210ENST00000454354 ALX4Q9H161 411 aaPredicted RBP9.31□□□□□ -0.92
USP40-210ENST00000454354 ANXA10Q9UJ72 324 aa9.31□□□□□ -0.92
USP40-210ENST00000454354 OR2W1Q9Y3N9 320 aa9.31□□□□□ -0.92
USP40-210ENST00000454354 IGHV4OR15-8A0A075B7B6 117 aa9.3□□□□□ -0.92
USP40-210ENST00000454354 A0A087WW49 117 aa9.3□□□□□ -0.92
USP40-210ENST00000454354 SRRM4A7MD48 611 aaKnown RBP9.3□□□□□ -0.92
USP40-210ENST00000454354 OVOL1O14753 267 aa9.3□□□□□ -0.92
USP40-210ENST00000454354 SHOXO15266 292 aa9.3□□□□□ -0.92
USP40-210ENST00000454354 TUSC2O75896 110 aa9.3□□□□□ -0.92
USP40-210ENST00000454354 SLC22A5O76082 557 aa9.3□□□□□ -0.92
USP40-210ENST00000454354 BRI3O95415 125 aa9.3□□□□□ -0.92
USP40-210ENST00000454354 CD40LGP29965 261 aa9.3□□□□□ -0.92
USP40-210ENST00000454354 UBE2KP61086 200 aa9.3□□□□□ -0.92
USP40-210ENST00000454354 PJVKQ0ZLH3 352 aa9.3□□□□□ -0.92
USP40-210ENST00000454354 OVCH2Q7RTZ1 564 aa9.3□□□□□ -0.92
USP40-210ENST00000454354 ZNF429Q86V71 674 aa9.3□□□□□ -0.92
USP40-210ENST00000454354 POC5Q8NA72 575 aa9.3□□□□□ -0.92
USP40-210ENST00000454354 GRPEL2Q8TAA5 225 aa9.3□□□□□ -0.92
USP40-210ENST00000454354 OSR1Q8TAX0 266 aaPredicted RBP9.3□□□□□ -0.92
USP40-210ENST00000454354 DCUN1D4Q92564 292 aa9.3□□□□□ -0.92
USP40-210ENST00000454354 RHOVQ96L33 236 aa9.3□□□□□ -0.92
USP40-210ENST00000454354 LSM4Q9Y4Z0 139 aaKnown RBP9.3□□□□□ -0.92
USP40-210ENST00000454354 IGKV1D-13A0A0B4J2D9 117 aa9.29□□□□□ -0.92
USP40-210ENST00000454354 CNIH1O95406 144 aa9.29□□□□□ -0.92
USP40-210ENST00000454354 CRYZL1O95825 349 aa9.29□□□□□ -0.92
USP40-210ENST00000454354 IGLV2-14P01704 120 aa9.29□□□□□ -0.92
USP40-210ENST00000454354 TRGV3P03979 118 aa9.29□□□□□ -0.92
USP40-210ENST00000454354 IGKV1-13P0DP09 117 aa9.29□□□□□ -0.92
USP40-210ENST00000454354 NFYAP23511 347 aaPredicted RBP9.29□□□□□ -0.92
USP40-210ENST00000454354 SLURP1P55000 103 aa9.29□□□□□ -0.92
USP40-210ENST00000454354 TPPP2P59282 170 aa9.29□□□□□ -0.92
USP40-210ENST00000454354 EIF4EBP1Q13541 118 aaPredicted RBP9.29□□□□□ -0.92
USP40-210ENST00000454354 VMA21Q3ZAQ7 101 aa9.29□□□□□ -0.92
USP40-210ENST00000454354 TIMM50Q3ZCQ8 353 aa9.29□□□□□ -0.92
USP40-210ENST00000454354 IDNKQ5T6J7 187 aa9.29□□□□□ -0.92
USP40-210ENST00000454354 TEX45Q8NA69 505 aa9.29□□□□□ -0.92
USP40-210ENST00000454354 DLX4Q92988 240 aaPredicted RBP9.29□□□□□ -0.92
USP40-210ENST00000454354 MS4A10Q96PG2 267 aa9.29□□□□□ -0.92
USP40-210ENST00000454354 SPATA2Q9UM82 520 aa9.29□□□□□ -0.92
USP40-210ENST00000454354 RBMX2Q9Y388 322 aaKnown RBP9.29□□□□□ -0.92
USP40-210ENST00000454354 TRAV18A0A075B6X5 111 aa9.28□□□□□ -0.92
USP40-210ENST00000454354 IGHV3-11P01762 117 aa9.28□□□□□ -0.92
USP40-210ENST00000454354 HSPB1P04792 205 aaKnown RBP9.28□□□□□ -0.92
USP40-210ENST00000454354 ECI1P42126 302 aa9.28□□□□□ -0.92
USP40-210ENST00000454354 CD69Q07108 199 aa9.28□□□□□ -0.92
USP40-210ENST00000454354 PRSS8Q16651 343 aa9.28□□□□□ -0.92
USP40-210ENST00000454354 KCTD9Q7L273 389 aa9.28□□□□□ -0.92
USP40-210ENST00000454354 HOGA1Q86XE5 327 aa9.28□□□□□ -0.92
USP40-210ENST00000454354 CROCCP3Q8IVE0 287 aa9.28□□□□□ -0.92
USP40-210ENST00000454354 YIPF6Q96EC8 236 aa9.28□□□□□ -0.92
USP40-210ENST00000454354 PRR25Q96S07 402 aa9.28□□□□□ -0.92
USP40-210ENST00000454354 AUNIPQ9H7T9 357 aa9.28□□□□□ -0.92
USP40-210ENST00000454354 ZNF256Q9Y2P7 627 aaPredicted RBP9.28□□□□□ -0.92
USP40-210ENST00000454354 A0A087WXM4 84 aa9.27□□□□□ -0.93
USP40-210ENST00000454354 A0A0G2JLM5 398 aa9.27□□□□□ -0.93
USP40-210ENST00000454354 AIREO43918 545 aa9.27□□□□□ -0.93
USP40-210ENST00000454354 TNFAIP8O95379 198 aa9.27□□□□□ -0.93
USP40-210ENST00000454354 SAA1P0DJI8 122 aaPredicted RBP9.27□□□□□ -0.93
USP40-210ENST00000454354 AADACP22760 399 aa9.27□□□□□ -0.93
USP40-210ENST00000454354 TGFBR1P36897 503 aa9.27□□□□□ -0.93
USP40-210ENST00000454354 RPL30P62888 115 aaKnown RBP9.27□□□□□ -0.93
USP40-210ENST00000454354 CDK10Q15131 360 aa9.27□□□□□ -0.93
USP40-210ENST00000454354 MSMO1Q15800 293 aa9.27□□□□□ -0.93
USP40-210ENST00000454354 ACSM6Q6P461 480 aa9.27□□□□□ -0.93
USP40-210ENST00000454354 BEST4Q8NFU0 473 aa9.27□□□□□ -0.93
USP40-210ENST00000454354 TSPAN14Q8NG11 270 aa9.27□□□□□ -0.93
USP40-210ENST00000454354 OR5T1Q8NG75 326 aa9.27□□□□□ -0.93
USP40-210ENST00000454354 HSD17B10Q99714 261 aaKnown RBP9.27□□□□□ -0.93
USP40-210ENST00000454354 TINAGL1Q9GZM7 467 aaPredicted RBP9.27□□□□□ -0.93
USP40-210ENST00000454354 DIABLOQ9NR28 239 aa9.27□□□□□ -0.93
USP40-210ENST00000454354 PRELID3BQ9Y3B1 194 aa9.27□□□□□ -0.93
USP40-210ENST00000454354 C13orf42A0A1B0GVH6 325 aa9.26□□□□□ -0.93
USP40-210ENST00000454354 TRIM64CA6NLI5 447 aa9.26□□□□□ -0.93
USP40-210ENST00000454354 J3QRK9 145 aa9.26□□□□□ -0.93
USP40-210ENST00000454354 CREBL2O60519 120 aaPredicted RBP9.26□□□□□ -0.93
USP40-210ENST00000454354 FCGR3BO75015 233 aa9.26□□□□□ -0.93
USP40-210ENST00000454354 SAP30O75446 220 aa9.26□□□□□ -0.93
USP40-210ENST00000454354 ARPC4P59998 168 aa9.26□□□□□ -0.93
USP40-210ENST00000454354 VAX1Q5SQQ9 334 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms