RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 OR10D4PQ8NGN7 298 aa13.21□□□□□ -0.29
SNX17-204ENST00000453453 C14orf144Q96I85 54 aa13.21□□□□□ -0.29
SNX17-204ENST00000453453 RARRES2Q99969 163 aa13.21□□□□□ -0.29
SNX17-204ENST00000453453 CTDSP1Q9GZU7 261 aa13.21□□□□□ -0.29
SNX17-204ENST00000453453 TMEM222Q9H0R3 208 aa13.21□□□□□ -0.29
SNX17-204ENST00000453453 WIPI2Q9Y4P8 454 aa13.21□□□□□ -0.29
SNX17-204ENST00000453453 MMP24Q9Y5R2 645 aa13.21□□□□□ -0.29
SNX17-204ENST00000453453 LRRK2Q5S007 2527 aa13.21□□□□□ -0.29
SNX17-204ENST00000453453 TRBV24-1A0A075B6N3 115 aa13.21□□□□□ -0.3
SNX17-204ENST00000453453 LOC102723971A0A1B0GUV8 181 aa13.21□□□□□ -0.3
SNX17-204ENST00000453453 IGSF23A1L1A6 192 aa13.21□□□□□ -0.3
SNX17-204ENST00000453453 CXCL1P09341 107 aa13.21□□□□□ -0.3
SNX17-204ENST00000453453 EGR1P18146 543 aa13.21□□□□□ -0.3
SNX17-204ENST00000453453 VAMP2P63027 116 aa13.21□□□□□ -0.3
SNX17-204ENST00000453453 SP6Q3SY56 376 aa13.21□□□□□ -0.3
SNX17-204ENST00000453453 CLDND2Q8NHS1 167 aa13.21□□□□□ -0.3
SNX17-204ENST00000453453 RNASEH2CQ8TDP1 164 aaKnown RBP13.21□□□□□ -0.3
SNX17-204ENST00000453453 CCL17Q92583 94 aa13.21□□□□□ -0.3
SNX17-204ENST00000453453 HDHD3Q9BSH5 251 aaPredicted RBP13.21□□□□□ -0.3
SNX17-204ENST00000453453 FAAP24Q9BTP7 215 aa13.21□□□□□ -0.3
SNX17-204ENST00000453453 TMEM106BQ9NUM4 274 aa13.21□□□□□ -0.3
SNX17-204ENST00000453453 RNF150Q9ULK6 438 aa13.21□□□□□ -0.3
SNX17-204ENST00000453453 SIRPB1O00241 398 aa13.2□□□□□ -0.3
SNX17-204ENST00000453453 DVL1O14640 695 aa13.2□□□□□ -0.3
SNX17-204ENST00000453453 SLC31A2O15432 143 aa13.2□□□□□ -0.3
SNX17-204ENST00000453453 MPPED1O15442 326 aa13.2□□□□□ -0.3
SNX17-204ENST00000453453 PHF1O43189 567 aaPredicted RBP13.2□□□□□ -0.3
SNX17-204ENST00000453453 OR2H2O95918 312 aa13.2□□□□□ -0.3
SNX17-204ENST00000453453 PMS2P11Q13670 270 aa13.2□□□□□ -0.3
SNX17-204ENST00000453453 Q6P435 159 aa13.2□□□□□ -0.3
SNX17-204ENST00000453453 SSX9Q7RTT3 188 aa13.2□□□□□ -0.3
SNX17-204ENST00000453453 H1FOOQ8IZA3 346 aaPredicted RBP13.2□□□□□ -0.3
SNX17-204ENST00000453453 TMEM252Q8N6L7 170 aa13.2□□□□□ -0.3
SNX17-204ENST00000453453 SLC35G3Q8N808 338 aa13.2□□□□□ -0.3
SNX17-204ENST00000453453 P2RX4Q99571 388 aa13.2□□□□□ -0.3
SNX17-204ENST00000453453 C2orf88Q9BSF0 95 aa13.2□□□□□ -0.3
SNX17-204ENST00000453453 PITPNC1Q9UKF7 332 aa13.2□□□□□ -0.3
SNX17-204ENST00000453453 DSCAMO60469 2012 aa13.2□□□□□ -0.3
SNX17-204ENST00000453453 SPTAN1Q13813 2472 aaKnown RBP13.19□□□□□ -0.3
SNX17-204ENST00000453453 C3orf85A0A1B0GTC6 90 aa13.19□□□□□ -0.3
SNX17-204ENST00000453453 C3orf80F5H4A9 247 aa13.19□□□□□ -0.3
SNX17-204ENST00000453453 TMEM178BH3BS89 294 aa13.19□□□□□ -0.3
SNX17-204ENST00000453453 CLDN34H7C241 214 aa13.19□□□□□ -0.3
SNX17-204ENST00000453453 GPR37O15354 613 aa13.19□□□□□ -0.3
SNX17-204ENST00000453453 OPN1MWP04001 364 aa13.19□□□□□ -0.3
SNX17-204ENST00000453453 OPN1MW2P0DN77 364 aa13.19□□□□□ -0.3
SNX17-204ENST00000453453 OPN1MW3P0DN78 364 aa13.19□□□□□ -0.3
SNX17-204ENST00000453453 DDTP30046 118 aa13.19□□□□□ -0.3
SNX17-204ENST00000453453 MDH2P40926 338 aaKnown RBP13.19□□□□□ -0.3
SNX17-204ENST00000453453 TAS2R30P59541 319 aa13.19□□□□□ -0.3
SNX17-204ENST00000453453 TAS2R60P59551 318 aa13.19□□□□□ -0.3
SNX17-204ENST00000453453 ERVFRD-1P60508 538 aa13.19□□□□□ -0.3
SNX17-204ENST00000453453 CLEC9AQ6UXN8 241 aa13.19□□□□□ -0.3
SNX17-204ENST00000453453 RDH5Q92781 318 aa13.19□□□□□ -0.3
SNX17-204ENST00000453453 FAM210BQ96KR6 192 aa13.19□□□□□ -0.3
SNX17-204ENST00000453453 ATP5SQ99766 215 aa13.19□□□□□ -0.3
SNX17-204ENST00000453453 ZNF581Q9P0T4 197 aa13.19□□□□□ -0.3
SNX17-204ENST00000453453 PPIAL4EA0A075B759 164 aa13.18□□□□□ -0.3
SNX17-204ENST00000453453 IGHV3OR15-7A0A075B7D8 119 aa13.18□□□□□ -0.3
SNX17-204ENST00000453453 TRAV38-1A0A0B4J264 116 aa13.18□□□□□ -0.3
SNX17-204ENST00000453453 OOEPA6NGQ2 149 aa13.18□□□□□ -0.3
SNX17-204ENST00000453453 PPIAL4DF5H284 164 aa13.18□□□□□ -0.3
SNX17-204ENST00000453453 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.18□□□□□ -0.3
SNX17-204ENST00000453453 HSPB6O14558 160 aa13.18□□□□□ -0.3
SNX17-204ENST00000453453 PPIAL4FP0DN26 164 aa13.18□□□□□ -0.3
SNX17-204ENST00000453453 PSG2P11465 335 aa13.18□□□□□ -0.3
SNX17-204ENST00000453453 SLC25A6P12236 298 aa13.18□□□□□ -0.3
SNX17-204ENST00000453453 UCP1P25874 307 aa13.18□□□□□ -0.3
SNX17-204ENST00000453453 PRDX2P32119 198 aa13.18□□□□□ -0.3
SNX17-204ENST00000453453 GABRA2P47869 451 aa13.18□□□□□ -0.3
SNX17-204ENST00000453453 CCL20P78556 96 aa13.18□□□□□ -0.3
SNX17-204ENST00000453453 MRPS11P82912 194 aaKnown RBP13.18□□□□□ -0.3
SNX17-204ENST00000453453 PHLDA2Q53GA4 152 aa13.18□□□□□ -0.3
SNX17-204ENST00000453453 BRICD5Q6PL45 260 aa13.18□□□□□ -0.3
SNX17-204ENST00000453453 SPNS3Q6ZMD2 512 aa13.18□□□□□ -0.3
SNX17-204ENST00000453453 CYB561D1Q8N8Q1 229 aa13.18□□□□□ -0.3
SNX17-204ENST00000453453 PPP1R35Q8TAP8 253 aa13.18□□□□□ -0.3
SNX17-204ENST00000453453 CYYR1Q96J86 154 aa13.18□□□□□ -0.3
SNX17-204ENST00000453453 NOL4LQ96MY1 436 aaPredicted RBP13.18□□□□□ -0.3
SNX17-204ENST00000453453 PPIAL4AQ9Y536 164 aa13.18□□□□□ -0.3
SNX17-204ENST00000453453 TRAV24A0A0B4J272 114 aa13.17□□□□□ -0.3
SNX17-204ENST00000453453 FAM24AA6NFZ4 105 aa13.17□□□□□ -0.3
SNX17-204ENST00000453453 ZNF727A8MUV8 499 aa13.17□□□□□ -0.3
SNX17-204ENST00000453453 SLC33A1O00400 549 aaPredicted RBP13.17□□□□□ -0.3
SNX17-204ENST00000453453 CYB5BO43169 146 aa13.17□□□□□ -0.3
SNX17-204ENST00000453453 WNT2P09544 360 aa13.17□□□□□ -0.3
SNX17-204ENST00000453453 FXYD4P59646 89 aa13.17□□□□□ -0.3
SNX17-204ENST00000453453 TEX36Q5VZQ5 186 aa13.17□□□□□ -0.3
SNX17-204ENST00000453453 RIMS4Q9H426 269 aaPredicted RBP13.17□□□□□ -0.3
SNX17-204ENST00000453453 A0A1B0GU03 582 aa13.17□□□□□ -0.3
SNX17-204ENST00000453453 SMCO3A2RU48 225 aa13.17□□□□□ -0.3
SNX17-204ENST00000453453 NKX6-3A6NJ46 265 aa13.17□□□□□ -0.3
SNX17-204ENST00000453453 PPYP01298 95 aa13.17□□□□□ -0.3
SNX17-204ENST00000453453 FGF7P21781 194 aa13.17□□□□□ -0.3
SNX17-204ENST00000453453 AADACP22760 399 aa13.17□□□□□ -0.3
SNX17-204ENST00000453453 CDKN1AP38936 164 aa13.17□□□□□ -0.3
SNX17-204ENST00000453453 CEBPDP49716 269 aaPredicted RBP13.17□□□□□ -0.3
SNX17-204ENST00000453453 RPL23AP62750 156 aaKnown RBP13.17□□□□□ -0.3
SNX17-204ENST00000453453 HOXA4Q00056 320 aaPredicted RBP13.17□□□□□ -0.3
SNX17-204ENST00000453453 ID3Q02535 119 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms