RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 VPS13CQ709C8 3753 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 PIGBOS1A0A0B4J2F0 54 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 A0A1B0GU03 582 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 ODF3BA8MYP8 253 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 RNASEK-C17orf49H0YIS7 233 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 H0YJW9 148 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 K7EPK0 472 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 TOR1AO14656 332 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 HPRT1P00492 218 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 MBPP02686 304 aaPredicted RBP4.86□□□□□ -1.63
SDC4P-201ENST00000453285 IL6RP08887 468 aaPredicted RBP4.86□□□□□ -1.63
SDC4P-201ENST00000453285 HOXB4P17483 251 aaPredicted RBP4.86□□□□□ -1.63
SDC4P-201ENST00000453285 CXCL2P19875 107 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 USF1P22415 310 aaPredicted RBP4.86□□□□□ -1.63
SDC4P-201ENST00000453285 COX7A1P24310 79 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 G6PCP35575 357 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 KIR2DS2P43631 304 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 DVL1P1P54792 670 aaPredicted RBP4.86□□□□□ -1.63
SDC4P-201ENST00000453285 ID3Q02535 119 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 FGL1Q08830 312 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 KLRD1Q13241 179 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 LRRC37A5PQ49AS3 106 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 CXorf66Q5JRM2 361 aaPredicted RBP4.86□□□□□ -1.63
SDC4P-201ENST00000453285 PRSS54Q6PEW0 395 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 VMO1Q7Z5L0 202 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 FAM219AQ8IW50 185 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 FAM71E2Q8N5Q1 922 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 DMBX1Q8NFW5 382 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 OR13D1Q8NGV5 346 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 OR10X1Q8NGY0 326 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 OR1S1Q8NH92 325 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 MRPL20Q9BYC9 149 aaKnown RBP4.86□□□□□ -1.63
SDC4P-201ENST00000453285 HEXA-AS1Q9H8Q6 139 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 PLSCR3Q9NRY6 295 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 OR5AC2Q9NZP5 309 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 COMMD9Q9P000 198 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 GSKIPQ9P0R6 139 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 PRELID3BQ9Y3B1 194 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 MMP24Q9Y5R2 645 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 ITPR3Q14573 2671 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 TEX15Q9BXT5 2789 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 ZANQ9Y493 2812 aa4.86□□□□□ -1.63
SDC4P-201ENST00000453285 CSMD2Q7Z408 3487 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 CCDC168Q8NDH2 2452 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 RNF222A6NCQ9 220 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 SRRM4A7MD48 611 aaKnown RBP4.85□□□□□ -1.63
SDC4P-201ENST00000453285 DEDDO75618 318 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 TOX4O94842 621 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 KRASP01116 189 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 ARG1P05089 322 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 OR9G9P0C7N8 305 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 EPHA1P21709 976 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 IL3RAP26951 378 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 REG1BP48304 166 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 IFITM2Q01629 132 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 TAGLNQ01995 201 aaKnown RBP4.85□□□□□ -1.63
SDC4P-201ENST00000453285 LOXL1Q08397 574 aaPredicted RBP4.85□□□□□ -1.63
SDC4P-201ENST00000453285 SMCO1Q147U7 214 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 POU2AF1Q16633 256 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 TMEM177Q53S58 311 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 TPTE2P1Q5T6R2 138 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 PRSS57Q6UWY2 283 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 LHFPL4Q7Z7J7 247 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 ZNF546Q86UE3 836 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 TGIF2LXQ8IUE1 241 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 OR4S2Q8NH73 311 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 THAP6Q8TBB0 222 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 R3HDM4Q96D70 268 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 RRNAD1Q96FB5 475 aaKnown RBP4.85□□□□□ -1.63
SDC4P-201ENST00000453285 AJUBAQ96IF1 538 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 SPIN2AQ99865 258 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 SPIN2BQ9BPZ2 258 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 PCGF1Q9BSM1 259 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 LPAR2Q9HBW0 351 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 SLC35D1Q9NTN3 355 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 COA4Q9NYJ1 87 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 MBD2Q9UBB5 411 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 CACNG5Q9UF02 275 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 TNFSF18Q9UNG2 199 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 RCL1Q9Y2P8 373 aaKnown RBP4.85□□□□□ -1.63
SDC4P-201ENST00000453285 POMT1Q9Y6A1 747 aa4.85□□□□□ -1.63
SDC4P-201ENST00000453285 FXYD6-FXYD2A0A087WZ82 144 aa4.84□□□□□ -1.63
SDC4P-201ENST00000453285 TRAV3A0A0B4J244 114 aa4.84□□□□□ -1.63
SDC4P-201ENST00000453285 IGHV1-3A0A0C4DH29 117 aa4.84□□□□□ -1.63
SDC4P-201ENST00000453285 A0A1W2PPI3 338 aa4.84□□□□□ -1.63
SDC4P-201ENST00000453285 MSGN1A6NI15 193 aa4.84□□□□□ -1.63
SDC4P-201ENST00000453285 MARCH11A6NNE9 402 aa4.84□□□□□ -1.63
SDC4P-201ENST00000453285 FAM90A9PA6NNJ1 464 aa4.84□□□□□ -1.63
SDC4P-201ENST00000453285 LEUTXA8MZ59 168 aa4.84□□□□□ -1.63
SDC4P-201ENST00000453285 ARPC5O15511 151 aa4.84□□□□□ -1.63
SDC4P-201ENST00000453285 ST8SIA3O43173 380 aa4.84□□□□□ -1.63
SDC4P-201ENST00000453285 KCNAB3O43448 404 aa4.84□□□□□ -1.63
SDC4P-201ENST00000453285 ATG12O94817 140 aa4.84□□□□□ -1.63
SDC4P-201ENST00000453285 TMEM50AO95807 157 aa4.84□□□□□ -1.63
SDC4P-201ENST00000453285 CRYZL1O95825 349 aa4.84□□□□□ -1.63
SDC4P-201ENST00000453285 SCGB1D2O95969 90 aa4.84□□□□□ -1.63
SDC4P-201ENST00000453285 IGLV2-23P01705 113 aa4.84□□□□□ -1.63
SDC4P-201ENST00000453285 GAPDHP04406 335 aaKnown RBP4.84□□□□□ -1.63
SDC4P-201ENST00000453285 IGKV1-16P04430 117 aa4.84□□□□□ -1.63
SDC4P-201ENST00000453285 MSMBP08118 114 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms