RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 IGHV7-81A0A0B4J1V7 117 aa15.69■□□□□ 0.1
COL9A3-202ENST00000452372 IGLV2-23P01705 113 aa15.69■□□□□ 0.1
COL9A3-202ENST00000452372 HERV-K104P61576 105 aa15.69■□□□□ 0.1
COL9A3-202ENST00000452372 SLC35B1P78383 322 aa15.69■□□□□ 0.1
COL9A3-202ENST00000452372 MRPS10P82664 201 aaKnown RBP15.69■□□□□ 0.1
COL9A3-202ENST00000452372 PLGLAQ15195 96 aa15.69■□□□□ 0.1
COL9A3-202ENST00000452372 RNASE12Q5GAN4 147 aaKnown RBP15.69■□□□□ 0.1
COL9A3-202ENST00000452372 PYHIN1Q6K0P9 492 aa15.69■□□□□ 0.1
COL9A3-202ENST00000452372 ZNF66Q6ZN08 573 aa15.69■□□□□ 0.1
COL9A3-202ENST00000452372 KCTD9Q7L273 389 aa15.69■□□□□ 0.1
COL9A3-202ENST00000452372 ZNF329Q86UD4 541 aa15.69■□□□□ 0.1
COL9A3-202ENST00000452372 MFSD4AQ8N468 514 aa15.69■□□□□ 0.1
COL9A3-202ENST00000452372 FAM110DQ8TAY7 271 aaPredicted RBP15.69■□□□□ 0.1
COL9A3-202ENST00000452372 ZNF2Q9BSG1 426 aaPredicted RBP15.69■□□□□ 0.1
COL9A3-202ENST00000452372 OR51J1Q9H342 316 aa15.69■□□□□ 0.1
COL9A3-202ENST00000452372 METTL1Q9UBP6 276 aaKnown RBP15.69■□□□□ 0.1
COL9A3-202ENST00000452372 PRELID3BQ9Y3B1 194 aa15.69■□□□□ 0.1
COL9A3-202ENST00000452372 SRRM4A7MD48 611 aaKnown RBP15.68■□□□□ 0.1
COL9A3-202ENST00000452372 GABARAPH6UMI1 98 aa15.68■□□□□ 0.1
COL9A3-202ENST00000452372 FCN1O00602 326 aa15.68■□□□□ 0.1
COL9A3-202ENST00000452372 SHOXO15266 292 aa15.68■□□□□ 0.1
COL9A3-202ENST00000452372 TNFSF8P32971 234 aa15.68■□□□□ 0.1
COL9A3-202ENST00000452372 NDUFA11Q86Y39 141 aa15.68■□□□□ 0.1
COL9A3-202ENST00000452372 MOB3AQ96BX8 217 aa15.68■□□□□ 0.1
COL9A3-202ENST00000452372 HARBI1Q96MB7 349 aa15.68■□□□□ 0.1
COL9A3-202ENST00000452372 DCUN1D5Q9BTE7 237 aa15.68■□□□□ 0.1
COL9A3-202ENST00000452372 TAS2R8Q9NYW2 309 aa15.68■□□□□ 0.1
COL9A3-202ENST00000452372 TCRBV4S1A1TA0A5B7 111 aa15.67■□□□□ 0.1
COL9A3-202ENST00000452372 ADARB2-AS1A8MUL3 147 aa15.67■□□□□ 0.1
COL9A3-202ENST00000452372 CTDSPLO15194 276 aa15.67■□□□□ 0.1
COL9A3-202ENST00000452372 SLC25A17O43808 307 aa15.67■□□□□ 0.1
COL9A3-202ENST00000452372 FCGR3BO75015 233 aa15.67■□□□□ 0.1
COL9A3-202ENST00000452372 CRYZL1O95825 349 aa15.67■□□□□ 0.1
COL9A3-202ENST00000452372 OPN1MWP04001 364 aa15.67■□□□□ 0.1
COL9A3-202ENST00000452372 CSF1P09603 554 aa15.67■□□□□ 0.1
COL9A3-202ENST00000452372 OPN1MW2P0DN77 364 aa15.67■□□□□ 0.1
COL9A3-202ENST00000452372 OPN1MW3P0DN78 364 aa15.67■□□□□ 0.1
COL9A3-202ENST00000452372 GNRHRP30968 328 aa15.67■□□□□ 0.1
COL9A3-202ENST00000452372 TSPAN5P62079 268 aa15.67■□□□□ 0.1
COL9A3-202ENST00000452372 CX3CL1P78423 397 aa15.67■□□□□ 0.1
COL9A3-202ENST00000452372 SSBP1Q04837 148 aaKnown RBP15.67■□□□□ 0.1
COL9A3-202ENST00000452372 IL18Q14116 193 aa15.67■□□□□ 0.1
COL9A3-202ENST00000452372 ACTBL2Q562R1 376 aa15.67■□□□□ 0.1
COL9A3-202ENST00000452372 VAX1Q5SQQ9 334 aa15.67■□□□□ 0.1
COL9A3-202ENST00000452372 TMEM17Q86X19 198 aa15.67■□□□□ 0.1
COL9A3-202ENST00000452372 COMMD1Q8N668 190 aa15.67■□□□□ 0.1
COL9A3-202ENST00000452372 OSR1Q8TAX0 266 aaPredicted RBP15.67■□□□□ 0.1
COL9A3-202ENST00000452372 BORCS5Q969J3 196 aa15.67■□□□□ 0.1
COL9A3-202ENST00000452372 NDUFA13Q9P0J0 144 aa15.67■□□□□ 0.1
COL9A3-202ENST00000452372 A3GALT2U3KPV4 340 aa15.67■□□□□ 0.1
COL9A3-202ENST00000452372 CRYGBP07316 175 aa15.66■□□□□ 0.1
COL9A3-202ENST00000452372 VDAC1P21796 283 aa15.66■□□□□ 0.1
COL9A3-202ENST00000452372 DGCR2P98153 550 aa15.66■□□□□ 0.1
COL9A3-202ENST00000452372 NSUN5P1Q3KNT7 163 aa15.66■□□□□ 0.1
COL9A3-202ENST00000452372 TEX38Q6PEX7 206 aa15.66■□□□□ 0.1
COL9A3-202ENST00000452372 ZNF562Q6V9R5 426 aa15.66■□□□□ 0.1
COL9A3-202ENST00000452372 ZNF818PQ6ZRF7 136 aa15.66■□□□□ 0.1
COL9A3-202ENST00000452372 C1QL4Q86Z23 238 aa15.66■□□□□ 0.1
COL9A3-202ENST00000452372 TCTEX1D2Q8WW35 142 aa15.66■□□□□ 0.1
COL9A3-202ENST00000452372 GPHA2Q96T91 129 aa15.66■□□□□ 0.1
COL9A3-202ENST00000452372 SOSTQ9BQB4 213 aa15.66■□□□□ 0.1
COL9A3-202ENST00000452372 PARP11Q9NR21 331 aa15.66■□□□□ 0.1
COL9A3-202ENST00000452372 TSSC4Q9Y5U2 329 aaPredicted RBP15.66■□□□□ 0.1
COL9A3-202ENST00000452372 DNAH3Q8TD57 4116 aa15.66■□□□□ 0.1
COL9A3-202ENST00000452372 ATP6V0E1O15342 81 aa15.65■□□□□ 0.1
COL9A3-202ENST00000452372 TNFSF12O43508 249 aa15.65■□□□□ 0.1
COL9A3-202ENST00000452372 TBPP20226 339 aa15.65■□□□□ 0.1
COL9A3-202ENST00000452372 BRWD1-AS2P59051 145 aa15.65■□□□□ 0.1
COL9A3-202ENST00000452372 CFHR3Q02985 330 aa15.65■□□□□ 0.1
COL9A3-202ENST00000452372 PPP1R27Q86WC6 154 aa15.65■□□□□ 0.1
COL9A3-202ENST00000452372 SMIM4Q8WVI0 70 aa15.65■□□□□ 0.1
COL9A3-202ENST00000452372 DGCR14Q96DF8 476 aaKnown RBP15.65■□□□□ 0.1
COL9A3-202ENST00000452372 CLCC1Q96S66 551 aa15.65■□□□□ 0.1
COL9A3-202ENST00000452372 TNCP24821 2201 aa15.65■□□□□ 0.1
COL9A3-202ENST00000452372 FABP12A6NFH5 140 aa15.64■□□□□ 0.09
COL9A3-202ENST00000452372 M0QYG6 137 aa15.64■□□□□ 0.09
COL9A3-202ENST00000452372 CA2P00918 260 aa15.64■□□□□ 0.09
COL9A3-202ENST00000452372 CD3DP04234 171 aa15.64■□□□□ 0.09
COL9A3-202ENST00000452372 UBE2KP61086 200 aa15.64■□□□□ 0.09
COL9A3-202ENST00000452372 NDPQ00604 133 aa15.64■□□□□ 0.09
COL9A3-202ENST00000452372 OR2B11Q5JQS5 317 aa15.64■□□□□ 0.09
COL9A3-202ENST00000452372 TEX45Q8NA69 505 aa15.64■□□□□ 0.09
COL9A3-202ENST00000452372 TMEM229BQ8NBD8 167 aa15.64■□□□□ 0.09
COL9A3-202ENST00000452372 OR4S2Q8NH73 311 aa15.64■□□□□ 0.09
COL9A3-202ENST00000452372 TINAGL1Q9GZM7 467 aaPredicted RBP15.64■□□□□ 0.09
COL9A3-202ENST00000452372 FXYD6Q9H0Q3 95 aa15.64■□□□□ 0.09
COL9A3-202ENST00000452372 TPSG1Q9NRR2 321 aa15.64■□□□□ 0.09
COL9A3-202ENST00000452372 WSB1Q9Y6I7 421 aa15.64■□□□□ 0.09
COL9A3-202ENST00000452372 DPPA5A6NC42 116 aa15.63■□□□□ 0.09
COL9A3-202ENST00000452372 G3V318 75 aa15.63■□□□□ 0.09
COL9A3-202ENST00000452372 IGHG4P01861 327 aa15.63■□□□□ 0.09
COL9A3-202ENST00000452372 IFNA6P05013 189 aa15.63■□□□□ 0.09
COL9A3-202ENST00000452372 PPIFP30405 207 aaKnown RBP15.63■□□□□ 0.09
COL9A3-202ENST00000452372 KIR2DS2P43631 304 aa15.63■□□□□ 0.09
COL9A3-202ENST00000452372 CRIP2P52943 208 aaPredicted RBP15.63■□□□□ 0.09
COL9A3-202ENST00000452372 TAS2R19P59542 299 aa15.63■□□□□ 0.09
COL9A3-202ENST00000452372 CATR1Q13166 79 aa15.63■□□□□ 0.09
COL9A3-202ENST00000452372 VMA21Q3ZAQ7 101 aa15.63■□□□□ 0.09
COL9A3-202ENST00000452372 RNASE10Q5GAN6 216 aaKnown RBP15.63■□□□□ 0.09
COL9A3-202ENST00000452372 LPCAT3Q6P1A2 487 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms