RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 TMEM267Q0VDI3 215 aaPredicted RBP9.92□□□□□ -0.82
PRPF40A-203ENST00000448428 CBX3Q13185 183 aa9.92□□□□□ -0.82
PRPF40A-203ENST00000448428 FXYD3Q14802 87 aa9.92□□□□□ -0.82
PRPF40A-203ENST00000448428 AKIRIN2Q53H80 203 aa9.92□□□□□ -0.82
PRPF40A-203ENST00000448428 ANKRD13BQ86YJ7 626 aa9.92□□□□□ -0.82
PRPF40A-203ENST00000448428 LFNGQ8NES3 379 aa9.92□□□□□ -0.82
PRPF40A-203ENST00000448428 CASTOR1Q8WTX7 329 aa9.92□□□□□ -0.82
PRPF40A-203ENST00000448428 C4orf3Q8WVX3 66 aa9.92□□□□□ -0.82
PRPF40A-203ENST00000448428 SNAPC3Q92966 411 aa9.92□□□□□ -0.82
PRPF40A-203ENST00000448428 KCTD12Q96CX2 325 aaKnown RBP9.92□□□□□ -0.82
PRPF40A-203ENST00000448428 UBE2E2Q96LR5 201 aa9.92□□□□□ -0.82
PRPF40A-203ENST00000448428 HARBI1Q96MB7 349 aa9.92□□□□□ -0.82
PRPF40A-203ENST00000448428 GNB4Q9HAV0 340 aa9.92□□□□□ -0.82
PRPF40A-203ENST00000448428 NECAP2Q9NVZ3 263 aa9.92□□□□□ -0.82
PRPF40A-203ENST00000448428 FOXA2Q9Y261 457 aaPredicted RBP9.92□□□□□ -0.82
PRPF40A-203ENST00000448428 RBMX2Q9Y388 322 aaKnown RBP9.92□□□□□ -0.82
PRPF40A-203ENST00000448428 SLC22A5O76082 557 aa9.91□□□□□ -0.82
PRPF40A-203ENST00000448428 DUS4LO95620 317 aaKnown RBP9.91□□□□□ -0.82
PRPF40A-203ENST00000448428 CRYZL1O95825 349 aa9.91□□□□□ -0.82
PRPF40A-203ENST00000448428 EIF4EP06730 217 aaKnown RBP9.91□□□□□ -0.82
PRPF40A-203ENST00000448428 AADACP22760 399 aa9.91□□□□□ -0.82
PRPF40A-203ENST00000448428 FCGR2CP31995 323 aa9.91□□□□□ -0.82
PRPF40A-203ENST00000448428 CBX5P45973 191 aa9.91□□□□□ -0.82
PRPF40A-203ENST00000448428 TAS2R20P59543 309 aa9.91□□□□□ -0.82
PRPF40A-203ENST00000448428 RPL30P62888 115 aaKnown RBP9.91□□□□□ -0.82
PRPF40A-203ENST00000448428 CTF1Q16619 201 aa9.91□□□□□ -0.82
PRPF40A-203ENST00000448428 MRGPRG-AS1Q2M3A8 158 aa9.91□□□□□ -0.82
PRPF40A-203ENST00000448428 ACTBL2Q562R1 376 aa9.91□□□□□ -0.82
PRPF40A-203ENST00000448428 UNQ5815/PRO19632Q6UWF5 114 aa9.91□□□□□ -0.82
PRPF40A-203ENST00000448428 REC114Q7Z4M0 266 aa9.91□□□□□ -0.82
PRPF40A-203ENST00000448428 TCTEX1D1Q8N7M0 179 aa9.91□□□□□ -0.82
PRPF40A-203ENST00000448428 ARPC1AQ92747 370 aa9.91□□□□□ -0.82
PRPF40A-203ENST00000448428 COMMD3Q9UBI1 195 aa9.91□□□□□ -0.82
PRPF40A-203ENST00000448428 I3L521 148 aa9.9□□□□□ -0.82
PRPF40A-203ENST00000448428 CNIH1O95406 144 aa9.9□□□□□ -0.82
PRPF40A-203ENST00000448428 RAB25P57735 213 aa9.9□□□□□ -0.82
PRPF40A-203ENST00000448428 GNB1P62873 340 aa9.9□□□□□ -0.82
PRPF40A-203ENST00000448428 EIF4EBP1Q13541 118 aaPredicted RBP9.9□□□□□ -0.82
PRPF40A-203ENST00000448428 TMEM69Q5SWH9 247 aa9.9□□□□□ -0.82
PRPF40A-203ENST00000448428 GPR107Q5VW38 600 aa9.9□□□□□ -0.82
PRPF40A-203ENST00000448428 KCTD9Q7L273 389 aa9.9□□□□□ -0.82
PRPF40A-203ENST00000448428 TEX45Q8NA69 505 aa9.9□□□□□ -0.82
PRPF40A-203ENST00000448428 OR11H1Q8NG94 326 aa9.9□□□□□ -0.82
PRPF40A-203ENST00000448428 OR5AP2Q8NGF4 316 aa9.9□□□□□ -0.82
PRPF40A-203ENST00000448428 GRPEL2Q8TAA5 225 aa9.9□□□□□ -0.82
PRPF40A-203ENST00000448428 OR5B12Q96R08 314 aa9.9□□□□□ -0.82
PRPF40A-203ENST00000448428 GPHA2Q96T91 129 aa9.9□□□□□ -0.82
PRPF40A-203ENST00000448428 MRPS26Q9BYN8 205 aaKnown RBP9.9□□□□□ -0.82
PRPF40A-203ENST00000448428 CCL28Q9NRJ3 127 aa9.9□□□□□ -0.82
PRPF40A-203ENST00000448428 AURKAIP1Q9NWT8 199 aaPredicted RBP9.9□□□□□ -0.82
PRPF40A-203ENST00000448428 VSIG4Q9Y279 399 aa9.9□□□□□ -0.82
PRPF40A-203ENST00000448428 TNCP24821 2201 aa9.89□□□□□ -0.83
PRPF40A-203ENST00000448428 FCGR3BO75015 233 aa9.89□□□□□ -0.83
PRPF40A-203ENST00000448428 GABARAPO95166 117 aa9.89□□□□□ -0.83
PRPF40A-203ENST00000448428 PPYP01298 95 aa9.89□□□□□ -0.83
PRPF40A-203ENST00000448428 APOA1P02647 267 aa9.89□□□□□ -0.83
PRPF40A-203ENST00000448428 HOXD3P31249 432 aaPredicted RBP9.89□□□□□ -0.83
PRPF40A-203ENST00000448428 PRSS3P35030 304 aa9.89□□□□□ -0.83
PRPF40A-203ENST00000448428 ALDH3B2P48448 385 aa9.89□□□□□ -0.83
PRPF40A-203ENST00000448428 RORCP51449 518 aa9.89□□□□□ -0.83
PRPF40A-203ENST00000448428 BRWD1-AS2P59051 145 aa9.89□□□□□ -0.83
PRPF40A-203ENST00000448428 KRTAP10-11P60412 298 aa9.89□□□□□ -0.83
PRPF40A-203ENST00000448428 UBE2KP61086 200 aa9.89□□□□□ -0.83
PRPF40A-203ENST00000448428 RUNX1Q01196 453 aa9.89□□□□□ -0.83
PRPF40A-203ENST00000448428 VMA21Q3ZAQ7 101 aa9.89□□□□□ -0.83
PRPF40A-203ENST00000448428 OR2B11Q5JQS5 317 aa9.89□□□□□ -0.83
PRPF40A-203ENST00000448428 IDO2Q6ZQW0 420 aa9.89□□□□□ -0.83
PRPF40A-203ENST00000448428 OVCH2Q7RTZ1 564 aa9.89□□□□□ -0.83
PRPF40A-203ENST00000448428 MFSD4AQ8N468 514 aa9.89□□□□□ -0.83
PRPF40A-203ENST00000448428 OR5M8Q8NGP6 311 aa9.89□□□□□ -0.83
PRPF40A-203ENST00000448428 OSR1Q8TAX0 266 aaPredicted RBP9.89□□□□□ -0.83
PRPF40A-203ENST00000448428 SECTM1Q8WVN6 248 aa9.89□□□□□ -0.83
PRPF40A-203ENST00000448428 GIMAP1Q8WWP7 306 aa9.89□□□□□ -0.83
PRPF40A-203ENST00000448428 ACOT12Q8WYK0 555 aa9.89□□□□□ -0.83
PRPF40A-203ENST00000448428 CMTM3Q96MX0 182 aa9.89□□□□□ -0.83
PRPF40A-203ENST00000448428 MS4A10Q96PG2 267 aa9.89□□□□□ -0.83
PRPF40A-203ENST00000448428 HSD17B10Q99714 261 aaKnown RBP9.89□□□□□ -0.83
PRPF40A-203ENST00000448428 DCUN1D5Q9BTE7 237 aa9.89□□□□□ -0.83
PRPF40A-203ENST00000448428 MCRIP2Q9BUT9 160 aaKnown RBP9.89□□□□□ -0.83
PRPF40A-203ENST00000448428 IFT46Q9NQC8 304 aa9.89□□□□□ -0.83
PRPF40A-203ENST00000448428 TAS2R8Q9NYW2 309 aa9.89□□□□□ -0.83
PRPF40A-203ENST00000448428 PRELID3BQ9Y3B1 194 aa9.89□□□□□ -0.83
PRPF40A-203ENST00000448428 SMIM31A0A1B0GVY4 71 aa9.88□□□□□ -0.83
PRPF40A-203ENST00000448428 HPGDSO60760 199 aa9.88□□□□□ -0.83
PRPF40A-203ENST00000448428 NAT1P18440 290 aa9.88□□□□□ -0.83
PRPF40A-203ENST00000448428 ELK1P19419 428 aa9.88□□□□□ -0.83
PRPF40A-203ENST00000448428 RFX2P48378 723 aa9.88□□□□□ -0.83
PRPF40A-203ENST00000448428 EGFEM1PQ0D2K5 195 aa9.88□□□□□ -0.83
PRPF40A-203ENST00000448428 FHL3Q13643 280 aa9.88□□□□□ -0.83
PRPF40A-203ENST00000448428 CDK10Q15131 360 aa9.88□□□□□ -0.83
PRPF40A-203ENST00000448428 PRSS8Q16651 343 aa9.88□□□□□ -0.83
PRPF40A-203ENST00000448428 ASPHD1Q5U4P2 390 aa9.88□□□□□ -0.83
PRPF40A-203ENST00000448428 PYHIN1Q6K0P9 492 aa9.88□□□□□ -0.83
PRPF40A-203ENST00000448428 ZNF66Q6ZN08 573 aa9.88□□□□□ -0.83
PRPF40A-203ENST00000448428 LYSMD2Q8IV50 215 aa9.88□□□□□ -0.83
PRPF40A-203ENST00000448428 OR5T1Q8NG75 326 aa9.88□□□□□ -0.83
PRPF40A-203ENST00000448428 OR1N2Q8NGR9 330 aa9.88□□□□□ -0.83
PRPF40A-203ENST00000448428 TCTEX1D2Q8WW35 142 aa9.88□□□□□ -0.83
PRPF40A-203ENST00000448428 SLC5A7Q9GZV3 580 aa9.88□□□□□ -0.83
PRPF40A-203ENST00000448428 ALX4Q9H161 411 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms