RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 FAM90A8PA6NJQ4 464 aa7.93□□□□□ -1.14
SYNPO2-204ENST00000448416 FAM90A7PA6NKC0 464 aa7.93□□□□□ -1.14
SYNPO2-204ENST00000448416 FAM90A22PA8MWA6 464 aa7.93□□□□□ -1.14
SYNPO2-204ENST00000448416 FAM90A12PA8MX19 464 aa7.93□□□□□ -1.14
SYNPO2-204ENST00000448416 FAM90A5PA8MXJ8 464 aa7.93□□□□□ -1.14
SYNPO2-204ENST00000448416 FAM90A23PA8MXZ1 464 aa7.93□□□□□ -1.14
SYNPO2-204ENST00000448416 BMPR1BO00238 502 aa7.93□□□□□ -1.14
SYNPO2-204ENST00000448416 LINC00271P0C7V0 271 aa7.93□□□□□ -1.14
SYNPO2-204ENST00000448416 FAM90A15PP0C7V4 464 aa7.93□□□□□ -1.14
SYNPO2-204ENST00000448416 FAM90A13PP0C7W8 464 aa7.93□□□□□ -1.14
SYNPO2-204ENST00000448416 FAM90A14PP0C7W9 464 aa7.93□□□□□ -1.14
SYNPO2-204ENST00000448416 FAM90A24PP0C7X0 464 aa7.93□□□□□ -1.14
SYNPO2-204ENST00000448416 ARL14EPLP0DKL9 152 aa7.93□□□□□ -1.14
SYNPO2-204ENST00000448416 COL9A1P20849 921 aa7.93□□□□□ -1.14
SYNPO2-204ENST00000448416 CRYGSP22914 178 aa7.93□□□□□ -1.14
SYNPO2-204ENST00000448416 BMI1P35226 326 aa7.93□□□□□ -1.14
SYNPO2-204ENST00000448416 TRIP6Q15654 476 aaKnown RBP7.93□□□□□ -1.14
SYNPO2-204ENST00000448416 MUC21Q5SSG8 566 aa7.93□□□□□ -1.14
SYNPO2-204ENST00000448416 DEFB125Q8N687 156 aa7.93□□□□□ -1.14
SYNPO2-204ENST00000448416 NEUROG1Q92886 237 aa7.93□□□□□ -1.14
SYNPO2-204ENST00000448416 HS3ST6Q96QI5 342 aa7.93□□□□□ -1.14
SYNPO2-204ENST00000448416 IL36RNQ9UBH0 155 aa7.93□□□□□ -1.14
SYNPO2-204ENST00000448416 TP73-AS1Q9UF72 201 aa7.93□□□□□ -1.14
SYNPO2-204ENST00000448416 H0YJW9 148 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 TNFSF11O14788 317 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 FBLP22087 321 aaKnown RBP7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 TCL1AP56279 114 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 TGFBR3Q03167 851 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 MRPL49Q13405 166 aaKnown RBP7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 COX19Q49B96 90 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 FOXL2NBQ6ZUU3 175 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 OR2M7Q8NG81 312 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 OR1F12Q8NHA8 337 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 METTL7AQ9H8H3 244 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 M0R2Z0 102 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 LINC00869P0C866 280 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 KIR2DL1P43626 348 aaPredicted RBP7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 CAPZBP47756 277 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 FOXL2P58012 376 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 SELENOVP59797 346 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 ARF6P62330 175 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 CX3CL1P78423 397 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 BVES-AS1Q5T3Y7 98 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 MRPL54Q6P161 138 aaKnown RBP7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 SARAFQ96BY9 339 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 ZNF837Q96EG3 531 aaPredicted RBP7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 C19orf25Q9UFG5 118 aaPredicted RBP7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 V9GYV3 84 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 NPIPA3F8WFD2 350 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 OR7C2O60412 319 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 PATE4P0C8F1 98 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 UBE2G1P62253 170 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 HLA-BQ31612 363 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 C20orf204Q6ZNR8 217 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 SLC22A18ASQ8N1D0 253 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 RAB1CQ92928 201 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 EAF1Q96JC9 268 aaPredicted RBP7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 OR1A1Q9P1Q5 309 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 IGHV3-15A0A0B4J1V0 119 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 PMS2P5A8MQ11 134 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 ZG16O60844 167 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 HLA-DQA1P01909 254 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 CA3P07451 260 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 SLC25A53Q5H9E4 307 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 EBLN2Q6P2I7 272 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 C12orf54Q6X4T0 127 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 SZT2Q5T011 3432 aa7.92□□□□□ -1.14
SYNPO2-204ENST00000448416 FAM181BA6NEQ2 426 aa7.91□□□□□ -1.14
SYNPO2-204ENST00000448416 RBMXL2O75526 392 aaKnown RBP7.91□□□□□ -1.14
SYNPO2-204ENST00000448416 CA7P43166 264 aa7.91□□□□□ -1.14
SYNPO2-204ENST00000448416 FGF12P61328 243 aa7.91□□□□□ -1.14
SYNPO2-204ENST00000448416 TNXAQ16473 311 aa7.91□□□□□ -1.14
SYNPO2-204ENST00000448416 TMEM249Q2WGJ8 235 aa7.91□□□□□ -1.14
SYNPO2-204ENST00000448416 FAM27BQ5VT28 67 aa7.91□□□□□ -1.14
SYNPO2-204ENST00000448416 SCCPDHQ8NBX0 429 aa7.91□□□□□ -1.14
SYNPO2-204ENST00000448416 OR2Y1Q8NGV0 311 aa7.91□□□□□ -1.14
SYNPO2-204ENST00000448416 TMEM54Q969K7 222 aa7.91□□□□□ -1.14
SYNPO2-204ENST00000448416 OR2D2Q9H210 308 aa7.91□□□□□ -1.14
SYNPO2-204ENST00000448416 ARL2-SNX15V9GYD0 113 aa7.91□□□□□ -1.14
SYNPO2-204ENST00000448416 hCG_38984A0A1B0GV85 526 aa7.91□□□□□ -1.14
SYNPO2-204ENST00000448416 RAB29O14966 203 aa7.91□□□□□ -1.14
SYNPO2-204ENST00000448416 SYNGR3O43761 229 aa7.91□□□□□ -1.14
SYNPO2-204ENST00000448416 APCSP02743 223 aa7.91□□□□□ -1.14
SYNPO2-204ENST00000448416 CD46P15529 392 aa7.91□□□□□ -1.14
SYNPO2-204ENST00000448416 HOXC12P31275 282 aa7.91□□□□□ -1.14
SYNPO2-204ENST00000448416 ARR3P36575 388 aa7.91□□□□□ -1.14
SYNPO2-204ENST00000448416 PAX2Q02962 417 aa7.91□□□□□ -1.14
SYNPO2-204ENST00000448416 S100A7AQ86SG5 101 aa7.91□□□□□ -1.14
SYNPO2-204ENST00000448416 RLN3Q8WXF3 142 aa7.91□□□□□ -1.14
SYNPO2-204ENST00000448416 NINJ1Q92982 152 aa7.91□□□□□ -1.14
SYNPO2-204ENST00000448416 RANBP2P49792 3224 aaKnown RBP7.91□□□□□ -1.14
SYNPO2-204ENST00000448416 NDUFS8O00217 210 aa7.91□□□□□ -1.14
SYNPO2-204ENST00000448416 RAMP3O60896 148 aa7.91□□□□□ -1.14
SYNPO2-204ENST00000448416 AMY1AP04745 511 aa7.91□□□□□ -1.14
SYNPO2-204ENST00000448416 FER1L6-AS1Q8NA97 138 aa7.91□□□□□ -1.14
SYNPO2-204ENST00000448416 CLUHP3Q96NS8 147 aa7.91□□□□□ -1.14
SYNPO2-204ENST00000448416 TRAV8-6A0A0B4J262 113 aa7.9□□□□□ -1.14
SYNPO2-204ENST00000448416 CXorf1O96002 111 aa7.9□□□□□ -1.14
SYNPO2-204ENST00000448416 FXYD3Q14802 87 aa7.9□□□□□ -1.14
SYNPO2-204ENST00000448416 SPINK9Q5DT21 86 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms