RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 COA4Q9NYJ1 87 aa21.61■■□□□ 1.05
CBX4-202ENST00000448310 RBM7Q9Y580 266 aaKnown RBP21.61■■□□□ 1.05
CBX4-202ENST00000448310 A0A0B4J203 849 aa21.6■■□□□ 1.05
CBX4-202ENST00000448310 SYNJ2BPP57105 145 aa21.6■■□□□ 1.05
CBX4-202ENST00000448310 CBX3Q13185 183 aa21.6■■□□□ 1.05
CBX4-202ENST00000448310 SSX1Q16384 188 aa21.6■■□□□ 1.05
CBX4-202ENST00000448310 OR9G4Q8NGQ1 327 aa21.6■■□□□ 1.05
CBX4-202ENST00000448310 RAB27BO00194 218 aa21.59■■□□□ 1.05
CBX4-202ENST00000448310 LYL1P12980 280 aa21.59■■□□□ 1.05
CBX4-202ENST00000448310 RANBP1P43487 201 aa21.59■■□□□ 1.05
CBX4-202ENST00000448310 DYRK1AQ13627 763 aa21.59■■□□□ 1.05
CBX4-202ENST00000448310 RTL8BQ17RB0 113 aa21.59■■□□□ 1.05
CBX4-202ENST00000448310 IL34Q6ZMJ4 242 aa21.59■■□□□ 1.05
CBX4-202ENST00000448310 SGPP2Q8IWX5 399 aa21.59■■□□□ 1.05
CBX4-202ENST00000448310 TMEM68Q96MH6 324 aa21.59■■□□□ 1.05
CBX4-202ENST00000448310 PHB2Q99623 299 aa21.59■■□□□ 1.05
CBX4-202ENST00000448310 GINS4Q9BRT9 223 aa21.59■■□□□ 1.05
CBX4-202ENST00000448310 C19orf73Q9NVV2 129 aa21.59■■□□□ 1.05
CBX4-202ENST00000448310 GAR1Q9NY12 217 aaKnown RBP21.59■■□□□ 1.05
CBX4-202ENST00000448310 PDCD5O14737 125 aa21.58■■□□□ 1.05
CBX4-202ENST00000448310 RBMXL2O75526 392 aaKnown RBP21.58■■□□□ 1.05
CBX4-202ENST00000448310 HIST1H1DP16402 221 aaKnown RBP21.58■■□□□ 1.05
CBX4-202ENST00000448310 GADD45AP24522 165 aa21.58■■□□□ 1.05
CBX4-202ENST00000448310 IDO2Q6ZQW0 420 aa21.58■■□□□ 1.05
CBX4-202ENST00000448310 CITED4Q96RK1 184 aa21.58■■□□□ 1.05
CBX4-202ENST00000448310 PEF1Q9UBV8 284 aaKnown RBP21.58■■□□□ 1.05
CBX4-202ENST00000448310 IGKV1D-8A0A087WSZ0 117 aa21.57■■□□□ 1.04
CBX4-202ENST00000448310 MSGN1A6NI15 193 aa21.57■■□□□ 1.04
CBX4-202ENST00000448310 IFITM5A6NNB3 132 aa21.57■■□□□ 1.04
CBX4-202ENST00000448310 TNXAQ16473 311 aa21.57■■□□□ 1.04
CBX4-202ENST00000448310 ZNF343Q6P1L6 599 aa21.57■■□□□ 1.04
CBX4-202ENST00000448310 PALMDQ9NP74 551 aa21.57■■□□□ 1.04
CBX4-202ENST00000448310 ELF5Q9UKW6 265 aaPredicted RBP21.57■■□□□ 1.04
CBX4-202ENST00000448310 STARD9Q9P2P6 4700 aa21.57■■□□□ 1.04
CBX4-202ENST00000448310 LINC00473A8K010 186 aa21.56■■□□□ 1.04
CBX4-202ENST00000448310 BRI3O95415 125 aa21.56■■□□□ 1.04
CBX4-202ENST00000448310 DIRAS3O95661 229 aa21.56■■□□□ 1.04
CBX4-202ENST00000448310 CRYZL1O95825 349 aa21.56■■□□□ 1.04
CBX4-202ENST00000448310 AADACP22760 399 aa21.56■■□□□ 1.04
CBX4-202ENST00000448310 DUTP33316 252 aaKnown RBP21.56■■□□□ 1.04
CBX4-202ENST00000448310 TAGLNQ01995 201 aaKnown RBP21.56■■□□□ 1.04
CBX4-202ENST00000448310 ARFRP1Q13795 201 aa21.56■■□□□ 1.04
CBX4-202ENST00000448310 TBCEQ15813 527 aaPredicted RBP21.56■■□□□ 1.04
CBX4-202ENST00000448310 ZFAND6Q6FIF0 208 aa21.56■■□□□ 1.04
CBX4-202ENST00000448310 DDB2Q92466 427 aa21.56■■□□□ 1.04
CBX4-202ENST00000448310 TRAV1-2A0A0B4J238 106 aa21.55■■□□□ 1.04
CBX4-202ENST00000448310 J3QRK9 145 aa21.55■■□□□ 1.04
CBX4-202ENST00000448310 RRASP10301 218 aa21.55■■□□□ 1.04
CBX4-202ENST00000448310 RAB6AP20340 208 aa21.55■■□□□ 1.04
CBX4-202ENST00000448310 PRSS8Q16651 343 aa21.55■■□□□ 1.04
CBX4-202ENST00000448310 VMA21Q3ZAQ7 101 aa21.55■■□□□ 1.04
CBX4-202ENST00000448310 ZNF367Q7RTV3 350 aa21.55■■□□□ 1.04
CBX4-202ENST00000448310 H1FOOQ8IZA3 346 aaPredicted RBP21.55■■□□□ 1.04
CBX4-202ENST00000448310 ADAD2Q8NCV1 583 aaKnown RBP21.55■■□□□ 1.04
CBX4-202ENST00000448310 A8MZ25 164 aa21.54■■□□□ 1.04
CBX4-202ENST00000448310 MYL9P24844 172 aa21.54■■□□□ 1.04
CBX4-202ENST00000448310 TALDO1P37837 337 aa21.54■■□□□ 1.04
CBX4-202ENST00000448310 UBE2KP61086 200 aa21.54■■□□□ 1.04
CBX4-202ENST00000448310 TEX45Q8NA69 505 aa21.54■■□□□ 1.04
CBX4-202ENST00000448310 SRSF12Q8WXF0 261 aaKnown RBP21.54■■□□□ 1.04
CBX4-202ENST00000448310 ACOT12Q8WYK0 555 aa21.54■■□□□ 1.04
CBX4-202ENST00000448310 USMG5Q96IX5 58 aa21.54■■□□□ 1.04
CBX4-202ENST00000448310 CSMD3Q7Z407 3707 aa21.54■■□□□ 1.04
CBX4-202ENST00000448310 SMIM30A4D0T7 59 aa21.53■■□□□ 1.04
CBX4-202ENST00000448310 H0Y980 276 aa21.53■■□□□ 1.04
CBX4-202ENST00000448310 MPPED1O15442 326 aa21.53■■□□□ 1.04
CBX4-202ENST00000448310 PRH1P02810 166 aa21.53■■□□□ 1.04
CBX4-202ENST00000448310 CSN3P07498 182 aa21.53■■□□□ 1.04
CBX4-202ENST00000448310 RAB3BP20337 219 aa21.53■■□□□ 1.04
CBX4-202ENST00000448310 RPEL1Q2QD12 228 aa21.53■■□□□ 1.04
CBX4-202ENST00000448310 ADTRPQ96IZ2 230 aa21.53■■□□□ 1.04
CBX4-202ENST00000448310 CNBD2Q96M20 576 aa21.53■■□□□ 1.04
CBX4-202ENST00000448310 OR9G9P0C7N8 305 aa21.52■■□□□ 1.04
CBX4-202ENST00000448310 NR2C2APQ86WQ0 139 aa21.52■■□□□ 1.04
CBX4-202ENST00000448310 ATG5Q9H1Y0 275 aa21.52■■□□□ 1.04
CBX4-202ENST00000448310 EDA2RQ9HAV5 297 aa21.52■■□□□ 1.04
CBX4-202ENST00000448310 NDUFB11Q9NX14 153 aa21.52■■□□□ 1.04
CBX4-202ENST00000448310 IZUMO1RA6ND01 250 aa21.51■■□□□ 1.03
CBX4-202ENST00000448310 METTL21EPA6NDL7 271 aa21.51■■□□□ 1.03
CBX4-202ENST00000448310 Q6ZS49 121 aa21.51■■□□□ 1.03
CBX4-202ENST00000448310 LYSTQ99698 3801 aa21.51■■□□□ 1.03
CBX4-202ENST00000448310 THAP7Q9BT49 309 aaPredicted RBP21.51■■□□□ 1.03
CBX4-202ENST00000448310 TRDV1A0A1B0GX56 115 aa21.5■■□□□ 1.03
CBX4-202ENST00000448310 SAA1P0DJI8 122 aaPredicted RBP21.5■■□□□ 1.03
CBX4-202ENST00000448310 TATDN3Q17R31 274 aa21.5■■□□□ 1.03
CBX4-202ENST00000448310 C22orf42Q6IC83 251 aa21.5■■□□□ 1.03
CBX4-202ENST00000448310 ZNF430Q9H8G1 570 aaPredicted RBP21.5■■□□□ 1.03
CBX4-202ENST00000448310 AKIP1Q9NQ31 210 aa21.5■■□□□ 1.03
CBX4-202ENST00000448310 RHOGP84095 191 aa21.49■■□□□ 1.03
CBX4-202ENST00000448310 ZNF45Q02386 682 aa21.49■■□□□ 1.03
CBX4-202ENST00000448310 HAGHQ16775 308 aa21.49■■□□□ 1.03
CBX4-202ENST00000448310 C10orf55Q5SWW7 151 aa21.49■■□□□ 1.03
CBX4-202ENST00000448310 IZUMO2Q6UXV1 221 aa21.49■■□□□ 1.03
CBX4-202ENST00000448310 OSR1Q8TAX0 266 aaPredicted RBP21.49■■□□□ 1.03
CBX4-202ENST00000448310 SNAPC3Q92966 411 aa21.49■■□□□ 1.03
CBX4-202ENST00000448310 ISOC1Q96CN7 298 aa21.49■■□□□ 1.03
CBX4-202ENST00000448310 FCGR3BO75015 233 aa21.48■■□□□ 1.03
CBX4-202ENST00000448310 OR2A4O95047 310 aa21.48■■□□□ 1.03
CBX4-202ENST00000448310 EXOSC2Q13868 293 aaKnown RBP21.48■■□□□ 1.03
CBX4-202ENST00000448310 OR2B11Q5JQS5 317 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms