RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 IGHV3-72A0A0B4J1Y9 119 aa15.75■□□□□ 0.11
SGCE-207ENST00000447873 TIMM23O14925 209 aa15.75■□□□□ 0.11
SGCE-207ENST00000447873 RBFOX2O43251 390 aaKnown RBP eCLIP15.75■□□□□ 0.11
SGCE-207ENST00000447873 CD99P14209 185 aa15.75■□□□□ 0.11
SGCE-207ENST00000447873 RPA2P15927 270 aa15.75■□□□□ 0.11
SGCE-207ENST00000447873 RAB13P51153 203 aa15.75■□□□□ 0.11
SGCE-207ENST00000447873 TMEM268Q5VZI3 342 aa15.75■□□□□ 0.11
SGCE-207ENST00000447873 TMEM56Q96MV1 263 aa15.75■□□□□ 0.11
SGCE-207ENST00000447873 WASHC3Q9Y3C0 194 aa15.75■□□□□ 0.11
SGCE-207ENST00000447873 TMEM56-RWDD3S4R434 201 aa15.75■□□□□ 0.11
SGCE-207ENST00000447873 A0A0U1RQK1 487 aa15.75■□□□□ 0.11
SGCE-207ENST00000447873 CRYZL1O95825 349 aa15.75■□□□□ 0.11
SGCE-207ENST00000447873 HPRT1P00492 218 aa15.75■□□□□ 0.11
SGCE-207ENST00000447873 FSHBP01225 129 aa15.75■□□□□ 0.11
SGCE-207ENST00000447873 PDPNQ86YL7 162 aa15.75■□□□□ 0.11
SGCE-207ENST00000447873 LRTM2Q8N967 370 aa15.75■□□□□ 0.11
SGCE-207ENST00000447873 LHFPL5Q8TAF8 219 aa15.75■□□□□ 0.11
SGCE-207ENST00000447873 TMUB1Q9BVT8 246 aa15.75■□□□□ 0.11
SGCE-207ENST00000447873 MS4A7Q9GZW8 240 aaPredicted RBP15.75■□□□□ 0.11
SGCE-207ENST00000447873 PIGBOS1A0A0B4J2F0 54 aa15.74■□□□□ 0.11
SGCE-207ENST00000447873 FOSL1P15407 271 aa15.74■□□□□ 0.11
SGCE-207ENST00000447873 FAM120AOSQ5T036 256 aa15.74■□□□□ 0.11
SGCE-207ENST00000447873 DHRS7BQ6IAN0 325 aaPredicted RBP15.74■□□□□ 0.11
SGCE-207ENST00000447873 SELENOHQ8IZQ5 122 aaKnown RBP15.74■□□□□ 0.11
SGCE-207ENST00000447873 CADM3Q8N126 398 aa15.74■□□□□ 0.11
SGCE-207ENST00000447873 RBPMSQ93062 196 aaKnown RBP15.74■□□□□ 0.11
SGCE-207ENST00000447873 IL22RA2Q969J5 263 aa15.74■□□□□ 0.11
SGCE-207ENST00000447873 PLEKHA2Q9HB19 425 aa15.74■□□□□ 0.11
SGCE-207ENST00000447873 S1PR2O95136 353 aa15.73■□□□□ 0.11
SGCE-207ENST00000447873 IGKV1-16P04430 117 aa15.73■□□□□ 0.11
SGCE-207ENST00000447873 RRAS2P62070 204 aaPredicted RBP15.73■□□□□ 0.11
SGCE-207ENST00000447873 OR4C13Q8NGP0 309 aa15.73■□□□□ 0.11
SGCE-207ENST00000447873 CFHR4Q92496 578 aa15.73■□□□□ 0.11
SGCE-207ENST00000447873 FLYWCH2Q96CP2 140 aaKnown RBP15.73■□□□□ 0.11
SGCE-207ENST00000447873 RBMXL1Q96E39 390 aaKnown RBP15.73■□□□□ 0.11
SGCE-207ENST00000447873 SMR3AQ99954 134 aa15.73■□□□□ 0.11
SGCE-207ENST00000447873 DBX1A6NMT0 343 aa15.72■□□□□ 0.11
SGCE-207ENST00000447873 CYSRT1A8MQ03 144 aa15.72■□□□□ 0.11
SGCE-207ENST00000447873 IGKV1-39P01597 117 aa15.72■□□□□ 0.11
SGCE-207ENST00000447873 IGKV1D-39P04432 117 aa15.72■□□□□ 0.11
SGCE-207ENST00000447873 HOXB5P09067 269 aa15.72■□□□□ 0.11
SGCE-207ENST00000447873 FBP1P09467 338 aa15.72■□□□□ 0.11
SGCE-207ENST00000447873 CD1BP29016 333 aa15.72■□□□□ 0.11
SGCE-207ENST00000447873 BRS3P32247 399 aa15.72■□□□□ 0.11
SGCE-207ENST00000447873 HABP2Q14520 560 aaPredicted RBP15.72■□□□□ 0.11
SGCE-207ENST00000447873 LYZL2Q7Z4W2 148 aa15.72■□□□□ 0.11
SGCE-207ENST00000447873 SLC35G3Q8N808 338 aa15.72■□□□□ 0.11
SGCE-207ENST00000447873 SOX21Q9Y651 276 aaPredicted RBP15.72■□□□□ 0.11
SGCE-207ENST00000447873 SHOXO15266 292 aa15.71■□□□□ 0.11
SGCE-207ENST00000447873 ATG12O94817 140 aa15.71■□□□□ 0.11
SGCE-207ENST00000447873 KRASP01116 189 aa15.71■□□□□ 0.11
SGCE-207ENST00000447873 BCAP31P51572 246 aa15.71■□□□□ 0.11
SGCE-207ENST00000447873 AKR1C2P52895 323 aa15.71■□□□□ 0.11
SGCE-207ENST00000447873 RNASE11Q8TAA1 199 aaKnown RBP15.71■□□□□ 0.11
SGCE-207ENST00000447873 COMMD9Q9P000 198 aa15.71■□□□□ 0.11
SGCE-207ENST00000447873 DUXBA0A1W2PPF3 345 aa15.7■□□□□ 0.1
SGCE-207ENST00000447873 ADAP1O75689 374 aa15.7■□□□□ 0.1
SGCE-207ENST00000447873 VENTXO95231 258 aa15.7■□□□□ 0.1
SGCE-207ENST00000447873 LY6G6DO95868 133 aa15.7■□□□□ 0.1
SGCE-207ENST00000447873 IFNA21P01568 189 aa15.7■□□□□ 0.1
SGCE-207ENST00000447873 NQO2P16083 231 aa15.7■□□□□ 0.1
SGCE-207ENST00000447873 FCN2Q15485 313 aa15.7■□□□□ 0.1
SGCE-207ENST00000447873 IL17RELQ6ZVW7 336 aa15.7■□□□□ 0.1
SGCE-207ENST00000447873 OSR1Q8TAX0 266 aaPredicted RBP15.7■□□□□ 0.1
SGCE-207ENST00000447873 C22orf15Q8WYQ4 148 aa15.7■□□□□ 0.1
SGCE-207ENST00000447873 R3HDM4Q96D70 268 aa15.7■□□□□ 0.1
SGCE-207ENST00000447873 MEGF9Q9H1U4 602 aa15.7■□□□□ 0.1
SGCE-207ENST00000447873 RAB18Q9NP72 206 aa15.7■□□□□ 0.1
SGCE-207ENST00000447873 MGAT4CQ9UBM8 478 aa15.7■□□□□ 0.1
SGCE-207ENST00000447873 HIVEP1P15822 2718 aa15.7■□□□□ 0.1
SGCE-207ENST00000447873 SONP18583 2426 aaKnown RBP15.7■□□□□ 0.1
SGCE-207ENST00000447873 GOSR2O14653 212 aa15.7■□□□□ 0.1
SGCE-207ENST00000447873 HRASP01112 189 aa15.7■□□□□ 0.1
SGCE-207ENST00000447873 IGKV1D-33P01593 117 aa15.7■□□□□ 0.1
SGCE-207ENST00000447873 IGKV1-33P01594 117 aa15.7■□□□□ 0.1
SGCE-207ENST00000447873 HNF1AP20823 631 aa15.7■□□□□ 0.1
SGCE-207ENST00000447873 VDAC1P21796 283 aa15.7■□□□□ 0.1
SGCE-207ENST00000447873 CD24P25063 80 aa15.7■□□□□ 0.1
SGCE-207ENST00000447873 G6PCP35575 357 aa15.7■□□□□ 0.1
SGCE-207ENST00000447873 SRP14P37108 136 aaKnown RBP15.7■□□□□ 0.1
SGCE-207ENST00000447873 ERVK-16P61578 105 aa15.7■□□□□ 0.1
SGCE-207ENST00000447873 RPS16P62249 146 aaKnown RBP15.7■□□□□ 0.1
SGCE-207ENST00000447873 HES1Q14469 280 aa15.7■□□□□ 0.1
SGCE-207ENST00000447873 C2orf68Q2NKX9 166 aa15.7■□□□□ 0.1
SGCE-207ENST00000447873 TMEM177Q53S58 311 aa15.7■□□□□ 0.1
SGCE-207ENST00000447873 BCL6BQ8N143 479 aaPredicted RBP15.7■□□□□ 0.1
SGCE-207ENST00000447873 RRNAD1Q96FB5 475 aaKnown RBP15.7■□□□□ 0.1
SGCE-207ENST00000447873 HARBI1Q96MB7 349 aa15.7■□□□□ 0.1
SGCE-207ENST00000447873 TMED3Q9Y3Q3 217 aa15.7■□□□□ 0.1
SGCE-207ENST00000447873 HMX3A6NHT5 357 aa15.69■□□□□ 0.1
SGCE-207ENST00000447873 MARCH11A6NNE9 402 aa15.69■□□□□ 0.1
SGCE-207ENST00000447873 FAM25EA8MYX2 175 aa15.69■□□□□ 0.1
SGCE-207ENST00000447873 CCSO14618 274 aa15.69■□□□□ 0.1
SGCE-207ENST00000447873 SNRNP70P08621 437 aaKnown RBP15.69■□□□□ 0.1
SGCE-207ENST00000447873 SULT1A3P0DMM9 295 aa15.69■□□□□ 0.1
SGCE-207ENST00000447873 SULT1A4P0DMN0 295 aa15.69■□□□□ 0.1
SGCE-207ENST00000447873 GGNBP1Q5YKI7 109 aa15.69■□□□□ 0.1
SGCE-207ENST00000447873 C9orf139Q6ZV77 190 aa15.69■□□□□ 0.1
SGCE-207ENST00000447873 DMBX1Q8NFW5 382 aa15.69■□□□□ 0.1
SGCE-207ENST00000447873 SEC22AQ96IW7 307 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms