RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 TENM3Q9P273 2699 aa15.98■□□□□ 0.15
SDC1-205ENST00000447124 CNIH1O95406 144 aa15.97■□□□□ 0.15
SDC1-205ENST00000447124 TRGV3P03979 118 aa15.97■□□□□ 0.15
SDC1-205ENST00000447124 DTYMKP23919 212 aa15.97■□□□□ 0.15
SDC1-205ENST00000447124 HACD4Q5VWC8 232 aa15.97■□□□□ 0.15
SDC1-205ENST00000447124 TPRA1Q86W33 373 aa15.97■□□□□ 0.15
SDC1-205ENST00000447124 FCGR1BQ92637 280 aa15.97■□□□□ 0.15
SDC1-205ENST00000447124 SLA2Q9H6Q3 261 aa15.97■□□□□ 0.15
SDC1-205ENST00000447124 DAPK2Q9UIK4 370 aa15.97■□□□□ 0.15
SDC1-205ENST00000447124 SSR3Q9UNL2 185 aa15.97■□□□□ 0.15
SDC1-205ENST00000447124 RRP15Q9Y3B9 282 aaKnown RBP15.97■□□□□ 0.15
SDC1-205ENST00000447124 SHOXO15266 292 aa15.96■□□□□ 0.15
SDC1-205ENST00000447124 SDC2P34741 201 aa15.96■□□□□ 0.15
SDC1-205ENST00000447124 TAGLNQ01995 201 aaKnown RBP15.96■□□□□ 0.15
SDC1-205ENST00000447124 ARL6IP1Q15041 203 aa15.96■□□□□ 0.15
SDC1-205ENST00000447124 ACSM6Q6P461 480 aa15.96■□□□□ 0.15
SDC1-205ENST00000447124 ZNF773Q6PK81 442 aa15.96■□□□□ 0.15
SDC1-205ENST00000447124 POC5Q8NA72 575 aa15.96■□□□□ 0.15
SDC1-205ENST00000447124 NUDCD2Q8WVJ2 157 aa15.96■□□□□ 0.15
SDC1-205ENST00000447124 ASCL2Q99929 193 aa15.96■□□□□ 0.15
SDC1-205ENST00000447124 ZNF355PQ9NSJ1 428 aa15.96■□□□□ 0.15
SDC1-205ENST00000447124 TMEM235A6NFC5 223 aa15.95■□□□□ 0.14
SDC1-205ENST00000447124 SSX5O60225 188 aa15.95■□□□□ 0.14
SDC1-205ENST00000447124 SAP30O75446 220 aa15.95■□□□□ 0.14
SDC1-205ENST00000447124 NFYAP23511 347 aaPredicted RBP15.95■□□□□ 0.14
SDC1-205ENST00000447124 CD40LGP29965 261 aa15.95■□□□□ 0.14
SDC1-205ENST00000447124 SFXN4Q6P4A7 337 aa15.95■□□□□ 0.14
SDC1-205ENST00000447124 Q9H521 79 aa15.95■□□□□ 0.14
SDC1-205ENST00000447124 NBEAL2Q6ZNJ1 2754 aa15.94■□□□□ 0.14
SDC1-205ENST00000447124 LY86O95711 162 aa15.94■□□□□ 0.14
SDC1-205ENST00000447124 NHLRC4P0CG21 123 aaPredicted RBP15.94■□□□□ 0.14
SDC1-205ENST00000447124 RRASP10301 218 aa15.94■□□□□ 0.14
SDC1-205ENST00000447124 SPNP16150 400 aa15.94■□□□□ 0.14
SDC1-205ENST00000447124 RTL8BQ17RB0 113 aa15.94■□□□□ 0.14
SDC1-205ENST00000447124 TEX45Q8NA69 505 aa15.94■□□□□ 0.14
SDC1-205ENST00000447124 OR5H6Q8NGV6 325 aa15.94■□□□□ 0.14
SDC1-205ENST00000447124 LGALS14Q8TCE9 139 aa15.94■□□□□ 0.14
SDC1-205ENST00000447124 ADTRPQ96IZ2 230 aa15.94■□□□□ 0.14
SDC1-205ENST00000447124 CENPOQ9BU64 300 aa15.94■□□□□ 0.14
SDC1-205ENST00000447124 DCSTAMPQ9H295 470 aa15.94■□□□□ 0.14
SDC1-205ENST00000447124 H3BUA1 57 aa15.93■□□□□ 0.14
SDC1-205ENST00000447124 CRYZL1O95825 349 aa15.93■□□□□ 0.14
SDC1-205ENST00000447124 IGLV2-14P01704 120 aa15.93■□□□□ 0.14
SDC1-205ENST00000447124 HLA-DQB1P01920 261 aa15.93■□□□□ 0.14
SDC1-205ENST00000447124 RPL30P62888 115 aaKnown RBP15.93■□□□□ 0.14
SDC1-205ENST00000447124 MXD1Q05195 221 aa15.93■□□□□ 0.14
SDC1-205ENST00000447124 TMEM68Q96MH6 324 aa15.93■□□□□ 0.14
SDC1-205ENST00000447124 WWC2-AS2Q96NR7 200 aa15.93■□□□□ 0.14
SDC1-205ENST00000447124 OR2W1Q9Y3N9 320 aa15.93■□□□□ 0.14
SDC1-205ENST00000447124 IGKV1D-13A0A0B4J2D9 117 aa15.92■□□□□ 0.14
SDC1-205ENST00000447124 MSGN1A6NI15 193 aa15.92■□□□□ 0.14
SDC1-205ENST00000447124 RBMXL2O75526 392 aaKnown RBP15.92■□□□□ 0.14
SDC1-205ENST00000447124 BRI3O95415 125 aa15.92■□□□□ 0.14
SDC1-205ENST00000447124 CTXN2P0C2S0 81 aa15.92■□□□□ 0.14
SDC1-205ENST00000447124 APELAP0DMC3 54 aa15.92■□□□□ 0.14
SDC1-205ENST00000447124 IGKV1-13P0DP09 117 aa15.92■□□□□ 0.14
SDC1-205ENST00000447124 UBE2KP61086 200 aa15.92■□□□□ 0.14
SDC1-205ENST00000447124 DEFA5Q01523 94 aa15.92■□□□□ 0.14
SDC1-205ENST00000447124 PRSS8Q16651 343 aa15.92■□□□□ 0.14
SDC1-205ENST00000447124 CNIH2Q6PI25 160 aa15.92■□□□□ 0.14
SDC1-205ENST00000447124 IDO2Q6ZQW0 420 aa15.92■□□□□ 0.14
SDC1-205ENST00000447124 RHBDL2Q9NX52 303 aa15.92■□□□□ 0.14
SDC1-205ENST00000447124 ANKRD34BA5PLL1 514 aa15.91■□□□□ 0.14
SDC1-205ENST00000447124 PITPNAQ00169 270 aa15.91■□□□□ 0.14
SDC1-205ENST00000447124 CBX3Q13185 183 aa15.91■□□□□ 0.14
SDC1-205ENST00000447124 VMA21Q3ZAQ7 101 aa15.91■□□□□ 0.14
SDC1-205ENST00000447124 ZNF645Q8N7E2 425 aa15.91■□□□□ 0.14
SDC1-205ENST00000447124 SLC25A38Q96DW6 304 aa15.91■□□□□ 0.14
SDC1-205ENST00000447124 TINAGL1Q9GZM7 467 aaPredicted RBP15.91■□□□□ 0.14
SDC1-205ENST00000447124 RANGRFQ9HD47 186 aaPredicted RBP15.91■□□□□ 0.14
SDC1-205ENST00000447124 RBMX2Q9Y388 322 aaKnown RBP15.91■□□□□ 0.14
SDC1-205ENST00000447124 SMAD5-AS1Q9Y6J3 95 aa15.91■□□□□ 0.14
SDC1-205ENST00000447124 U3KQK5 164 aa15.91■□□□□ 0.14
SDC1-205ENST00000447124 C13orf42A0A1B0GVH6 325 aa15.9■□□□□ 0.14
SDC1-205ENST00000447124 FCGR3BO75015 233 aa15.9■□□□□ 0.14
SDC1-205ENST00000447124 GP9P14770 177 aa15.9■□□□□ 0.14
SDC1-205ENST00000447124 BRWD1-AS2P59051 145 aa15.9■□□□□ 0.14
SDC1-205ENST00000447124 GNG2P59768 71 aa15.9■□□□□ 0.14
SDC1-205ENST00000447124 EIF4EBP1Q13541 118 aaPredicted RBP15.9■□□□□ 0.14
SDC1-205ENST00000447124 HAPLN4Q86UW8 402 aa15.9■□□□□ 0.14
SDC1-205ENST00000447124 OSR1Q8TAX0 266 aaPredicted RBP15.9■□□□□ 0.14
SDC1-205ENST00000447124 ANXA10Q9UJ72 324 aa15.9■□□□□ 0.14
SDC1-205ENST00000447124 RYR3Q15413 4870 aa15.89■□□□□ 0.13
SDC1-205ENST00000447124 TRAV18A0A075B6X5 111 aa15.89■□□□□ 0.13
SDC1-205ENST00000447124 A0A0G2JLM5 398 aa15.89■□□□□ 0.13
SDC1-205ENST00000447124 LOC100506127A0A0U1RQW1 187 aa15.89■□□□□ 0.13
SDC1-205ENST00000447124 TUSC2O75896 110 aa15.89■□□□□ 0.13
SDC1-205ENST00000447124 PTHLHP12272 177 aa15.89■□□□□ 0.13
SDC1-205ENST00000447124 CD36P16671 472 aa15.89■□□□□ 0.13
SDC1-205ENST00000447124 DYRK1AQ13627 763 aa15.89■□□□□ 0.13
SDC1-205ENST00000447124 KLF5Q13887 457 aaPredicted RBP15.89■□□□□ 0.13
SDC1-205ENST00000447124 NEDD8Q15843 81 aa15.89■□□□□ 0.13
SDC1-205ENST00000447124 TNXAQ16473 311 aa15.89■□□□□ 0.13
SDC1-205ENST00000447124 IDNKQ5T6J7 187 aa15.89■□□□□ 0.13
SDC1-205ENST00000447124 IL34Q6ZMJ4 242 aa15.89■□□□□ 0.13
SDC1-205ENST00000447124 ADAD2Q8NCV1 583 aaKnown RBP15.89■□□□□ 0.13
SDC1-205ENST00000447124 OR4C12Q96R67 309 aa15.89■□□□□ 0.13
SDC1-205ENST00000447124 SCGNO76038 276 aa15.88■□□□□ 0.13
SDC1-205ENST00000447124 TRBV12-3P01733 135 aa15.88■□□□□ 0.13
SDC1-205ENST00000447124 SAA1P0DJI8 122 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms