RNA–Protein interactions for RNA: ENST00000445752.5

CCDC144B-202, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 2 BASIC

Gene CCDC144B, Length 2,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-202ENST00000445752 DYNLRB1Q9NP97 96 aa13.18□□□□□ -0.3
CCDC144B-202ENST00000445752 IDI2-AS1Q9NZ38 188 aa13.18□□□□□ -0.3
CCDC144B-202ENST00000445752 YLPM1P49750 1951 aaKnown RBP13.18□□□□□ -0.3
CCDC144B-202ENST00000445752 RELNP78509 3460 aa13.17□□□□□ -0.3
CCDC144B-202ENST00000445752 SAA2-SAA4A0A096LPE2 208 aa13.17□□□□□ -0.3
CCDC144B-202ENST00000445752 TRAV38-1A0A0B4J264 116 aa13.17□□□□□ -0.3
CCDC144B-202ENST00000445752 ZNF729A6NN14 1252 aaPredicted RBP13.17□□□□□ -0.3
CCDC144B-202ENST00000445752 MMP23AO75900 390 aa13.17□□□□□ -0.3
CCDC144B-202ENST00000445752 SAA2P0DJI9 122 aaPredicted RBP13.17□□□□□ -0.3
CCDC144B-202ENST00000445752 RPS16P62249 146 aaKnown RBP13.17□□□□□ -0.3
CCDC144B-202ENST00000445752 LRRC75BQ2VPJ9 315 aa13.17□□□□□ -0.3
CCDC144B-202ENST00000445752 PRAMEF5Q5TYX0 476 aa13.17□□□□□ -0.3
CCDC144B-202ENST00000445752 SPSB3Q6PJ21 355 aa13.17□□□□□ -0.3
CCDC144B-202ENST00000445752 CBLN2Q8IUK8 224 aa13.17□□□□□ -0.3
CCDC144B-202ENST00000445752 LYG1Q8N1E2 194 aa13.17□□□□□ -0.3
CCDC144B-202ENST00000445752 SFT2D1Q8WV19 159 aa13.17□□□□□ -0.3
CCDC144B-202ENST00000445752 RNASE6Q93091 150 aaKnown RBP13.17□□□□□ -0.3
CCDC144B-202ENST00000445752 SLC25A10Q9UBX3 287 aaPredicted RBP13.17□□□□□ -0.3
CCDC144B-202ENST00000445752 PKDREJQ9NTG1 2253 aa13.17□□□□□ -0.3
CCDC144B-202ENST00000445752 HCFC1P51610 2035 aa13.17□□□□□ -0.3
CCDC144B-202ENST00000445752 ZZEF1O43149 2961 aa13.17□□□□□ -0.3
CCDC144B-202ENST00000445752 LOC105371267A0A1B0GV96 52 aa13.17□□□□□ -0.3
CCDC144B-202ENST00000445752 TLE4Q04727 773 aa13.17□□□□□ -0.3
CCDC144B-202ENST00000445752 C1orf87Q8N0U7 546 aa13.17□□□□□ -0.3
CCDC144B-202ENST00000445752 RARRES2Q99969 163 aa13.17□□□□□ -0.3
CCDC144B-202ENST00000445752 KPTNQ9Y664 436 aa13.17□□□□□ -0.3
CCDC144B-202ENST00000445752 POLEQ07864 2286 aa13.16□□□□□ -0.3
CCDC144B-202ENST00000445752 SPTA1P02549 2419 aa13.16□□□□□ -0.3
CCDC144B-202ENST00000445752 PPIAL4EA0A075B759 164 aa13.16□□□□□ -0.3
CCDC144B-202ENST00000445752 PPIAL4DF5H284 164 aa13.16□□□□□ -0.3
CCDC144B-202ENST00000445752 TMEM178BH3BS89 294 aa13.16□□□□□ -0.3
CCDC144B-202ENST00000445752 ITGB1BP1O14713 200 aa13.16□□□□□ -0.3
CCDC144B-202ENST00000445752 IFNA17P01571 189 aa13.16□□□□□ -0.3
CCDC144B-202ENST00000445752 PPIAL4FP0DN26 164 aa13.16□□□□□ -0.3
CCDC144B-202ENST00000445752 CA7P43166 264 aa13.16□□□□□ -0.3
CCDC144B-202ENST00000445752 ERVK-16P61578 105 aa13.16□□□□□ -0.3
CCDC144B-202ENST00000445752 KLRB1Q12918 225 aa13.16□□□□□ -0.3
CCDC144B-202ENST00000445752 HNF4GQ14541 408 aa13.16□□□□□ -0.3
CCDC144B-202ENST00000445752 AKIRIN2Q53H80 203 aa13.16□□□□□ -0.3
CCDC144B-202ENST00000445752 CIB3Q96Q77 187 aaPredicted RBP13.16□□□□□ -0.3
CCDC144B-202ENST00000445752 WDR61Q9GZS3 305 aaKnown RBP13.16□□□□□ -0.3
CCDC144B-202ENST00000445752 PPIAL4AQ9Y536 164 aa13.16□□□□□ -0.3
CCDC144B-202ENST00000445752 hADV38S2A0JD32 116 aa13.15□□□□□ -0.3
CCDC144B-202ENST00000445752 CCL21O00585 134 aa13.15□□□□□ -0.3
CCDC144B-202ENST00000445752 PPIHO43447 177 aaKnown RBP13.15□□□□□ -0.3
CCDC144B-202ENST00000445752 ERVFRD-1P60508 538 aa13.15□□□□□ -0.3
CCDC144B-202ENST00000445752 DPPA3Q6W0C5 159 aa13.15□□□□□ -0.3
CCDC144B-202ENST00000445752 LINC01560Q8TB33 94 aa13.15□□□□□ -0.3
CCDC144B-202ENST00000445752 VSIRQ9H7M9 311 aa13.15□□□□□ -0.3
CCDC144B-202ENST00000445752 TMEM106BQ9NUM4 274 aa13.15□□□□□ -0.3
CCDC144B-202ENST00000445752 SPTBN4Q9H254 2564 aa13.15□□□□□ -0.3
CCDC144B-202ENST00000445752 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.15□□□□□ -0.3
CCDC144B-202ENST00000445752 RBFOX2O43251 390 aaKnown RBP eCLIP13.15□□□□□ -0.3
CCDC144B-202ENST00000445752 MRPS11P82912 194 aaKnown RBP13.15□□□□□ -0.3
CCDC144B-202ENST00000445752 CLRN3Q8NCR9 226 aa13.15□□□□□ -0.3
CCDC144B-202ENST00000445752 ZNF439Q8NDP4 499 aa13.15□□□□□ -0.3
CCDC144B-202ENST00000445752 OR4A16Q8NH70 328 aa13.15□□□□□ -0.3
CCDC144B-202ENST00000445752 DDB2Q92466 427 aa13.15□□□□□ -0.3
CCDC144B-202ENST00000445752 CORO2AQ92828 525 aa13.15□□□□□ -0.3
CCDC144B-202ENST00000445752 BTBD17A6NE02 478 aa13.14□□□□□ -0.31
CCDC144B-202ENST00000445752 RBFOX3A6NFN3 312 aa13.14□□□□□ -0.31
CCDC144B-202ENST00000445752 CD3EP07766 207 aa13.14□□□□□ -0.31
CCDC144B-202ENST00000445752 NQO2P16083 231 aa13.14□□□□□ -0.31
CCDC144B-202ENST00000445752 GRNP28799 593 aaKnown RBP13.14□□□□□ -0.31
CCDC144B-202ENST00000445752 KIR2DS2P43631 304 aa13.14□□□□□ -0.31
CCDC144B-202ENST00000445752 RPL31P62899 125 aaKnown RBP13.14□□□□□ -0.31
CCDC144B-202ENST00000445752 HAGHQ16775 308 aa13.14□□□□□ -0.31
CCDC144B-202ENST00000445752 OR10P1Q8NGE3 313 aa13.14□□□□□ -0.31
CCDC144B-202ENST00000445752 OR4S2Q8NH73 311 aa13.14□□□□□ -0.31
CCDC144B-202ENST00000445752 TAF15Q92804 592 aaKnown RBP eCLIP13.14□□□□□ -0.31
CCDC144B-202ENST00000445752 RBMXL1Q96E39 390 aaKnown RBP13.14□□□□□ -0.31
CCDC144B-202ENST00000445752 PSMG3Q9BT73 122 aaPredicted RBP13.14□□□□□ -0.31
CCDC144B-202ENST00000445752 RPRMQ9NS64 109 aa13.14□□□□□ -0.31
CCDC144B-202ENST00000445752 GAB2Q9UQC2 676 aa13.14□□□□□ -0.31
CCDC144B-202ENST00000445752 LINC00312Q9Y6C7 94 aa13.14□□□□□ -0.31
CCDC144B-202ENST00000445752 OR8U8P0C7N1 319 aa13.14□□□□□ -0.31
CCDC144B-202ENST00000445752 OR13C7P0DN81 318 aa13.14□□□□□ -0.31
CCDC144B-202ENST00000445752 ELLP55199 621 aaPredicted RBP13.14□□□□□ -0.31
CCDC144B-202ENST00000445752 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.14□□□□□ -0.31
CCDC144B-202ENST00000445752 ZNF251Q9BRH9 671 aa13.14□□□□□ -0.31
CCDC144B-202ENST00000445752 SLC35B3Q9H1N7 401 aa13.14□□□□□ -0.31
CCDC144B-202ENST00000445752 LINC00574Q9H8X3 128 aa13.14□□□□□ -0.31
CCDC144B-202ENST00000445752 TMEM140Q9NV12 185 aa13.14□□□□□ -0.31
CCDC144B-202ENST00000445752 ZNRD1Q9P1U0 126 aa13.14□□□□□ -0.31
CCDC144B-202ENST00000445752 RPUSD1Q9UJJ7 312 aaKnown RBP13.14□□□□□ -0.31
CCDC144B-202ENST00000445752 TRAV3A0A0B4J244 114 aa13.13□□□□□ -0.31
CCDC144B-202ENST00000445752 A0A1B0GW64 132 aa13.13□□□□□ -0.31
CCDC144B-202ENST00000445752 PMS2P5A8MQ11 134 aa13.13□□□□□ -0.31
CCDC144B-202ENST00000445752 PLAUP00749 431 aa13.13□□□□□ -0.31
CCDC144B-202ENST00000445752 RAB2AP61019 212 aa13.13□□□□□ -0.31
CCDC144B-202ENST00000445752 DHRS7BQ6IAN0 325 aaPredicted RBP13.13□□□□□ -0.31
CCDC144B-202ENST00000445752 H1FXQ92522 213 aaKnown RBP13.13□□□□□ -0.31
CCDC144B-202ENST00000445752 PARD6GQ9BYG4 376 aaPredicted RBP13.13□□□□□ -0.31
CCDC144B-202ENST00000445752 MS4A5Q9H3V2 200 aa13.13□□□□□ -0.31
CCDC144B-202ENST00000445752 KIAA1456Q9P272 454 aa13.13□□□□□ -0.31
CCDC144B-202ENST00000445752 NDRG3Q9UGV2 375 aa13.13□□□□□ -0.31
CCDC144B-202ENST00000445752 FAM90A9PA6NNJ1 464 aa13.13□□□□□ -0.31
CCDC144B-202ENST00000445752 FCN3O75636 299 aa13.13□□□□□ -0.31
CCDC144B-202ENST00000445752 HBE1P02100 147 aa13.13□□□□□ -0.31
CCDC144B-202ENST00000445752 CHRNB4P30926 498 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms