RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 MFSD4AQ8N468 514 aa11.22□□□□□ -0.61
SSBP3-208ENST00000444533 GDPD1Q8N9F7 314 aa11.22□□□□□ -0.61
SSBP3-208ENST00000444533 Q8N9W7 124 aa11.22□□□□□ -0.61
SSBP3-208ENST00000444533 NPBQ8NG41 125 aa11.22□□□□□ -0.61
SSBP3-208ENST00000444533 OSR1Q8TAX0 266 aaPredicted RBP11.22□□□□□ -0.61
SSBP3-208ENST00000444533 ZFAND1Q8TCF1 268 aa11.22□□□□□ -0.61
SSBP3-208ENST00000444533 DEDD2Q8WXF8 326 aa11.22□□□□□ -0.61
SSBP3-208ENST00000444533 PRRT1Q99946 306 aa11.22□□□□□ -0.61
SSBP3-208ENST00000444533 TINAGL1Q9GZM7 467 aaPredicted RBP11.22□□□□□ -0.61
SSBP3-208ENST00000444533 MCUBQ9NWR8 336 aa11.22□□□□□ -0.61
SSBP3-208ENST00000444533 METTL1Q9UBP6 276 aaKnown RBP11.22□□□□□ -0.61
SSBP3-208ENST00000444533 V9GYH0 126 aa11.22□□□□□ -0.61
SSBP3-208ENST00000444533 ANKRD20A5PA0PJZ0 165 aa11.21□□□□□ -0.61
SSBP3-208ENST00000444533 IGKV1-16P04430 117 aa11.21□□□□□ -0.61
SSBP3-208ENST00000444533 UCP3P55916 312 aa11.21□□□□□ -0.61
SSBP3-208ENST00000444533 SLC35B1P78383 322 aa11.21□□□□□ -0.61
SSBP3-208ENST00000444533 C5orf64Q2M2E5 130 aa11.21□□□□□ -0.61
SSBP3-208ENST00000444533 OR2B11Q5JQS5 317 aa11.21□□□□□ -0.61
SSBP3-208ENST00000444533 ZNF57Q68EA5 555 aaPredicted RBP11.21□□□□□ -0.61
SSBP3-208ENST00000444533 ZNF660Q6AZW8 331 aaPredicted RBP11.21□□□□□ -0.61
SSBP3-208ENST00000444533 ZNF818PQ6ZRF7 136 aa11.21□□□□□ -0.61
SSBP3-208ENST00000444533 LINC00299Q6ZSB3 139 aa11.21□□□□□ -0.61
SSBP3-208ENST00000444533 FAM71E2Q8N5Q1 922 aa11.21□□□□□ -0.61
SSBP3-208ENST00000444533 OR51H1Q8NH63 302 aa11.21□□□□□ -0.61
SSBP3-208ENST00000444533 TERB2Q8NHR7 220 aa11.21□□□□□ -0.61
SSBP3-208ENST00000444533 S100ZQ8WXG8 99 aa11.21□□□□□ -0.61
SSBP3-208ENST00000444533 SCGB3A2Q96PL1 93 aa11.21□□□□□ -0.61
SSBP3-208ENST00000444533 ZNF747Q9BV97 191 aa11.21□□□□□ -0.61
SSBP3-208ENST00000444533 PTTG2Q9NZH5 202 aa11.21□□□□□ -0.61
SSBP3-208ENST00000444533 FBN1P35555 2871 aaKnown RBP11.21□□□□□ -0.62
SSBP3-208ENST00000444533 COL6A5A8TX70 2615 aa11.21□□□□□ -0.62
SSBP3-208ENST00000444533 LINC00473A8K010 186 aa11.2□□□□□ -0.62
SSBP3-208ENST00000444533 AP4M1O00189 453 aa11.2□□□□□ -0.62
SSBP3-208ENST00000444533 ACTL6BO94805 426 aa11.2□□□□□ -0.62
SSBP3-208ENST00000444533 NDUFA3O95167 84 aa11.2□□□□□ -0.62
SSBP3-208ENST00000444533 HRASP01112 189 aa11.2□□□□□ -0.62
SSBP3-208ENST00000444533 GNRHRP30968 328 aa11.2□□□□□ -0.62
SSBP3-208ENST00000444533 LINC00205P59089 165 aa11.2□□□□□ -0.62
SSBP3-208ENST00000444533 FBLN7Q53RD9 439 aa11.2□□□□□ -0.62
SSBP3-208ENST00000444533 TMEM177Q53S58 311 aa11.2□□□□□ -0.62
SSBP3-208ENST00000444533 KLHDC1Q8N7A1 406 aa11.2□□□□□ -0.62
SSBP3-208ENST00000444533 TCTEX1D1Q8N7M0 179 aa11.2□□□□□ -0.62
SSBP3-208ENST00000444533 CCDC71LQ8N9Z2 235 aa11.2□□□□□ -0.62
SSBP3-208ENST00000444533 VSTM2AQ8TAG5 236 aa11.2□□□□□ -0.62
SSBP3-208ENST00000444533 ABHD5Q8WTS1 349 aa11.2□□□□□ -0.62
SSBP3-208ENST00000444533 CHPT1Q8WUD6 406 aa11.2□□□□□ -0.62
SSBP3-208ENST00000444533 ZNF486Q96H40 463 aaPredicted RBP11.2□□□□□ -0.62
SSBP3-208ENST00000444533 FXYD6Q9H0Q3 95 aa11.2□□□□□ -0.62
SSBP3-208ENST00000444533 PLSCR3Q9NRY6 295 aa11.2□□□□□ -0.62
SSBP3-208ENST00000444533 C14orf166Q9Y224 244 aaKnown RBP11.2□□□□□ -0.62
SSBP3-208ENST00000444533 SIGLEC9Q9Y336 463 aa11.2□□□□□ -0.62
SSBP3-208ENST00000444533 SH2D7A6NKC9 451 aaPredicted RBP11.19□□□□□ -0.62
SSBP3-208ENST00000444533 CENPXA8MT69 81 aa11.19□□□□□ -0.62
SSBP3-208ENST00000444533 SLC25A17O43808 307 aa11.19□□□□□ -0.62
SSBP3-208ENST00000444533 IGLV2-14P01704 120 aa11.19□□□□□ -0.62
SSBP3-208ENST00000444533 IGHG2P01859 326 aa11.19□□□□□ -0.62
SSBP3-208ENST00000444533 HLA-DRB1P01911 266 aa11.19□□□□□ -0.62
SSBP3-208ENST00000444533 AMY1AP04745 511 aa11.19□□□□□ -0.62
SSBP3-208ENST00000444533 RLN1P04808 185 aa11.19□□□□□ -0.62
SSBP3-208ENST00000444533 VDAC1P21796 283 aa11.19□□□□□ -0.62
SSBP3-208ENST00000444533 CNTFRP26992 372 aa11.19□□□□□ -0.62
SSBP3-208ENST00000444533 PPP5CP53041 499 aa11.19□□□□□ -0.62
SSBP3-208ENST00000444533 PROK1P58294 105 aa11.19□□□□□ -0.62
SSBP3-208ENST00000444533 ERVK-16P61578 105 aa11.19□□□□□ -0.62
SSBP3-208ENST00000444533 PSG5Q15238 335 aa11.19□□□□□ -0.62
SSBP3-208ENST00000444533 ZNF79Q15937 498 aa11.19□□□□□ -0.62
SSBP3-208ENST00000444533 PHLDA2Q53GA4 152 aa11.19□□□□□ -0.62
SSBP3-208ENST00000444533 SPAG16Q8N0X2 631 aa11.19□□□□□ -0.62
SSBP3-208ENST00000444533 OR4X2Q8NGF9 303 aa11.19□□□□□ -0.62
SSBP3-208ENST00000444533 OR4C16Q8NGL9 310 aa11.19□□□□□ -0.62
SSBP3-208ENST00000444533 WFDC12Q8WWY7 111 aa11.19□□□□□ -0.62
SSBP3-208ENST00000444533 DDB2Q92466 427 aa11.19□□□□□ -0.62
SSBP3-208ENST00000444533 C5orf30Q96GV9 206 aa11.19□□□□□ -0.62
SSBP3-208ENST00000444533 RSRP1Q9BUV0 290 aa11.19□□□□□ -0.62
SSBP3-208ENST00000444533 FBXL15Q9H469 300 aa11.19□□□□□ -0.62
SSBP3-208ENST00000444533 COPZ2Q9P299 210 aa11.19□□□□□ -0.62
SSBP3-208ENST00000444533 RBFOX2O43251 390 aaKnown RBP eCLIP11.18□□□□□ -0.62
SSBP3-208ENST00000444533 PGLYRP1O75594 196 aaPredicted RBP11.18□□□□□ -0.62
SSBP3-208ENST00000444533 CNIH1O95406 144 aa11.18□□□□□ -0.62
SSBP3-208ENST00000444533 RPL30P62888 115 aaKnown RBP11.18□□□□□ -0.62
SSBP3-208ENST00000444533 TMEM267Q0VDI3 215 aaPredicted RBP11.18□□□□□ -0.62
SSBP3-208ENST00000444533 SURF2Q15527 256 aaPredicted RBP11.18□□□□□ -0.62
SSBP3-208ENST00000444533 IDO2Q6ZQW0 420 aa11.18□□□□□ -0.62
SSBP3-208ENST00000444533 PPP1R27Q86WC6 154 aa11.18□□□□□ -0.62
SSBP3-208ENST00000444533 TEX45Q8NA69 505 aa11.18□□□□□ -0.62
SSBP3-208ENST00000444533 OR4D10Q8NGI6 311 aa11.18□□□□□ -0.62
SSBP3-208ENST00000444533 RITA1Q96K30 269 aa11.18□□□□□ -0.62
SSBP3-208ENST00000444533 CLCC1Q96S66 551 aa11.18□□□□□ -0.62
SSBP3-208ENST00000444533 SRRQ9GZT4 340 aa11.18□□□□□ -0.62
SSBP3-208ENST00000444533 SERTAD4Q9NUC0 356 aa11.18□□□□□ -0.62
SSBP3-208ENST00000444533 PSMB11A5LHX3 300 aa11.17□□□□□ -0.62
SSBP3-208ENST00000444533 HPRT1P00492 218 aa11.17□□□□□ -0.62
SSBP3-208ENST00000444533 CD40LGP29965 261 aa11.17□□□□□ -0.62
SSBP3-208ENST00000444533 UBE2KP61086 200 aa11.17□□□□□ -0.62
SSBP3-208ENST00000444533 FAAP20Q6NZ36 180 aa11.17□□□□□ -0.62
SSBP3-208ENST00000444533 Q6ZS46 218 aa11.17□□□□□ -0.62
SSBP3-208ENST00000444533 LHFPL1Q86WI0 220 aa11.17□□□□□ -0.62
SSBP3-208ENST00000444533 COMMD1Q8N668 190 aa11.17□□□□□ -0.62
SSBP3-208ENST00000444533 OR51S1Q8NGJ8 323 aa11.17□□□□□ -0.62
SSBP3-208ENST00000444533 OR51J1Q9H342 316 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms