RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 ELANEP08246 267 aa10.96□□□□□ -0.65
TREX1-202ENST00000444177 PTHLHP12272 177 aa10.96□□□□□ -0.65
TREX1-202ENST00000444177 NAT1P18440 290 aa10.96□□□□□ -0.65
TREX1-202ENST00000444177 HOXD3P31249 432 aaPredicted RBP10.96□□□□□ -0.65
TREX1-202ENST00000444177 MRPS10P82664 201 aaKnown RBP10.96□□□□□ -0.65
TREX1-202ENST00000444177 NDPQ00604 133 aa10.96□□□□□ -0.65
TREX1-202ENST00000444177 EGFEM1PQ0D2K5 195 aa10.96□□□□□ -0.65
TREX1-202ENST00000444177 FOXE3Q13461 319 aa10.96□□□□□ -0.65
TREX1-202ENST00000444177 ECSCRQ19T08 205 aa10.96□□□□□ -0.65
TREX1-202ENST00000444177 DEFB121Q5J5C9 76 aa10.96□□□□□ -0.65
TREX1-202ENST00000444177 ZNF695Q8IW36 515 aa10.96□□□□□ -0.65
TREX1-202ENST00000444177 GVQW1Q8N7I0 195 aa10.96□□□□□ -0.65
TREX1-202ENST00000444177 BEST4Q8NFU0 473 aa10.96□□□□□ -0.65
TREX1-202ENST00000444177 GPX8Q8TED1 209 aa10.96□□□□□ -0.65
TREX1-202ENST00000444177 FLYWCH2Q96CP2 140 aaKnown RBP10.96□□□□□ -0.65
TREX1-202ENST00000444177 HARBI1Q96MB7 349 aa10.96□□□□□ -0.65
TREX1-202ENST00000444177 P2RX4Q99571 388 aa10.96□□□□□ -0.65
TREX1-202ENST00000444177 TSNAXQ99598 290 aaKnown RBP10.96□□□□□ -0.65
TREX1-202ENST00000444177 RNF5Q99942 180 aa10.96□□□□□ -0.65
TREX1-202ENST00000444177 C6orf62Q9GZU0 229 aaPredicted RBP10.96□□□□□ -0.65
TREX1-202ENST00000444177 BATF3Q9NR55 127 aa10.96□□□□□ -0.65
TREX1-202ENST00000444177 GAB2Q9UQC2 676 aa10.96□□□□□ -0.65
TREX1-202ENST00000444177 TRAV41A0A0B4J266 112 aa10.95□□□□□ -0.66
TREX1-202ENST00000444177 CA2P00918 260 aa10.95□□□□□ -0.66
TREX1-202ENST00000444177 IGHG4P01861 327 aa10.95□□□□□ -0.66
TREX1-202ENST00000444177 LUMP51884 338 aaPredicted RBP10.95□□□□□ -0.66
TREX1-202ENST00000444177 PSG5Q15238 335 aa10.95□□□□□ -0.66
TREX1-202ENST00000444177 RTL8BQ17RB0 113 aa10.95□□□□□ -0.66
TREX1-202ENST00000444177 ZNF645Q8N7E2 425 aa10.95□□□□□ -0.66
TREX1-202ENST00000444177 BVESQ8NE79 360 aa10.95□□□□□ -0.66
TREX1-202ENST00000444177 DCUN1D5Q9BTE7 237 aa10.95□□□□□ -0.66
TREX1-202ENST00000444177 GPR61Q9BZJ8 451 aa10.95□□□□□ -0.66
TREX1-202ENST00000444177 IFT46Q9NQC8 304 aa10.95□□□□□ -0.66
TREX1-202ENST00000444177 TPSG1Q9NRR2 321 aa10.95□□□□□ -0.66
TREX1-202ENST00000444177 MRPS7Q9Y2R9 242 aaKnown RBP10.95□□□□□ -0.66
TREX1-202ENST00000444177 FBXO7Q9Y3I1 522 aa10.95□□□□□ -0.66
TREX1-202ENST00000444177 OR2W1Q9Y3N9 320 aa10.95□□□□□ -0.66
TREX1-202ENST00000444177 COL7A1Q02388 2944 aa10.94□□□□□ -0.66
TREX1-202ENST00000444177 MEIS3P1A6NDR6 274 aa10.94□□□□□ -0.66
TREX1-202ENST00000444177 A6NHS1 94 aa10.94□□□□□ -0.66
TREX1-202ENST00000444177 FCN1O00602 326 aa10.94□□□□□ -0.66
TREX1-202ENST00000444177 CTDSPLO15194 276 aa10.94□□□□□ -0.66
TREX1-202ENST00000444177 SLC25A17O43808 307 aa10.94□□□□□ -0.66
TREX1-202ENST00000444177 PSMB8P28062 276 aa10.94□□□□□ -0.66
TREX1-202ENST00000444177 CX3CL1P78423 397 aa10.94□□□□□ -0.66
TREX1-202ENST00000444177 ZNF660Q6AZW8 331 aaPredicted RBP10.94□□□□□ -0.66
TREX1-202ENST00000444177 PYHIN1Q6K0P9 492 aa10.94□□□□□ -0.66
TREX1-202ENST00000444177 TMEM65Q6PI78 240 aa10.94□□□□□ -0.66
TREX1-202ENST00000444177 OR5AP2Q8NGF4 316 aa10.94□□□□□ -0.66
TREX1-202ENST00000444177 DIRAS2Q96HU8 199 aa10.94□□□□□ -0.66
TREX1-202ENST00000444177 RAX2Q96IS3 184 aa10.94□□□□□ -0.66
TREX1-202ENST00000444177 ADTRPQ96IZ2 230 aa10.94□□□□□ -0.66
TREX1-202ENST00000444177 DUX3Q96PT4 197 aa10.94□□□□□ -0.66
TREX1-202ENST00000444177 FAM103A1Q9BTL3 118 aaKnown RBP10.94□□□□□ -0.66
TREX1-202ENST00000444177 MCRIP2Q9BUT9 160 aaKnown RBP10.94□□□□□ -0.66
TREX1-202ENST00000444177 IGKV1D-13A0A0B4J2D9 117 aa10.93□□□□□ -0.66
TREX1-202ENST00000444177 A0A1W2PN81 502 aa10.93□□□□□ -0.66
TREX1-202ENST00000444177 CCL24O00175 119 aa10.93□□□□□ -0.66
TREX1-202ENST00000444177 SHOXO15266 292 aa10.93□□□□□ -0.66
TREX1-202ENST00000444177 TUSC2O75896 110 aa10.93□□□□□ -0.66
TREX1-202ENST00000444177 IGKV1-13P0DP09 117 aa10.93□□□□□ -0.66
TREX1-202ENST00000444177 PPIFP30405 207 aaKnown RBP10.93□□□□□ -0.66
TREX1-202ENST00000444177 TNFSF8P32971 234 aa10.93□□□□□ -0.66
TREX1-202ENST00000444177 DUTP33316 252 aaKnown RBP10.93□□□□□ -0.66
TREX1-202ENST00000444177 S100A5P33763 92 aa10.93□□□□□ -0.66
TREX1-202ENST00000444177 RCVRNP35243 200 aa10.93□□□□□ -0.66
TREX1-202ENST00000444177 CHRNA7P36544 502 aa10.93□□□□□ -0.66
TREX1-202ENST00000444177 RAB25P57735 213 aa10.93□□□□□ -0.66
TREX1-202ENST00000444177 TAS2R46P59540 309 aa10.93□□□□□ -0.66
TREX1-202ENST00000444177 GNB1P62873 340 aa10.93□□□□□ -0.66
TREX1-202ENST00000444177 TAGLNQ01995 201 aaKnown RBP10.93□□□□□ -0.66
TREX1-202ENST00000444177 SSBP1Q04837 148 aaKnown RBP10.93□□□□□ -0.66
TREX1-202ENST00000444177 DEFB136Q30KP8 78 aa10.93□□□□□ -0.66
TREX1-202ENST00000444177 KCTD9Q7L273 389 aa10.93□□□□□ -0.66
TREX1-202ENST00000444177 SNX29P2Q8IUI4 249 aa10.93□□□□□ -0.66
TREX1-202ENST00000444177 RNF152Q8N8N0 203 aa10.93□□□□□ -0.66
TREX1-202ENST00000444177 DPF1Q92782 380 aa10.93□□□□□ -0.66
TREX1-202ENST00000444177 SNAPC3Q92966 411 aa10.93□□□□□ -0.66
TREX1-202ENST00000444177 ABHD1Q96SE0 405 aa10.93□□□□□ -0.66
TREX1-202ENST00000444177 TENM3Q9P273 2699 aa10.93□□□□□ -0.66
TREX1-202ENST00000444177 NBEAL2Q6ZNJ1 2754 aa10.92□□□□□ -0.66
TREX1-202ENST00000444177 LINC00473A8K010 186 aa10.92□□□□□ -0.66
TREX1-202ENST00000444177 GABARAPH6UMI1 98 aa10.92□□□□□ -0.66
TREX1-202ENST00000444177 CRYZL1O95825 349 aa10.92□□□□□ -0.66
TREX1-202ENST00000444177 RRASP10301 218 aa10.92□□□□□ -0.66
TREX1-202ENST00000444177 PTBP1P26599 531 aaKnown RBP eCLIP10.92□□□□□ -0.66
TREX1-202ENST00000444177 CDX1P47902 265 aaPredicted RBP10.92□□□□□ -0.66
TREX1-202ENST00000444177 CDK10Q15131 360 aa10.92□□□□□ -0.66
TREX1-202ENST00000444177 TMEM177Q53S58 311 aa10.92□□□□□ -0.66
TREX1-202ENST00000444177 OR2B11Q5JQS5 317 aa10.92□□□□□ -0.66
TREX1-202ENST00000444177 PPP1R27Q86WC6 154 aa10.92□□□□□ -0.66
TREX1-202ENST00000444177 GRPEL2Q8TAA5 225 aa10.92□□□□□ -0.66
TREX1-202ENST00000444177 DDB2Q92466 427 aa10.92□□□□□ -0.66
TREX1-202ENST00000444177 ARPC1AQ92747 370 aa10.92□□□□□ -0.66
TREX1-202ENST00000444177 SOSTQ9BQB4 213 aa10.92□□□□□ -0.66
TREX1-202ENST00000444177 FOXA2Q9Y261 457 aaPredicted RBP10.92□□□□□ -0.66
TREX1-202ENST00000444177 RBMX2Q9Y388 322 aaKnown RBP10.92□□□□□ -0.66
TREX1-202ENST00000444177 FCGR3BO75015 233 aa10.91□□□□□ -0.66
TREX1-202ENST00000444177 SLC22A5O76082 557 aa10.91□□□□□ -0.66
TREX1-202ENST00000444177 IGLV2-23P01705 113 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms