RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 C4orf3Q8WVX3 66 aa18.75■□□□□ 0.59
CPNE1-217ENST00000439669 DDB2Q92466 427 aa18.75■□□□□ 0.59
CPNE1-217ENST00000439669 ARPC1AQ92747 370 aa18.75■□□□□ 0.59
CPNE1-217ENST00000439669 P2RX4Q99571 388 aa18.75■□□□□ 0.59
CPNE1-217ENST00000439669 NAA50Q9GZZ1 169 aaKnown RBP18.75■□□□□ 0.59
CPNE1-217ENST00000439669 NECAP2Q9NVZ3 263 aa18.75■□□□□ 0.59
CPNE1-217ENST00000439669 COMMD3Q9UBI1 195 aa18.75■□□□□ 0.59
CPNE1-217ENST00000439669 RBMX2Q9Y388 322 aaKnown RBP18.75■□□□□ 0.59
CPNE1-217ENST00000439669 DUS4LO95620 317 aaKnown RBP18.74■□□□□ 0.59
CPNE1-217ENST00000439669 EGR2P11161 476 aaPredicted RBP18.74■□□□□ 0.59
CPNE1-217ENST00000439669 FXYD3Q14802 87 aa18.74■□□□□ 0.59
CPNE1-217ENST00000439669 C19orf54Q5BKX5 351 aa18.74■□□□□ 0.59
CPNE1-217ENST00000439669 ANKRD13BQ86YJ7 626 aa18.74■□□□□ 0.59
CPNE1-217ENST00000439669 NUBP2Q9Y5Y2 271 aa18.74■□□□□ 0.59
CPNE1-217ENST00000439669 GABARAPO95166 117 aa18.73■□□□□ 0.59
CPNE1-217ENST00000439669 CNIH1O95406 144 aa18.73■□□□□ 0.59
CPNE1-217ENST00000439669 EIF4EP06730 217 aaKnown RBP18.73■□□□□ 0.59
CPNE1-217ENST00000439669 FCGR2CP31995 323 aa18.73■□□□□ 0.59
CPNE1-217ENST00000439669 ACTBL2Q562R1 376 aa18.73■□□□□ 0.59
CPNE1-217ENST00000439669 GPR107Q5VW38 600 aa18.73■□□□□ 0.59
CPNE1-217ENST00000439669 FOXB2Q5VYV0 432 aa18.73■□□□□ 0.59
CPNE1-217ENST00000439669 LFNGQ8NES3 379 aa18.73■□□□□ 0.59
CPNE1-217ENST00000439669 MYOZ3Q8TDC0 251 aa18.73■□□□□ 0.59
CPNE1-217ENST00000439669 SNAPC3Q92966 411 aa18.73■□□□□ 0.59
CPNE1-217ENST00000439669 PRELID3BQ9Y3B1 194 aa18.73■□□□□ 0.59
CPNE1-217ENST00000439669 SOX15O60248 233 aa18.72■□□□□ 0.59
CPNE1-217ENST00000439669 FCGR3BO75015 233 aa18.72■□□□□ 0.59
CPNE1-217ENST00000439669 AADACP22760 399 aa18.72■□□□□ 0.59
CPNE1-217ENST00000439669 RAB9AP51151 201 aa18.72■□□□□ 0.59
CPNE1-217ENST00000439669 RORCP51449 518 aa18.72■□□□□ 0.59
CPNE1-217ENST00000439669 VMA21Q3ZAQ7 101 aa18.72■□□□□ 0.59
CPNE1-217ENST00000439669 OR2B11Q5JQS5 317 aa18.72■□□□□ 0.59
CPNE1-217ENST00000439669 ZNF491Q8N8L2 437 aa18.72■□□□□ 0.59
CPNE1-217ENST00000439669 CASTOR1Q8WTX7 329 aa18.72■□□□□ 0.59
CPNE1-217ENST00000439669 SECTM1Q8WVN6 248 aa18.72■□□□□ 0.59
CPNE1-217ENST00000439669 UBE2E2Q96LR5 201 aa18.72■□□□□ 0.59
CPNE1-217ENST00000439669 OR5B12Q96R08 314 aa18.72■□□□□ 0.59
CPNE1-217ENST00000439669 DCUN1D5Q9BTE7 237 aa18.72■□□□□ 0.59
CPNE1-217ENST00000439669 GNB4Q9HAV0 340 aa18.72■□□□□ 0.59
CPNE1-217ENST00000439669 VSIG4Q9Y279 399 aa18.72■□□□□ 0.59
CPNE1-217ENST00000439669 MRPS7Q9Y2R9 242 aaKnown RBP18.72■□□□□ 0.59
CPNE1-217ENST00000439669 SRRM4A7MD48 611 aaKnown RBP18.71■□□□□ 0.59
CPNE1-217ENST00000439669 ARPC1BO15143 372 aaKnown RBP18.71■□□□□ 0.59
CPNE1-217ENST00000439669 IGLV2-14P01704 120 aa18.71■□□□□ 0.59
CPNE1-217ENST00000439669 CRYGBP07316 175 aa18.71■□□□□ 0.59
CPNE1-217ENST00000439669 PJVKQ0ZLH3 352 aa18.71■□□□□ 0.59
CPNE1-217ENST00000439669 CTF1Q16619 201 aa18.71■□□□□ 0.59
CPNE1-217ENST00000439669 GPR141Q7Z602 305 aa18.71■□□□□ 0.59
CPNE1-217ENST00000439669 OR5AP2Q8NGF4 316 aa18.71■□□□□ 0.59
CPNE1-217ENST00000439669 OSR1Q8TAX0 266 aaPredicted RBP18.71■□□□□ 0.59
CPNE1-217ENST00000439669 TCTEX1D2Q8WW35 142 aa18.71■□□□□ 0.59
CPNE1-217ENST00000439669 ACOT12Q8WYK0 555 aa18.71■□□□□ 0.59
CPNE1-217ENST00000439669 GPR61Q9BZJ8 451 aa18.71■□□□□ 0.59
CPNE1-217ENST00000439669 TAS2R8Q9NYW2 309 aa18.71■□□□□ 0.59
CPNE1-217ENST00000439669 PPYP01298 95 aa18.7■□□□□ 0.58
CPNE1-217ENST00000439669 FXYD4P59646 89 aa18.7■□□□□ 0.58
CPNE1-217ENST00000439669 RPL30P62888 115 aaKnown RBP18.7■□□□□ 0.58
CPNE1-217ENST00000439669 CDK10Q15131 360 aa18.7■□□□□ 0.58
CPNE1-217ENST00000439669 AKIRIN2Q53H80 203 aa18.7■□□□□ 0.58
CPNE1-217ENST00000439669 REC114Q7Z4M0 266 aa18.7■□□□□ 0.58
CPNE1-217ENST00000439669 OR5M8Q8NGP6 311 aa18.7■□□□□ 0.58
CPNE1-217ENST00000439669 HSD17B10Q99714 261 aaKnown RBP18.7■□□□□ 0.58
CPNE1-217ENST00000439669 MCRIP2Q9BUT9 160 aaKnown RBP18.7■□□□□ 0.58
CPNE1-217ENST00000439669 SMIM31A0A1B0GVY4 71 aa18.69■□□□□ 0.58
CPNE1-217ENST00000439669 APOA1P02647 267 aa18.69■□□□□ 0.58
CPNE1-217ENST00000439669 CD40LGP29965 261 aa18.69■□□□□ 0.58
CPNE1-217ENST00000439669 PRSS3P35030 304 aa18.69■□□□□ 0.58
CPNE1-217ENST00000439669 UBE2KP61086 200 aa18.69■□□□□ 0.58
CPNE1-217ENST00000439669 KIAA0141Q14154 515 aaPredicted RBP18.69■□□□□ 0.58
CPNE1-217ENST00000439669 PYHIN1Q6K0P9 492 aa18.69■□□□□ 0.58
CPNE1-217ENST00000439669 IDO2Q6ZQW0 420 aa18.69■□□□□ 0.58
CPNE1-217ENST00000439669 OR11H1Q8NG94 326 aa18.69■□□□□ 0.58
CPNE1-217ENST00000439669 DPF1Q92782 380 aa18.69■□□□□ 0.58
CPNE1-217ENST00000439669 CMTM3Q96MX0 182 aa18.69■□□□□ 0.58
CPNE1-217ENST00000439669 SLC5A7Q9GZV3 580 aa18.69■□□□□ 0.58
CPNE1-217ENST00000439669 CCL28Q9NRJ3 127 aa18.69■□□□□ 0.58
CPNE1-217ENST00000439669 EHFQ9NZC4 300 aa18.69■□□□□ 0.58
CPNE1-217ENST00000439669 HPGDSO60760 199 aa18.68■□□□□ 0.58
CPNE1-217ENST00000439669 ALDH3B2P48448 385 aa18.68■□□□□ 0.58
CPNE1-217ENST00000439669 SSBP2P81877 361 aaPredicted RBP18.68■□□□□ 0.58
CPNE1-217ENST00000439669 OVCH2Q7RTZ1 564 aa18.68■□□□□ 0.58
CPNE1-217ENST00000439669 TEX45Q8NA69 505 aa18.68■□□□□ 0.58
CPNE1-217ENST00000439669 AP3S1Q92572 193 aa18.68■□□□□ 0.58
CPNE1-217ENST00000439669 MS4A10Q96PG2 267 aa18.68■□□□□ 0.58
CPNE1-217ENST00000439669 AURKAIP1Q9NWT8 199 aaPredicted RBP18.68■□□□□ 0.58
CPNE1-217ENST00000439669 TNFSF12O43508 249 aa18.67■□□□□ 0.58
CPNE1-217ENST00000439669 HOXD3P31249 432 aaPredicted RBP18.67■□□□□ 0.58
CPNE1-217ENST00000439669 TPPP2P59282 170 aa18.67■□□□□ 0.58
CPNE1-217ENST00000439669 HERV-K104P61576 105 aa18.67■□□□□ 0.58
CPNE1-217ENST00000439669 MZT2AQ6P582 158 aa18.67■□□□□ 0.58
CPNE1-217ENST00000439669 ZNF66Q6ZN08 573 aa18.67■□□□□ 0.58
CPNE1-217ENST00000439669 MFSD4AQ8N468 514 aa18.67■□□□□ 0.58
CPNE1-217ENST00000439669 OR4S2Q8NH73 311 aa18.67■□□□□ 0.58
CPNE1-217ENST00000439669 GPHA2Q96T91 129 aa18.67■□□□□ 0.58
CPNE1-217ENST00000439669 ZNF355PQ9NSJ1 428 aa18.67■□□□□ 0.58
CPNE1-217ENST00000439669 ANAPC10Q9UM13 185 aa18.67■□□□□ 0.58
CPNE1-217ENST00000439669 FAM25AB3EWG3 89 aa18.66■□□□□ 0.58
CPNE1-217ENST00000439669 FAM25CB3EWG5 89 aa18.66■□□□□ 0.58
CPNE1-217ENST00000439669 FAM25GB3EWG6 89 aa18.66■□□□□ 0.58
CPNE1-217ENST00000439669 SAA1P0DJI8 122 aaPredicted RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms