RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 PYHIN1Q6K0P9 492 aa19.31■□□□□ 0.68
RAPGEF1-206ENST00000438647 KCTD9Q7L273 389 aa19.31■□□□□ 0.68
RAPGEF1-206ENST00000438647 REC114Q7Z4M0 266 aa19.31■□□□□ 0.68
RAPGEF1-206ENST00000438647 OSR1Q8TAX0 266 aaPredicted RBP19.31■□□□□ 0.68
RAPGEF1-206ENST00000438647 ARPC1AQ92747 370 aa19.31■□□□□ 0.68
RAPGEF1-206ENST00000438647 UBE2E2Q96LR5 201 aa19.31■□□□□ 0.68
RAPGEF1-206ENST00000438647 MCRIP2Q9BUT9 160 aaKnown RBP19.31■□□□□ 0.68
RAPGEF1-206ENST00000438647 MRPS7Q9Y2R9 242 aaKnown RBP19.31■□□□□ 0.68
RAPGEF1-206ENST00000438647 IGKV1D-13A0A0B4J2D9 117 aa19.3■□□□□ 0.68
RAPGEF1-206ENST00000438647 SMIM31A0A1B0GVY4 71 aa19.3■□□□□ 0.68
RAPGEF1-206ENST00000438647 CRYZL1O95825 349 aa19.3■□□□□ 0.68
RAPGEF1-206ENST00000438647 APOA1P02647 267 aa19.3■□□□□ 0.68
RAPGEF1-206ENST00000438647 IGKV1-13P0DP09 117 aa19.3■□□□□ 0.68
RAPGEF1-206ENST00000438647 CD40LGP29965 261 aa19.3■□□□□ 0.68
RAPGEF1-206ENST00000438647 FCGR2CP31995 323 aa19.3■□□□□ 0.68
RAPGEF1-206ENST00000438647 RAB9AP51151 201 aa19.3■□□□□ 0.68
RAPGEF1-206ENST00000438647 FXYD3Q14802 87 aa19.3■□□□□ 0.68
RAPGEF1-206ENST00000438647 VMA21Q3ZAQ7 101 aa19.3■□□□□ 0.68
RAPGEF1-206ENST00000438647 ACTBL2Q562R1 376 aa19.3■□□□□ 0.68
RAPGEF1-206ENST00000438647 C19orf54Q5BKX5 351 aa19.3■□□□□ 0.68
RAPGEF1-206ENST00000438647 OR5AP2Q8NGF4 316 aa19.3■□□□□ 0.68
RAPGEF1-206ENST00000438647 OR5M8Q8NGP6 311 aa19.3■□□□□ 0.68
RAPGEF1-206ENST00000438647 RAX2Q96IS3 184 aa19.3■□□□□ 0.68
RAPGEF1-206ENST00000438647 HSD17B10Q99714 261 aaKnown RBP19.3■□□□□ 0.68
RAPGEF1-206ENST00000438647 KLK15Q9H2R5 256 aa19.3■□□□□ 0.68
RAPGEF1-206ENST00000438647 TPSG1Q9NRR2 321 aa19.3■□□□□ 0.68
RAPGEF1-206ENST00000438647 VSIG4Q9Y279 399 aa19.3■□□□□ 0.68
RAPGEF1-206ENST00000438647 CNIH1O95406 144 aa19.29■□□□□ 0.68
RAPGEF1-206ENST00000438647 MSMO1Q15800 293 aa19.29■□□□□ 0.68
RAPGEF1-206ENST00000438647 CTF1Q16619 201 aa19.29■□□□□ 0.68
RAPGEF1-206ENST00000438647 UNQ5815/PRO19632Q6UWF5 114 aa19.29■□□□□ 0.68
RAPGEF1-206ENST00000438647 OVCH2Q7RTZ1 564 aa19.29■□□□□ 0.68
RAPGEF1-206ENST00000438647 GPR141Q7Z602 305 aa19.29■□□□□ 0.68
RAPGEF1-206ENST00000438647 AP3S1Q92572 193 aa19.29■□□□□ 0.68
RAPGEF1-206ENST00000438647 SNAPC3Q92966 411 aa19.29■□□□□ 0.68
RAPGEF1-206ENST00000438647 FAM103A1Q9BTL3 118 aaKnown RBP19.29■□□□□ 0.68
RAPGEF1-206ENST00000438647 PRKDCP78527 4128 aaKnown RBP19.29■□□□□ 0.68
RAPGEF1-206ENST00000438647 MEIS3P1A6NDR6 274 aa19.28■□□□□ 0.68
RAPGEF1-206ENST00000438647 IGLV2-14P01704 120 aa19.28■□□□□ 0.68
RAPGEF1-206ENST00000438647 CRYGBP07316 175 aa19.28■□□□□ 0.68
RAPGEF1-206ENST00000438647 EGR2P11161 476 aaPredicted RBP19.28■□□□□ 0.68
RAPGEF1-206ENST00000438647 AADACP22760 399 aa19.28■□□□□ 0.68
RAPGEF1-206ENST00000438647 PRSS3P35030 304 aa19.28■□□□□ 0.68
RAPGEF1-206ENST00000438647 UBE2KP61086 200 aa19.28■□□□□ 0.68
RAPGEF1-206ENST00000438647 CDK10Q15131 360 aa19.28■□□□□ 0.68
RAPGEF1-206ENST00000438647 GPR107Q5VW38 600 aa19.28■□□□□ 0.68
RAPGEF1-206ENST00000438647 MZT2AQ6P582 158 aa19.28■□□□□ 0.68
RAPGEF1-206ENST00000438647 ZNF491Q8N8L2 437 aa19.28■□□□□ 0.68
RAPGEF1-206ENST00000438647 TEX45Q8NA69 505 aa19.28■□□□□ 0.68
RAPGEF1-206ENST00000438647 LFNGQ8NES3 379 aa19.28■□□□□ 0.68
RAPGEF1-206ENST00000438647 GRPEL2Q8TAA5 225 aa19.28■□□□□ 0.68
RAPGEF1-206ENST00000438647 NAA50Q9GZZ1 169 aaKnown RBP19.28■□□□□ 0.68
RAPGEF1-206ENST00000438647 SRRM4A7MD48 611 aaKnown RBP19.27■□□□□ 0.68
RAPGEF1-206ENST00000438647 FCGR3BO75015 233 aa19.27■□□□□ 0.68
RAPGEF1-206ENST00000438647 PPYP01298 95 aa19.27■□□□□ 0.68
RAPGEF1-206ENST00000438647 EIF4EP06730 217 aaKnown RBP19.27■□□□□ 0.68
RAPGEF1-206ENST00000438647 FCER2P06734 321 aa19.27■□□□□ 0.68
RAPGEF1-206ENST00000438647 GNB1P62873 340 aa19.27■□□□□ 0.68
RAPGEF1-206ENST00000438647 DEFB136Q30KP8 78 aa19.27■□□□□ 0.68
RAPGEF1-206ENST00000438647 ZNF66Q6ZN08 573 aa19.27■□□□□ 0.68
RAPGEF1-206ENST00000438647 SECTM1Q8WVN6 248 aa19.27■□□□□ 0.68
RAPGEF1-206ENST00000438647 DPF1Q92782 380 aa19.27■□□□□ 0.68
RAPGEF1-206ENST00000438647 DUX3Q96PT4 197 aa19.27■□□□□ 0.68
RAPGEF1-206ENST00000438647 DCUN1D5Q9BTE7 237 aa19.27■□□□□ 0.68
RAPGEF1-206ENST00000438647 DNAH3Q8TD57 4116 aa19.27■□□□□ 0.68
RAPGEF1-206ENST00000438647 SOX15O60248 233 aa19.26■□□□□ 0.67
RAPGEF1-206ENST00000438647 CREBL2O60519 120 aaPredicted RBP19.26■□□□□ 0.67
RAPGEF1-206ENST00000438647 ALDH3B2P48448 385 aa19.26■□□□□ 0.67
RAPGEF1-206ENST00000438647 RAB25P57735 213 aa19.26■□□□□ 0.67
RAPGEF1-206ENST00000438647 RUNX1Q01196 453 aa19.26■□□□□ 0.67
RAPGEF1-206ENST00000438647 KIAA0141Q14154 515 aaPredicted RBP19.26■□□□□ 0.67
RAPGEF1-206ENST00000438647 FOXB2Q5VYV0 432 aa19.26■□□□□ 0.67
RAPGEF1-206ENST00000438647 ZBTB34Q8NCN2 500 aa19.26■□□□□ 0.67
RAPGEF1-206ENST00000438647 OR4S2Q8NH73 311 aa19.26■□□□□ 0.67
RAPGEF1-206ENST00000438647 TCTEX1D2Q8WW35 142 aa19.26■□□□□ 0.67
RAPGEF1-206ENST00000438647 GIMAP1Q8WWP7 306 aa19.26■□□□□ 0.67
RAPGEF1-206ENST00000438647 TMEM68Q96MH6 324 aa19.26■□□□□ 0.67
RAPGEF1-206ENST00000438647 ANAPC10Q9UM13 185 aa19.26■□□□□ 0.67
RAPGEF1-206ENST00000438647 ARPC1BO15143 372 aaKnown RBP19.25■□□□□ 0.67
RAPGEF1-206ENST00000438647 TAS2R46P59540 309 aa19.25■□□□□ 0.67
RAPGEF1-206ENST00000438647 RPL30P62888 115 aaKnown RBP19.25■□□□□ 0.67
RAPGEF1-206ENST00000438647 PJVKQ0ZLH3 352 aa19.25■□□□□ 0.67
RAPGEF1-206ENST00000438647 SLA2Q9H6Q3 261 aa19.25■□□□□ 0.67
RAPGEF1-206ENST00000438647 TAS2R8Q9NYW2 309 aa19.25■□□□□ 0.67
RAPGEF1-206ENST00000438647 ZNF182P17025 639 aaPredicted RBP19.24■□□□□ 0.67
RAPGEF1-206ENST00000438647 HERV-K104P61576 105 aa19.24■□□□□ 0.67
RAPGEF1-206ENST00000438647 EIF4EBP1Q13541 118 aaPredicted RBP19.24■□□□□ 0.67
RAPGEF1-206ENST00000438647 MFSD4AQ8N468 514 aa19.24■□□□□ 0.67
RAPGEF1-206ENST00000438647 OR11H1Q8NG94 326 aa19.24■□□□□ 0.67
RAPGEF1-206ENST00000438647 BORCS5Q969J3 196 aa19.24■□□□□ 0.67
RAPGEF1-206ENST00000438647 SLC5A7Q9GZV3 580 aa19.24■□□□□ 0.67
RAPGEF1-206ENST00000438647 GNB4Q9HAV0 340 aa19.24■□□□□ 0.67
RAPGEF1-206ENST00000438647 SCPEP1Q9HB40 452 aa19.24■□□□□ 0.67
RAPGEF1-206ENST00000438647 EHFQ9NZC4 300 aa19.24■□□□□ 0.67
RAPGEF1-206ENST00000438647 I3L521 148 aa19.23■□□□□ 0.67
RAPGEF1-206ENST00000438647 HPGDSO60760 199 aa19.23■□□□□ 0.67
RAPGEF1-206ENST00000438647 NAT1P18440 290 aa19.23■□□□□ 0.67
RAPGEF1-206ENST00000438647 KIR2DS2P43631 304 aa19.23■□□□□ 0.67
RAPGEF1-206ENST00000438647 FXYD4P59646 89 aa19.23■□□□□ 0.67
RAPGEF1-206ENST00000438647 SSBP2P81877 361 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 970.1 ms