RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 NPDC1Q9NQX5 325 aaPredicted RBP10.02□□□□□ -0.81
PTCH1-209ENST00000437951 RNF7Q9UBF6 113 aa10.02□□□□□ -0.81
PTCH1-209ENST00000437951 PCOLCE2Q9UKZ9 415 aa10.02□□□□□ -0.81
PTCH1-209ENST00000437951 GPR132Q9UNW8 380 aa10.02□□□□□ -0.81
PTCH1-209ENST00000437951 ALS2Q96Q42 1657 aa10.02□□□□□ -0.81
PTCH1-209ENST00000437951 TMPRSS2O15393 492 aa10.02□□□□□ -0.81
PTCH1-209ENST00000437951 MAJINQ3KP22 176 aa10.02□□□□□ -0.81
PTCH1-209ENST00000437951 DCAF12L2Q5VW00 463 aa10.02□□□□□ -0.81
PTCH1-209ENST00000437951 ATOH7Q8N100 152 aa10.02□□□□□ -0.81
PTCH1-209ENST00000437951 MS4A6AQ9H2W1 248 aa10.02□□□□□ -0.81
PTCH1-209ENST00000437951 HOXA3O43365 443 aaPredicted RBP10.01□□□□□ -0.81
PTCH1-209ENST00000437951 PDCD1Q15116 288 aa10.01□□□□□ -0.81
PTCH1-209ENST00000437951 AMER3Q8N944 861 aa10.01□□□□□ -0.81
PTCH1-209ENST00000437951 NEU1Q99519 415 aa10.01□□□□□ -0.81
PTCH1-209ENST00000437951 OTX1P32242 354 aaPredicted RBP10.01□□□□□ -0.81
PTCH1-209ENST00000437951 IFITM2Q01629 132 aa10.01□□□□□ -0.81
PTCH1-209ENST00000437951 SRSF6Q13247 344 aaKnown RBP10.01□□□□□ -0.81
PTCH1-209ENST00000437951 RNFT1Q5M7Z0 435 aa10.01□□□□□ -0.81
PTCH1-209ENST00000437951 TM4SF4P48230 202 aa10.01□□□□□ -0.81
PTCH1-209ENST00000437951 LDLRAD2Q5SZI1 272 aa10.01□□□□□ -0.81
PTCH1-209ENST00000437951 THSD4Q6ZMP0 1018 aa10.01□□□□□ -0.81
PTCH1-209ENST00000437951 TMEM91Q6ZNR0 172 aa10.01□□□□□ -0.81
PTCH1-209ENST00000437951 SRSF12Q8WXF0 261 aaKnown RBP10.01□□□□□ -0.81
PTCH1-209ENST00000437951 C14orf144Q96I85 54 aa10.01□□□□□ -0.81
PTCH1-209ENST00000437951 PHF3Q92576 2039 aaKnown RBP10.01□□□□□ -0.81
PTCH1-209ENST00000437951 PLXNB2O15031 1838 aa10.01□□□□□ -0.81
PTCH1-209ENST00000437951 ATAD5Q96QE3 1844 aa10.01□□□□□ -0.81
PTCH1-209ENST00000437951 TRAV9-2A0A087WT02 112 aa10.01□□□□□ -0.81
PTCH1-209ENST00000437951 IFNL4K9M1U5 179 aa10.01□□□□□ -0.81
PTCH1-209ENST00000437951 CDC42EP2O14613 210 aa10.01□□□□□ -0.81
PTCH1-209ENST00000437951 ESDP10768 282 aa10.01□□□□□ -0.81
PTCH1-209ENST00000437951 MDKP21741 143 aaPredicted RBP10.01□□□□□ -0.81
PTCH1-209ENST00000437951 ASIPP42127 132 aa10.01□□□□□ -0.81
PTCH1-209ENST00000437951 HSD52Q0P140 79 aa10.01□□□□□ -0.81
PTCH1-209ENST00000437951 CT83Q5H943 113 aa10.01□□□□□ -0.81
PTCH1-209ENST00000437951 CACNA1EQ15878 2313 aa10.01□□□□□ -0.81
PTCH1-209ENST00000437951 TRAV8-6A0A0B4J262 113 aa10.01□□□□□ -0.81
PTCH1-209ENST00000437951 FAM90A27PA6NNH2 459 aa10.01□□□□□ -0.81
PTCH1-209ENST00000437951 SSBP2P81877 361 aaPredicted RBP10.01□□□□□ -0.81
PTCH1-209ENST00000437951 MGAT2Q10469 447 aa10.01□□□□□ -0.81
PTCH1-209ENST00000437951 PRR7Q8TB68 274 aa10.01□□□□□ -0.81
PTCH1-209ENST00000437951 ARAP2Q8WZ64 1704 aa10.01□□□□□ -0.81
PTCH1-209ENST00000437951 ATG4DQ86TL0 474 aaPredicted RBP10.01□□□□□ -0.81
PTCH1-209ENST00000437951 GRIFINA4D1Z8 144 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 ZNF815PA8K554 130 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 H3BUT2 72 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 CNTFRP26992 372 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 SUMO2P61956 95 aaKnown RBP10□□□□□ -0.81
PTCH1-209ENST00000437951 RTP5Q14D33 572 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 ZNF324BQ6AW86 544 aaPredicted RBP10□□□□□ -0.81
PTCH1-209ENST00000437951 VKORC1L1Q8N0U8 176 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 TRBV20OR9-2A0A075B6H5 130 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 COX7A1P24310 79 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 ZNF83P51522 516 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 C2orf68Q2NKX9 166 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 RABAC1Q9UI14 185 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 SDK2Q58EX2 2172 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 PGPA6NDG6 321 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 UCP3P55916 312 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 TMEM170BQ5T4T1 132 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 TNFRSF19Q9NS68 423 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 ATXN8Q156A1 80 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 KLHDC9Q8NEP7 349 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 OR9G4Q8NGQ1 327 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10□□□□□ -0.811e-6■■■■□ 23.7
PTCH1-209ENST00000437951 A0A1W2PRS3 328 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 LIPT2A6NK58 231 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 CHCHD1Q96BP2 118 aaKnown RBP10□□□□□ -0.81
PTCH1-209ENST00000437951 LPAR2Q9HBW0 351 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 LGALS1P09382 135 aaKnown RBP10□□□□□ -0.81
PTCH1-209ENST00000437951 RIPPLY3P57055 190 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 RUNX1Q01196 453 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 PAX2Q02962 417 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 ORAOV1Q8WV07 137 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 CENPWQ5EE01 88 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 ASCL4Q6XD76 172 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 FBLIM1Q8WUP2 373 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 TMEM170AQ8WVE7 144 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 CCL17Q92583 94 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 CITED1Q99966 193 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 SH3BGRL3Q9H299 93 aa10□□□□□ -0.81
PTCH1-209ENST00000437951 IZUMO1RA6ND01 250 aa9.99□□□□□ -0.81
PTCH1-209ENST00000437951 RPL8P62917 257 aaKnown RBP9.99□□□□□ -0.81
PTCH1-209ENST00000437951 TBR1Q16650 682 aa9.99□□□□□ -0.81
PTCH1-209ENST00000437951 CYP2G1PQ6ZSU1 146 aa9.99□□□□□ -0.81
PTCH1-209ENST00000437951 SPEM1Q8N4L4 309 aa9.99□□□□□ -0.81
PTCH1-209ENST00000437951 GPR146Q96CH1 333 aa9.99□□□□□ -0.81
PTCH1-209ENST00000437951 SOSTQ9BQB4 213 aa9.99□□□□□ -0.81
PTCH1-209ENST00000437951 OR2H1Q9GZK4 316 aa9.99□□□□□ -0.81
PTCH1-209ENST00000437951 LINC00587B1AMM8 73 aa9.99□□□□□ -0.81
PTCH1-209ENST00000437951 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.99□□□□□ -0.81
PTCH1-209ENST00000437951 SAXO1Q8IYX7 474 aa9.99□□□□□ -0.81
PTCH1-209ENST00000437951 DNASE2BQ8WZ79 361 aa9.99□□□□□ -0.81
PTCH1-209ENST00000437951 DDB2Q92466 427 aa9.99□□□□□ -0.81
PTCH1-209ENST00000437951 C8orf44Q96CB5 159 aa9.99□□□□□ -0.81
PTCH1-209ENST00000437951 WNT10AQ9GZT5 417 aa9.99□□□□□ -0.81
PTCH1-209ENST00000437951 TRBV7-9A0A0J9YWB2 115 aa9.99□□□□□ -0.81
PTCH1-209ENST00000437951 FGF12P61328 243 aa9.99□□□□□ -0.81
PTCH1-209ENST00000437951 ERVK11-1P61568 191 aa9.99□□□□□ -0.81
PTCH1-209ENST00000437951 ZNF146Q15072 292 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms