RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 MSRB2Q9Y3D2 182 aa15.44■□□□□ 0.06
CLK1-205ENST00000434813 IGLV3-9A0A075B6K5 115 aa15.43■□□□□ 0.06
CLK1-205ENST00000434813 F2RL2O00254 374 aa15.43■□□□□ 0.06
CLK1-205ENST00000434813 PROP1O75360 226 aa15.43■□□□□ 0.06
CLK1-205ENST00000434813 RBMXL2O75526 392 aaKnown RBP15.43■□□□□ 0.06
CLK1-205ENST00000434813 IFNA17P01571 189 aa15.43■□□□□ 0.06
CLK1-205ENST00000434813 MBP02144 154 aa15.43■□□□□ 0.06
CLK1-205ENST00000434813 ELOBQ15370 118 aa15.43■□□□□ 0.06
CLK1-205ENST00000434813 LTC4SQ16873 150 aa15.43■□□□□ 0.06
CLK1-205ENST00000434813 RPRMLQ8N4K4 120 aa15.43■□□□□ 0.06
CLK1-205ENST00000434813 CEBPZOSA8MTT3 80 aa15.43■□□□□ 0.06
CLK1-205ENST00000434813 FGF7P21781 194 aa15.43■□□□□ 0.06
CLK1-205ENST00000434813 MOGAT3Q86VF5 341 aa15.43■□□□□ 0.06
CLK1-205ENST00000434813 IQCF2Q8IXL9 164 aa15.43■□□□□ 0.06
CLK1-205ENST00000434813 LHX4Q969G2 390 aa15.43■□□□□ 0.06
CLK1-205ENST00000434813 SLC39A9Q9NUM3 307 aa15.43■□□□□ 0.06
CLK1-205ENST00000434813 CACNA1AO00555 2505 aa15.42■□□□□ 0.06
CLK1-205ENST00000434813 IGHV3OR15-7A0A075B7D8 119 aa15.42■□□□□ 0.06
CLK1-205ENST00000434813 ATXN7O15265 892 aaPredicted RBP15.42■□□□□ 0.06
CLK1-205ENST00000434813 RBFOX2O43251 390 aaKnown RBP eCLIP15.42■□□□□ 0.06
CLK1-205ENST00000434813 LY86O95711 162 aa15.42■□□□□ 0.06
CLK1-205ENST00000434813 HPRT1P00492 218 aa15.42■□□□□ 0.06
CLK1-205ENST00000434813 LHBP01229 141 aa15.42■□□□□ 0.06
CLK1-205ENST00000434813 S100A8P05109 93 aa15.42■□□□□ 0.06
CLK1-205ENST00000434813 TIMP3P35625 211 aa15.42■□□□□ 0.06
CLK1-205ENST00000434813 LOXL3P58215 753 aa15.42■□□□□ 0.06
CLK1-205ENST00000434813 GNB2P62879 340 aa15.42■□□□□ 0.06
CLK1-205ENST00000434813 SPRNQ5BIV9 151 aa15.42■□□□□ 0.06
CLK1-205ENST00000434813 Q8WTZ3 238 aa15.42■□□□□ 0.06
CLK1-205ENST00000434813 ABHD17AQ96GS6 310 aa15.42■□□□□ 0.06
CLK1-205ENST00000434813 CTXND1A0A1B0GTU2 59 aa15.41■□□□□ 0.06
CLK1-205ENST00000434813 PCP4L1A6NKN8 68 aa15.41■□□□□ 0.06
CLK1-205ENST00000434813 MDKP21741 143 aaPredicted RBP15.41■□□□□ 0.06
CLK1-205ENST00000434813 FABP9Q0Z7S8 132 aa15.41■□□□□ 0.06
CLK1-205ENST00000434813 ALKBH2Q6NS38 261 aa15.41■□□□□ 0.06
CLK1-205ENST00000434813 FAM180AQ6UWF9 173 aa15.41■□□□□ 0.06
CLK1-205ENST00000434813 RBMS3Q6XE24 437 aaKnown RBP15.41■□□□□ 0.06
CLK1-205ENST00000434813 DMXL2Q8TDJ6 3036 aa15.41■□□□□ 0.06
CLK1-205ENST00000434813 QTRT1Q9BXR0 403 aaKnown RBP15.41■□□□□ 0.06
CLK1-205ENST00000434813 NPCDR1Q9BY65 106 aa15.41■□□□□ 0.06
CLK1-205ENST00000434813 NCOR1P1Q9H4R4 102 aa15.41■□□□□ 0.06
CLK1-205ENST00000434813 HEATR1Q9H583 2144 aaKnown RBP15.41■□□□□ 0.06
CLK1-205ENST00000434813 FCGR3BO75015 233 aa15.41■□□□□ 0.06
CLK1-205ENST00000434813 OR9G9P0C7N8 305 aa15.41■□□□□ 0.06
CLK1-205ENST00000434813 GATA4P43694 442 aa15.41■□□□□ 0.06
CLK1-205ENST00000434813 TFF3Q07654 80 aa15.41■□□□□ 0.06
CLK1-205ENST00000434813 ZNF343Q6P1L6 599 aa15.41■□□□□ 0.06
CLK1-205ENST00000434813 ZNRF1Q8ND25 227 aa15.41■□□□□ 0.06
CLK1-205ENST00000434813 SFXN3Q9BWM7 321 aa15.41■□□□□ 0.06
CLK1-205ENST00000434813 IFI27L2Q9H2X8 130 aa15.41■□□□□ 0.06
CLK1-205ENST00000434813 OR6C3Q9NZP0 311 aa15.41■□□□□ 0.06
CLK1-205ENST00000434813 DIDO1Q9BTC0 2240 aaKnown RBP15.4■□□□□ 0.06
CLK1-205ENST00000434813 CACNA1DQ01668 2161 aa15.4■□□□□ 0.06
CLK1-205ENST00000434813 CEP295Q9C0D2 2601 aa15.4■□□□□ 0.06
CLK1-205ENST00000434813 C15orf62A8K5M9 175 aa15.4■□□□□ 0.06
CLK1-205ENST00000434813 M0R1X1 148 aa15.4■□□□□ 0.06
CLK1-205ENST00000434813 ERVFRD-1P60508 538 aa15.4■□□□□ 0.06
CLK1-205ENST00000434813 SPINK9Q5DT21 86 aa15.4■□□□□ 0.06
CLK1-205ENST00000434813 ITLN1Q8WWA0 313 aa15.4■□□□□ 0.06
CLK1-205ENST00000434813 SLC25A22Q9H936 323 aa15.4■□□□□ 0.06
CLK1-205ENST00000434813 TMEM242Q9NWH2 141 aa15.4■□□□□ 0.06
CLK1-205ENST00000434813 CALYQ9NYX4 217 aa15.4■□□□□ 0.06
CLK1-205ENST00000434813 NCOR2Q9Y618 2525 aa15.4■□□□□ 0.06
CLK1-205ENST00000434813 K7ENP7 123 aa15.39■□□□□ 0.05
CLK1-205ENST00000434813 AP4M1O00189 453 aa15.39■□□□□ 0.05
CLK1-205ENST00000434813 SPRY3O43610 288 aa15.39■□□□□ 0.05
CLK1-205ENST00000434813 SMIM6P0DI80 62 aa15.39■□□□□ 0.05
CLK1-205ENST00000434813 RPS10P46783 165 aaKnown RBP15.39■□□□□ 0.05
CLK1-205ENST00000434813 FFAR4Q5NUL3 377 aa15.39■□□□□ 0.05
CLK1-205ENST00000434813 OR10G9Q8NGN4 311 aa15.39■□□□□ 0.05
CLK1-205ENST00000434813 OR10G7Q8NGN6 311 aa15.39■□□□□ 0.05
CLK1-205ENST00000434813 Q8TCH9 128 aa15.39■□□□□ 0.05
CLK1-205ENST00000434813 SDF2L1Q9HCN8 221 aa15.39■□□□□ 0.05
CLK1-205ENST00000434813 TP53TG5Q9Y2B4 290 aa15.39■□□□□ 0.05
CLK1-205ENST00000434813 ITGB1BP1O14713 200 aa15.39■□□□□ 0.05
CLK1-205ENST00000434813 CYB5R3P00387 301 aaPredicted RBP15.39■□□□□ 0.05
CLK1-205ENST00000434813 CXCL1P09341 107 aa15.39■□□□□ 0.05
CLK1-205ENST00000434813 CGB3P0DN86 165 aa15.39■□□□□ 0.05
CLK1-205ENST00000434813 CGB7P0DN87 165 aa15.39■□□□□ 0.05
CLK1-205ENST00000434813 EDDM3BP56851 147 aa15.39■□□□□ 0.05
CLK1-205ENST00000434813 MEF2BQ02080 365 aaPredicted RBP15.39■□□□□ 0.05
CLK1-205ENST00000434813 HNF4GQ14541 408 aa15.39■□□□□ 0.05
CLK1-205ENST00000434813 PDLIM3Q53GG5 364 aaPredicted RBP15.39■□□□□ 0.05
CLK1-205ENST00000434813 KRTCAP3Q53RY4 240 aa15.39■□□□□ 0.05
CLK1-205ENST00000434813 PRAMEF5Q5TYX0 476 aa15.39■□□□□ 0.05
CLK1-205ENST00000434813 VHLLQ6RSH7 139 aa15.39■□□□□ 0.05
CLK1-205ENST00000434813 FAM222BQ8WU58 562 aa15.39■□□□□ 0.05
CLK1-205ENST00000434813 PLPPR2Q96GM1 343 aa15.39■□□□□ 0.05
CLK1-205ENST00000434813 APC2O95996 2303 aa15.39■□□□□ 0.05
CLK1-205ENST00000434813 C17orf112F2Z3M2 114 aa15.38■□□□□ 0.05
CLK1-205ENST00000434813 NDUFS6O75380 124 aaKnown RBP15.38■□□□□ 0.05
CLK1-205ENST00000434813 KIR2DS2P43631 304 aa15.38■□□□□ 0.05
CLK1-205ENST00000434813 RND2P52198 227 aa15.38■□□□□ 0.05
CLK1-205ENST00000434813 CD81P60033 236 aa15.38■□□□□ 0.05
CLK1-205ENST00000434813 RPL39P5Q59GN2 51 aa15.38■□□□□ 0.05
CLK1-205ENST00000434813 ZNF709Q8N972 641 aa15.38■□□□□ 0.05
CLK1-205ENST00000434813 OR52E5Q8NH55 327 aa15.38■□□□□ 0.05
CLK1-205ENST00000434813 TCEAL7Q9BRU2 100 aa15.38■□□□□ 0.05
CLK1-205ENST00000434813 ACTR3CQ9C0K3 210 aaPredicted RBP15.38■□□□□ 0.05
CLK1-205ENST00000434813 RAB9BQ9NP90 201 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms