RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 HLA-DMAP28067 261 aa14.44□□□□□ -0.1
HLA-F-220ENST00000434407 CRIP2P52943 208 aaPredicted RBP14.44□□□□□ -0.1
HLA-F-220ENST00000434407 TREML4Q6UXN2 200 aa14.44□□□□□ -0.1
HLA-F-220ENST00000434407 ZNF66Q6ZN08 573 aa14.44□□□□□ -0.1
HLA-F-220ENST00000434407 ZNF329Q86UD4 541 aa14.44□□□□□ -0.1
HLA-F-220ENST00000434407 COMMD1Q8N668 190 aa14.44□□□□□ -0.1
HLA-F-220ENST00000434407 OR4X2Q8NGF9 303 aa14.44□□□□□ -0.1
HLA-F-220ENST00000434407 MOB3AQ96BX8 217 aa14.44□□□□□ -0.1
HLA-F-220ENST00000434407 SOSTQ9BQB4 213 aa14.44□□□□□ -0.1
HLA-F-220ENST00000434407 DCUN1D5Q9BTE7 237 aa14.44□□□□□ -0.1
HLA-F-220ENST00000434407 CCL28Q9NRJ3 127 aa14.44□□□□□ -0.1
HLA-F-220ENST00000434407 KLK11Q9UBX7 282 aa14.44□□□□□ -0.1
HLA-F-220ENST00000434407 TSPAN15O95858 294 aa14.43□□□□□ -0.1
HLA-F-220ENST00000434407 CSF1P09603 554 aa14.43□□□□□ -0.1
HLA-F-220ENST00000434407 BRWD1-AS2P59051 145 aa14.43□□□□□ -0.1
HLA-F-220ENST00000434407 SLC35B1P78383 322 aa14.43□□□□□ -0.1
HLA-F-220ENST00000434407 MRPS10P82664 201 aaKnown RBP14.43□□□□□ -0.1
HLA-F-220ENST00000434407 NDPQ00604 133 aa14.43□□□□□ -0.1
HLA-F-220ENST00000434407 CBX3Q13185 183 aa14.43□□□□□ -0.1
HLA-F-220ENST00000434407 KCTD9Q7L273 389 aa14.43□□□□□ -0.1
HLA-F-220ENST00000434407 MFSD4AQ8N468 514 aa14.43□□□□□ -0.1
HLA-F-220ENST00000434407 MCFD2Q8NI22 146 aa14.43□□□□□ -0.1
HLA-F-220ENST00000434407 DIRAS2Q96HU8 199 aa14.43□□□□□ -0.1
HLA-F-220ENST00000434407 HARBI1Q96MB7 349 aa14.43□□□□□ -0.1
HLA-F-220ENST00000434407 ZNF2Q9BSG1 426 aaPredicted RBP14.43□□□□□ -0.1
HLA-F-220ENST00000434407 GON7Q9BXV9 100 aa14.43□□□□□ -0.1
HLA-F-220ENST00000434407 C6orf62Q9GZU0 229 aaPredicted RBP14.43□□□□□ -0.1
HLA-F-220ENST00000434407 SLC5A7Q9GZV3 580 aa14.43□□□□□ -0.1
HLA-F-220ENST00000434407 METTL1Q9UBP6 276 aaKnown RBP14.43□□□□□ -0.1
HLA-F-220ENST00000434407 PRELID3BQ9Y3B1 194 aa14.43□□□□□ -0.1
HLA-F-220ENST00000434407 TSSC4Q9Y5U2 329 aaPredicted RBP14.43□□□□□ -0.1
HLA-F-220ENST00000434407 A3GALT2U3KPV4 340 aa14.43□□□□□ -0.1
HLA-F-220ENST00000434407 NOTCH1P46531 2555 aa14.43□□□□□ -0.1
HLA-F-220ENST00000434407 GABARAPH6UMI1 98 aa14.42□□□□□ -0.1
HLA-F-220ENST00000434407 CTDSPLO15194 276 aa14.42□□□□□ -0.1
HLA-F-220ENST00000434407 SLC25A17O43808 307 aa14.42□□□□□ -0.1
HLA-F-220ENST00000434407 CRYZL1O95825 349 aa14.42□□□□□ -0.1
HLA-F-220ENST00000434407 OPN1MWP04001 364 aa14.42□□□□□ -0.1
HLA-F-220ENST00000434407 OPN1MW2P0DN77 364 aa14.42□□□□□ -0.1
HLA-F-220ENST00000434407 OPN1MW3P0DN78 364 aa14.42□□□□□ -0.1
HLA-F-220ENST00000434407 GNRHRP30968 328 aa14.42□□□□□ -0.1
HLA-F-220ENST00000434407 FXYD4P59646 89 aa14.42□□□□□ -0.1
HLA-F-220ENST00000434407 CX3CL1P78423 397 aa14.42□□□□□ -0.1
HLA-F-220ENST00000434407 SSBP1Q04837 148 aaKnown RBP14.42□□□□□ -0.1
HLA-F-220ENST00000434407 ACTBL2Q562R1 376 aa14.42□□□□□ -0.1
HLA-F-220ENST00000434407 C19orf54Q5BKX5 351 aa14.42□□□□□ -0.1
HLA-F-220ENST00000434407 VAX1Q5SQQ9 334 aa14.42□□□□□ -0.1
HLA-F-220ENST00000434407 PYHIN1Q6K0P9 492 aa14.42□□□□□ -0.1
HLA-F-220ENST00000434407 ZNF562Q6V9R5 426 aa14.42□□□□□ -0.1
HLA-F-220ENST00000434407 RNF152Q8N8N0 203 aa14.42□□□□□ -0.1
HLA-F-220ENST00000434407 OSR1Q8TAX0 266 aaPredicted RBP14.42□□□□□ -0.1
HLA-F-220ENST00000434407 MMP27Q9H306 513 aa14.42□□□□□ -0.1
HLA-F-220ENST00000434407 TCRBV4S1A1TA0A5B7 111 aa14.41□□□□□ -0.1
HLA-F-220ENST00000434407 SHOXO15266 292 aa14.41□□□□□ -0.1
HLA-F-220ENST00000434407 ATP6V0E1O15342 81 aa14.41□□□□□ -0.1
HLA-F-220ENST00000434407 FCGR3BO75015 233 aa14.41□□□□□ -0.1
HLA-F-220ENST00000434407 IGHG4P01861 327 aa14.41□□□□□ -0.1
HLA-F-220ENST00000434407 EGR2P11161 476 aaPredicted RBP14.41□□□□□ -0.1
HLA-F-220ENST00000434407 PPIFP30405 207 aaKnown RBP14.41□□□□□ -0.1
HLA-F-220ENST00000434407 TNFSF8P32971 234 aa14.41□□□□□ -0.1
HLA-F-220ENST00000434407 HERV-K104P61576 105 aa14.41□□□□□ -0.1
HLA-F-220ENST00000434407 SSBP2P81877 361 aaPredicted RBP14.41□□□□□ -0.1
HLA-F-220ENST00000434407 DGCR2P98153 550 aa14.41□□□□□ -0.1
HLA-F-220ENST00000434407 PLGLAQ15195 96 aa14.41□□□□□ -0.1
HLA-F-220ENST00000434407 MRGPRG-AS1Q2M3A8 158 aa14.41□□□□□ -0.1
HLA-F-220ENST00000434407 TEX38Q6PEX7 206 aa14.41□□□□□ -0.1
HLA-F-220ENST00000434407 ZNF818PQ6ZRF7 136 aa14.41□□□□□ -0.1
HLA-F-220ENST00000434407 TMEM17Q86X19 198 aa14.41□□□□□ -0.1
HLA-F-220ENST00000434407 OR6F1Q8NGZ6 308 aa14.41□□□□□ -0.1
HLA-F-220ENST00000434407 SMIM4Q8WVI0 70 aa14.41□□□□□ -0.1
HLA-F-220ENST00000434407 FCAMRQ8WWV6 532 aa14.41□□□□□ -0.1
HLA-F-220ENST00000434407 TPSG1Q9NRR2 321 aa14.41□□□□□ -0.1
HLA-F-220ENST00000434407 TAS2R8Q9NYW2 309 aa14.41□□□□□ -0.1
HLA-F-220ENST00000434407 FBXO7Q9Y3I1 522 aa14.41□□□□□ -0.1
HLA-F-220ENST00000434407 ELANEP08246 267 aa14.4□□□□□ -0.1
HLA-F-220ENST00000434407 TBPP20226 339 aa14.4□□□□□ -0.1
HLA-F-220ENST00000434407 UBE2KP61086 200 aa14.4□□□□□ -0.1
HLA-F-220ENST00000434407 FOXE3Q13461 319 aa14.4□□□□□ -0.1
HLA-F-220ENST00000434407 NSUN5P1Q3KNT7 163 aa14.4□□□□□ -0.1
HLA-F-220ENST00000434407 PPP1R27Q86WC6 154 aa14.4□□□□□ -0.1
HLA-F-220ENST00000434407 TEX45Q8NA69 505 aa14.4□□□□□ -0.1
HLA-F-220ENST00000434407 MINDY2Q8NBR6 621 aa14.4□□□□□ -0.1
HLA-F-220ENST00000434407 TCTEX1D2Q8WW35 142 aa14.4□□□□□ -0.1
HLA-F-220ENST00000434407 BORCS5Q969J3 196 aa14.4□□□□□ -0.1
HLA-F-220ENST00000434407 GPHA2Q96T91 129 aa14.4□□□□□ -0.1
HLA-F-220ENST00000434407 TSC22D3Q99576 134 aa14.4□□□□□ -0.1
HLA-F-220ENST00000434407 FXYD6Q9H0Q3 95 aa14.4□□□□□ -0.1
HLA-F-220ENST00000434407 NUBP2Q9Y5Y2 271 aa14.4□□□□□ -0.1
HLA-F-220ENST00000434407 RBFOX2O43251 390 aaKnown RBP eCLIP14.39□□□□□ -0.11
HLA-F-220ENST00000434407 CA2P00918 260 aa14.39□□□□□ -0.11
HLA-F-220ENST00000434407 CD74P04233 296 aa14.39□□□□□ -0.11
HLA-F-220ENST00000434407 VDAC1P21796 283 aa14.39□□□□□ -0.11
HLA-F-220ENST00000434407 KIR2DS2P43631 304 aa14.39□□□□□ -0.11
HLA-F-220ENST00000434407 RNASE12Q5GAN4 147 aaKnown RBP14.39□□□□□ -0.11
HLA-F-220ENST00000434407 TMEM229BQ8NBD8 167 aa14.39□□□□□ -0.11
HLA-F-220ENST00000434407 OR4S2Q8NH73 311 aa14.39□□□□□ -0.11
HLA-F-220ENST00000434407 PARP11Q9NR21 331 aa14.39□□□□□ -0.11
HLA-F-220ENST00000434407 ZFP57Q9NU63 452 aa14.39□□□□□ -0.11
HLA-F-220ENST00000434407 G3V318 75 aa14.38□□□□□ -0.11
HLA-F-220ENST00000434407 M0QYG6 137 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms