RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 IGKV1D-13A0A0B4J2D9 117 aa7.65□□□□□ -1.18
HDAC6-207ENST00000430858 SRRM4A7MD48 611 aaKnown RBP7.65□□□□□ -1.18
HDAC6-207ENST00000430858 LINC00473A8K010 186 aa7.65□□□□□ -1.18
HDAC6-207ENST00000430858 GABARAPO95166 117 aa7.65□□□□□ -1.18
HDAC6-207ENST00000430858 CRYZL1O95825 349 aa7.65□□□□□ -1.18
HDAC6-207ENST00000430858 IGLV2-14P01704 120 aa7.65□□□□□ -1.18
HDAC6-207ENST00000430858 CRYGBP07316 175 aa7.65□□□□□ -1.18
HDAC6-207ENST00000430858 IGKV1-13P0DP09 117 aa7.65□□□□□ -1.18
HDAC6-207ENST00000430858 PTHLHP12272 177 aa7.65□□□□□ -1.18
HDAC6-207ENST00000430858 CD40LGP29965 261 aa7.65□□□□□ -1.18
HDAC6-207ENST00000430858 FCGR2CP31995 323 aa7.65□□□□□ -1.18
HDAC6-207ENST00000430858 RORCP51449 518 aa7.65□□□□□ -1.18
HDAC6-207ENST00000430858 TAS2R20P59543 309 aa7.65□□□□□ -1.18
HDAC6-207ENST00000430858 UBE2KP61086 200 aa7.65□□□□□ -1.18
HDAC6-207ENST00000430858 RUNX1Q01196 453 aa7.65□□□□□ -1.18
HDAC6-207ENST00000430858 KIAA0141Q14154 515 aaPredicted RBP7.65□□□□□ -1.18
HDAC6-207ENST00000430858 FXYD3Q14802 87 aa7.65□□□□□ -1.18
HDAC6-207ENST00000430858 MSMO1Q15800 293 aa7.65□□□□□ -1.18
HDAC6-207ENST00000430858 VMA21Q3ZAQ7 101 aa7.65□□□□□ -1.18
HDAC6-207ENST00000430858 ACTBL2Q562R1 376 aa7.65□□□□□ -1.18
HDAC6-207ENST00000430858 UNQ5815/PRO19632Q6UWF5 114 aa7.65□□□□□ -1.18
HDAC6-207ENST00000430858 KCTD9Q7L273 389 aa7.65□□□□□ -1.18
HDAC6-207ENST00000430858 OVCH2Q7RTZ1 564 aa7.65□□□□□ -1.18
HDAC6-207ENST00000430858 TEX45Q8NA69 505 aa7.65□□□□□ -1.18
HDAC6-207ENST00000430858 OR5AP2Q8NGF4 316 aa7.65□□□□□ -1.18
HDAC6-207ENST00000430858 OR5M8Q8NGP6 311 aa7.65□□□□□ -1.18
HDAC6-207ENST00000430858 ACOT12Q8WYK0 555 aa7.65□□□□□ -1.18
HDAC6-207ENST00000430858 ARPC1AQ92747 370 aa7.65□□□□□ -1.18
HDAC6-207ENST00000430858 TMEM68Q96MH6 324 aa7.65□□□□□ -1.18
HDAC6-207ENST00000430858 DUX3Q96PT4 197 aa7.65□□□□□ -1.18
HDAC6-207ENST00000430858 HSD17B10Q99714 261 aaKnown RBP7.65□□□□□ -1.18
HDAC6-207ENST00000430858 FAM103A1Q9BTL3 118 aaKnown RBP7.65□□□□□ -1.18
HDAC6-207ENST00000430858 MRPS26Q9BYN8 205 aaKnown RBP7.65□□□□□ -1.18
HDAC6-207ENST00000430858 IFT46Q9NQC8 304 aa7.65□□□□□ -1.18
HDAC6-207ENST00000430858 TPSG1Q9NRR2 321 aa7.65□□□□□ -1.18
HDAC6-207ENST00000430858 VSIG4Q9Y279 399 aa7.65□□□□□ -1.18
HDAC6-207ENST00000430858 MRPS7Q9Y2R9 242 aaKnown RBP7.65□□□□□ -1.18
HDAC6-207ENST00000430858 A3GALT2U3KPV4 340 aa7.65□□□□□ -1.18
HDAC6-207ENST00000430858 SMIM31A0A1B0GVY4 71 aa7.64□□□□□ -1.19
HDAC6-207ENST00000430858 ARPC1BO15143 372 aaKnown RBP7.64□□□□□ -1.19
HDAC6-207ENST00000430858 SOX15O60248 233 aa7.64□□□□□ -1.19
HDAC6-207ENST00000430858 FCGR3BO75015 233 aa7.64□□□□□ -1.19
HDAC6-207ENST00000430858 CNIH1O95406 144 aa7.64□□□□□ -1.19
HDAC6-207ENST00000430858 PPYP01298 95 aa7.64□□□□□ -1.19
HDAC6-207ENST00000430858 APOA1P02647 267 aa7.64□□□□□ -1.19
HDAC6-207ENST00000430858 AADACP22760 399 aa7.64□□□□□ -1.19
HDAC6-207ENST00000430858 GNB1P62873 340 aa7.64□□□□□ -1.19
HDAC6-207ENST00000430858 FHL3Q13643 280 aa7.64□□□□□ -1.19
HDAC6-207ENST00000430858 CDK10Q15131 360 aa7.64□□□□□ -1.19
HDAC6-207ENST00000430858 CTF1Q16619 201 aa7.64□□□□□ -1.19
HDAC6-207ENST00000430858 DEFB136Q30KP8 78 aa7.64□□□□□ -1.19
HDAC6-207ENST00000430858 ZNF66Q6ZN08 573 aa7.64□□□□□ -1.19
HDAC6-207ENST00000430858 ZBTB34Q8NCN2 500 aa7.64□□□□□ -1.19
HDAC6-207ENST00000430858 LFNGQ8NES3 379 aa7.64□□□□□ -1.19
HDAC6-207ENST00000430858 OR11H1Q8NG94 326 aa7.64□□□□□ -1.19
HDAC6-207ENST00000430858 GRPEL2Q8TAA5 225 aa7.64□□□□□ -1.19
HDAC6-207ENST00000430858 GIMAP1Q8WWP7 306 aa7.64□□□□□ -1.19
HDAC6-207ENST00000430858 AP3S1Q92572 193 aa7.64□□□□□ -1.19
HDAC6-207ENST00000430858 DPF1Q92782 380 aa7.64□□□□□ -1.19
HDAC6-207ENST00000430858 SNAPC3Q92966 411 aa7.64□□□□□ -1.19
HDAC6-207ENST00000430858 DCUN1D5Q9BTE7 237 aa7.64□□□□□ -1.19
HDAC6-207ENST00000430858 SLA2Q9H6Q3 261 aa7.64□□□□□ -1.19
HDAC6-207ENST00000430858 COMMD3Q9UBI1 195 aa7.64□□□□□ -1.19
HDAC6-207ENST00000430858 ANAPC10Q9UM13 185 aa7.64□□□□□ -1.19
HDAC6-207ENST00000430858 NOTCH3Q9UM47 2321 aa7.64□□□□□ -1.19
HDAC6-207ENST00000430858 MEGF8Q7Z7M0 2845 aa7.63□□□□□ -1.19
HDAC6-207ENST00000430858 MEIS3P1A6NDR6 274 aa7.63□□□□□ -1.19
HDAC6-207ENST00000430858 H3BUA1 57 aa7.63□□□□□ -1.19
HDAC6-207ENST00000430858 I3L521 148 aa7.63□□□□□ -1.19
HDAC6-207ENST00000430858 CREBL2O60519 120 aaPredicted RBP7.63□□□□□ -1.19
HDAC6-207ENST00000430858 PRB2P02812 416 aaPredicted RBP7.63□□□□□ -1.19
HDAC6-207ENST00000430858 EIF4EP06730 217 aaKnown RBP7.63□□□□□ -1.19
HDAC6-207ENST00000430858 FCER2P06734 321 aa7.63□□□□□ -1.19
HDAC6-207ENST00000430858 OR8U8P0C7N1 319 aa7.63□□□□□ -1.19
HDAC6-207ENST00000430858 NAT1P18440 290 aa7.63□□□□□ -1.19
HDAC6-207ENST00000430858 PRSS3P35030 304 aa7.63□□□□□ -1.19
HDAC6-207ENST00000430858 ALDH3B2P48448 385 aa7.63□□□□□ -1.19
HDAC6-207ENST00000430858 RAB25P57735 213 aa7.63□□□□□ -1.19
HDAC6-207ENST00000430858 RPL30P62888 115 aaKnown RBP7.63□□□□□ -1.19
HDAC6-207ENST00000430858 SSBP2P81877 361 aaPredicted RBP7.63□□□□□ -1.19
HDAC6-207ENST00000430858 ZNF616Q08AN1 781 aa7.63□□□□□ -1.19
HDAC6-207ENST00000430858 PJVKQ0ZLH3 352 aa7.63□□□□□ -1.19
HDAC6-207ENST00000430858 EIF4EBP1Q13541 118 aaPredicted RBP7.63□□□□□ -1.19
HDAC6-207ENST00000430858 GPR107Q5VW38 600 aa7.63□□□□□ -1.19
HDAC6-207ENST00000430858 MZT2AQ6P582 158 aa7.63□□□□□ -1.19
HDAC6-207ENST00000430858 GPR141Q7Z602 305 aa7.63□□□□□ -1.19
HDAC6-207ENST00000430858 MFSD4AQ8N468 514 aa7.63□□□□□ -1.19
HDAC6-207ENST00000430858 OR4S2Q8NH73 311 aa7.63□□□□□ -1.19
HDAC6-207ENST00000430858 SECTM1Q8WVN6 248 aa7.63□□□□□ -1.19
HDAC6-207ENST00000430858 TCTEX1D2Q8WW35 142 aa7.63□□□□□ -1.19
HDAC6-207ENST00000430858 NAA50Q9GZZ1 169 aaKnown RBP7.63□□□□□ -1.19
HDAC6-207ENST00000430858 GNB4Q9HAV0 340 aa7.63□□□□□ -1.19
HDAC6-207ENST00000430858 CCL28Q9NRJ3 127 aa7.63□□□□□ -1.19
HDAC6-207ENST00000430858 AURKAIP1Q9NWT8 199 aaPredicted RBP7.63□□□□□ -1.19
HDAC6-207ENST00000430858 NOTCH1P46531 2555 aa7.62□□□□□ -1.19
HDAC6-207ENST00000430858 LGALS1P09382 135 aaKnown RBP7.62□□□□□ -1.19
HDAC6-207ENST00000430858 SAA1P0DJI8 122 aaPredicted RBP7.62□□□□□ -1.19
HDAC6-207ENST00000430858 ZNF182P17025 639 aaPredicted RBP7.62□□□□□ -1.19
HDAC6-207ENST00000430858 KIR2DS2P43631 304 aa7.62□□□□□ -1.19
HDAC6-207ENST00000430858 TPPP2P59282 170 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms