RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 LINC00299Q6ZSB3 139 aa13.36□□□□□ -0.27
UBE3D-204ENST00000430071 TMEM17Q86X19 198 aa13.36□□□□□ -0.27
UBE3D-204ENST00000430071 Q8N6K4 173 aa13.36□□□□□ -0.27
UBE3D-204ENST00000430071 ZNF383Q8NA42 475 aa13.36□□□□□ -0.27
UBE3D-204ENST00000430071 OR4F17Q8NGA8 305 aa13.36□□□□□ -0.27
UBE3D-204ENST00000430071 OR6F1Q8NGZ6 308 aa13.36□□□□□ -0.27
UBE3D-204ENST00000430071 MOB3AQ96BX8 217 aa13.36□□□□□ -0.27
UBE3D-204ENST00000430071 OR4F4Q96R69 305 aa13.36□□□□□ -0.27
UBE3D-204ENST00000430071 SDHCQ99643 169 aaPredicted RBP13.36□□□□□ -0.27
UBE3D-204ENST00000430071 SLC5A7Q9GZV3 580 aa13.36□□□□□ -0.27
UBE3D-204ENST00000430071 FXYD6Q9H0Q3 95 aa13.36□□□□□ -0.27
UBE3D-204ENST00000430071 CCL28Q9NRJ3 127 aa13.36□□□□□ -0.27
UBE3D-204ENST00000430071 H0YJW9 148 aa13.35□□□□□ -0.27
UBE3D-204ENST00000430071 ZNF735P0CB33 412 aa13.35□□□□□ -0.27
UBE3D-204ENST00000430071 HERV-K104P61576 105 aa13.35□□□□□ -0.27
UBE3D-204ENST00000430071 TSPAN5P62079 268 aa13.35□□□□□ -0.27
UBE3D-204ENST00000430071 OR5AN1Q8NGI8 311 aa13.35□□□□□ -0.27
UBE3D-204ENST00000430071 OR4C16Q8NGL9 310 aa13.35□□□□□ -0.27
UBE3D-204ENST00000430071 TAS2R8Q9NYW2 309 aa13.35□□□□□ -0.27
UBE3D-204ENST00000430071 OR5H14A6NHG9 310 aa13.34□□□□□ -0.27
UBE3D-204ENST00000430071 M0QZK8 103 aa13.34□□□□□ -0.27
UBE3D-204ENST00000430071 SLC22A5O76082 557 aa13.34□□□□□ -0.27
UBE3D-204ENST00000430071 IFNA6P05013 189 aa13.34□□□□□ -0.27
UBE3D-204ENST00000430071 AKAIN1P0CW23 69 aa13.34□□□□□ -0.27
UBE3D-204ENST00000430071 IGLL1P15814 213 aa13.34□□□□□ -0.27
UBE3D-204ENST00000430071 ZNF45Q02386 682 aa13.34□□□□□ -0.27
UBE3D-204ENST00000430071 EIF4EBP1Q13541 118 aaPredicted RBP13.34□□□□□ -0.27
UBE3D-204ENST00000430071 KLF9Q13886 244 aaPredicted RBP13.34□□□□□ -0.27
UBE3D-204ENST00000430071 BAK1Q16611 211 aa13.34□□□□□ -0.27
UBE3D-204ENST00000430071 AADACL3Q5VUY0 350 aa13.34□□□□□ -0.27
UBE3D-204ENST00000430071 ARRDC1Q8N5I2 433 aa13.34□□□□□ -0.27
UBE3D-204ENST00000430071 GDPD1Q8N9F7 314 aa13.34□□□□□ -0.27
UBE3D-204ENST00000430071 Q8N9W7 124 aa13.34□□□□□ -0.27
UBE3D-204ENST00000430071 GPHA2Q96T91 129 aa13.34□□□□□ -0.27
UBE3D-204ENST00000430071 PLSCR3Q9NRY6 295 aa13.34□□□□□ -0.27
UBE3D-204ENST00000430071 TSSC4Q9Y5U2 329 aaPredicted RBP13.34□□□□□ -0.27
UBE3D-204ENST00000430071 PSMB11A5LHX3 300 aa13.33□□□□□ -0.27
UBE3D-204ENST00000430071 LINC00473A8K010 186 aa13.33□□□□□ -0.27
UBE3D-204ENST00000430071 MOSP00540 346 aa13.33□□□□□ -0.27
UBE3D-204ENST00000430071 GNRHRP30968 328 aa13.33□□□□□ -0.27
UBE3D-204ENST00000430071 DUTP33316 252 aaKnown RBP13.33□□□□□ -0.27
UBE3D-204ENST00000430071 F2RL1P55085 397 aa13.33□□□□□ -0.27
UBE3D-204ENST00000430071 RPL30P62888 115 aaKnown RBP13.33□□□□□ -0.27
UBE3D-204ENST00000430071 KHDC1LQ5JSQ8 128 aa13.33□□□□□ -0.27
UBE3D-204ENST00000430071 ZNF818PQ6ZRF7 136 aa13.33□□□□□ -0.27
UBE3D-204ENST00000430071 LHFPL1Q86WI0 220 aa13.33□□□□□ -0.27
UBE3D-204ENST00000430071 OR2T10Q8NGZ9 312 aa13.33□□□□□ -0.27
UBE3D-204ENST00000430071 RITA1Q96K30 269 aa13.33□□□□□ -0.27
UBE3D-204ENST00000430071 FGF16O43320 207 aa13.32□□□□□ -0.28
UBE3D-204ENST00000430071 IGHG2P01859 326 aa13.32□□□□□ -0.28
UBE3D-204ENST00000430071 THBS3P49746 956 aa13.32□□□□□ -0.28
UBE3D-204ENST00000430071 MEF2DQ14814 521 aa13.32□□□□□ -0.28
UBE3D-204ENST00000430071 MSMO1Q15800 293 aa13.32□□□□□ -0.28
UBE3D-204ENST00000430071 ETV3LQ6ZN32 361 aa13.32□□□□□ -0.28
UBE3D-204ENST00000430071 LCNL1Q6ZST4 164 aa13.32□□□□□ -0.28
UBE3D-204ENST00000430071 WFDC9Q8NEX5 89 aa13.32□□□□□ -0.28
UBE3D-204ENST00000430071 OR4X2Q8NGF9 303 aa13.32□□□□□ -0.28
UBE3D-204ENST00000430071 DDB2Q92466 427 aa13.32□□□□□ -0.28
UBE3D-204ENST00000430071 NCBP2LA6PVI3 153 aaKnown RBP13.32□□□□□ -0.28
UBE3D-204ENST00000430071 H7C2Y5 167 aa13.32□□□□□ -0.28
UBE3D-204ENST00000430071 TNFSF12O43508 249 aa13.32□□□□□ -0.28
UBE3D-204ENST00000430071 PF4V1P10720 104 aa13.32□□□□□ -0.28
UBE3D-204ENST00000430071 MC5RP33032 325 aa13.32□□□□□ -0.28
UBE3D-204ENST00000430071 SLC35E3Q7Z769 313 aa13.32□□□□□ -0.28
UBE3D-204ENST00000430071 TOMM5Q8N4H5 51 aa13.32□□□□□ -0.28
UBE3D-204ENST00000430071 MRGPRFQ96AM1 343 aa13.32□□□□□ -0.28
UBE3D-204ENST00000430071 SLC35D1Q9NTN3 355 aa13.32□□□□□ -0.28
UBE3D-204ENST00000430071 WASHC3Q9Y3C0 194 aa13.32□□□□□ -0.28
UBE3D-204ENST00000430071 APOA2P02652 100 aa13.31□□□□□ -0.28
UBE3D-204ENST00000430071 IGKV1-16P04430 117 aa13.31□□□□□ -0.28
UBE3D-204ENST00000430071 CD33P20138 364 aa13.31□□□□□ -0.28
UBE3D-204ENST00000430071 CNTFRP26992 372 aa13.31□□□□□ -0.28
UBE3D-204ENST00000430071 UCP3P55916 312 aa13.31□□□□□ -0.28
UBE3D-204ENST00000430071 SCGB2B2Q4G0G5 96 aa13.31□□□□□ -0.28
UBE3D-204ENST00000430071 KCTD9Q7L273 389 aa13.31□□□□□ -0.28
UBE3D-204ENST00000430071 BVESQ8NE79 360 aa13.31□□□□□ -0.28
UBE3D-204ENST00000430071 TERB2Q8NHR7 220 aa13.31□□□□□ -0.28
UBE3D-204ENST00000430071 ADTRPQ96IZ2 230 aa13.31□□□□□ -0.28
UBE3D-204ENST00000430071 HSPB9Q9BQS6 159 aa13.31□□□□□ -0.28
UBE3D-204ENST00000430071 HRASLSQ9HDD0 168 aa13.31□□□□□ -0.28
UBE3D-204ENST00000430071 DISC1C4P0D8 188 aa13.3□□□□□ -0.28
UBE3D-204ENST00000430071 IL7P13232 177 aa13.3□□□□□ -0.28
UBE3D-204ENST00000430071 PPP5CP53041 499 aa13.3□□□□□ -0.28
UBE3D-204ENST00000430071 BRWD1-AS2P59051 145 aa13.3□□□□□ -0.28
UBE3D-204ENST00000430071 AP3S2P59780 193 aa13.3□□□□□ -0.28
UBE3D-204ENST00000430071 OR2B11Q5JQS5 317 aa13.3□□□□□ -0.28
UBE3D-204ENST00000430071 TRIQKQ629K1 86 aa13.3□□□□□ -0.28
UBE3D-204ENST00000430071 STPG2Q8N412 459 aa13.3□□□□□ -0.28
UBE3D-204ENST00000430071 ZBTB34Q8NCN2 500 aa13.3□□□□□ -0.28
UBE3D-204ENST00000430071 OR51S1Q8NGJ8 323 aa13.3□□□□□ -0.28
UBE3D-204ENST00000430071 S100ZQ8WXG8 99 aa13.3□□□□□ -0.28
UBE3D-204ENST00000430071 HSD17B10Q99714 261 aaKnown RBP13.3□□□□□ -0.28
UBE3D-204ENST00000430071 RSRP1Q9BUV0 290 aa13.3□□□□□ -0.28
UBE3D-204ENST00000430071 AURKAIP1Q9NWT8 199 aaPredicted RBP13.3□□□□□ -0.28
UBE3D-204ENST00000430071 COL7A1Q02388 2944 aa13.29□□□□□ -0.28
UBE3D-204ENST00000430071 PF4P02776 101 aa13.29□□□□□ -0.28
UBE3D-204ENST00000430071 RPL23AP62750 156 aaKnown RBP13.29□□□□□ -0.28
UBE3D-204ENST00000430071 TAGLNQ01995 201 aaKnown RBP13.29□□□□□ -0.28
UBE3D-204ENST00000430071 PHLDA2Q53GA4 152 aa13.29□□□□□ -0.28
UBE3D-204ENST00000430071 ZNF57Q68EA5 555 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms