RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 RUSC1-AS1Q66K80 236 aa7.18□□□□□ -1.26
SMC6-204ENST00000428868 GSG1LQ6UXU4 331 aa7.18□□□□□ -1.26
SMC6-204ENST00000428868 VKORC1L1Q8N0U8 176 aa7.18□□□□□ -1.26
SMC6-204ENST00000428868 ZBTB8BQ8NAP8 495 aaPredicted RBP7.18□□□□□ -1.26
SMC6-204ENST00000428868 OR13D1Q8NGV5 346 aa7.18□□□□□ -1.26
SMC6-204ENST00000428868 OR2T35Q8NGX2 323 aa7.18□□□□□ -1.26
SMC6-204ENST00000428868 S1PR3Q99500 378 aa7.18□□□□□ -1.26
SMC6-204ENST00000428868 PDCD10Q9BUL8 212 aa7.18□□□□□ -1.26
SMC6-204ENST00000428868 UNKLQ9H9P5 680 aaKnown RBP7.18□□□□□ -1.26
SMC6-204ENST00000428868 SOX21Q9Y651 276 aaPredicted RBP7.18□□□□□ -1.26
SMC6-204ENST00000428868 FLNAP21333 2647 aaKnown RBP7.17□□□□□ -1.26
SMC6-204ENST00000428868 TRAV3A0A0B4J244 114 aa7.17□□□□□ -1.26
SMC6-204ENST00000428868 hCG_1809904A0A1W2PP81 198 aa7.17□□□□□ -1.26
SMC6-204ENST00000428868 A0A1W2PPE2 198 aa7.17□□□□□ -1.26
SMC6-204ENST00000428868 A0A1W2PPI3 338 aa7.17□□□□□ -1.26
SMC6-204ENST00000428868 A0A1W2PR64 198 aa7.17□□□□□ -1.26
SMC6-204ENST00000428868 A0A1W2PRV1 198 aa7.17□□□□□ -1.26
SMC6-204ENST00000428868 KCNAB3O43448 404 aa7.17□□□□□ -1.26
SMC6-204ENST00000428868 CRYZL1O95825 349 aa7.17□□□□□ -1.26
SMC6-204ENST00000428868 C1QBP02746 253 aa7.17□□□□□ -1.26
SMC6-204ENST00000428868 IGKV1-16P04430 117 aa7.17□□□□□ -1.26
SMC6-204ENST00000428868 OR9G9P0C7N8 305 aa7.17□□□□□ -1.26
SMC6-204ENST00000428868 IGHV4-38-2P0DP08 117 aa7.17□□□□□ -1.26
SMC6-204ENST00000428868 EIF2B2P49770 351 aaKnown RBP7.17□□□□□ -1.26
SMC6-204ENST00000428868 RAP2BP61225 183 aa7.17□□□□□ -1.26
SMC6-204ENST00000428868 LOXL1Q08397 574 aaPredicted RBP7.17□□□□□ -1.26
SMC6-204ENST00000428868 RAB32Q13637 225 aa7.17□□□□□ -1.26
SMC6-204ENST00000428868 TPTE2P1Q5T6R2 138 aa7.17□□□□□ -1.26
SMC6-204ENST00000428868 C1orf122Q6ZSJ8 110 aa7.17□□□□□ -1.26
SMC6-204ENST00000428868 SSX9Q7RTT3 188 aa7.17□□□□□ -1.26
SMC6-204ENST00000428868 TGIF2LXQ8IUE1 241 aa7.17□□□□□ -1.26
SMC6-204ENST00000428868 PPP1R1CQ8WVI7 109 aa7.17□□□□□ -1.26
SMC6-204ENST00000428868 IL22RA2Q969J5 263 aa7.17□□□□□ -1.26
SMC6-204ENST00000428868 TMEM186Q96B77 213 aa7.17□□□□□ -1.26
SMC6-204ENST00000428868 R3HDM4Q96D70 268 aa7.17□□□□□ -1.26
SMC6-204ENST00000428868 RITA1Q96K30 269 aa7.17□□□□□ -1.26
SMC6-204ENST00000428868 C2orf50Q96LR7 162 aa7.17□□□□□ -1.26
SMC6-204ENST00000428868 RANBP3Q9H6Z4 567 aaPredicted RBP7.17□□□□□ -1.26
SMC6-204ENST00000428868 SLC35D1Q9NTN3 355 aa7.17□□□□□ -1.26
SMC6-204ENST00000428868 HIF1ANQ9NWT6 349 aa7.17□□□□□ -1.26
SMC6-204ENST00000428868 OR5AC2Q9NZP5 309 aa7.17□□□□□ -1.26
SMC6-204ENST00000428868 GSKIPQ9P0R6 139 aa7.17□□□□□ -1.26
SMC6-204ENST00000428868 NAV3Q8IVL0 2385 aa7.17□□□□□ -1.26
SMC6-204ENST00000428868 TRAV40A0A0B4J280 105 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 IGHV1-3A0A0C4DH29 117 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 CENPVL3A0A0U1RRI6 287 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 SRRM4A7MD48 611 aaKnown RBP7.16□□□□□ -1.26
SMC6-204ENST00000428868 B3GALNT1O75752 331 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 SCGB1D2O95969 90 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 KRASP01116 189 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 MYOD1P15172 320 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 VDAC1P21796 283 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 CD24P25063 80 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 IL3RAP26951 378 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 CNTFRP26992 372 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 GZMKP49863 264 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 AKR1C2P52895 323 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 PRRX1P54821 245 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 SRPXP78539 464 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 TAGLNQ01995 201 aaKnown RBP7.16□□□□□ -1.26
SMC6-204ENST00000428868 TMEM249Q2WGJ8 235 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 KRTAP21-3Q3LHN1 58 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 ZFP69Q49AA0 526 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 MIDNQ504T8 468 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 LAMTOR1Q6IAA8 161 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 FAM71F2Q6NXP2 309 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 PRSS57Q6UWY2 283 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 NOXA1Q86UR1 476 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 FOXRED2Q8IWF2 684 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 PIP4P2Q8N4L2 257 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 LINC01356Q8N9X3 169 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 OR5AN1Q8NGI8 311 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 OR4D5Q8NGN0 318 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 NMES1Q9C002 83 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 HEXA-AS1Q9H8Q6 139 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 PLSCR3Q9NRY6 295 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 MBD2Q9UBB5 411 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 CACNG5Q9UF02 275 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 NSG2Q9Y328 171 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 BOLA1Q9Y3E2 137 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 TMED3Q9Y3Q3 217 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 HILPDAQ9Y5L2 63 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 CSPG4Q6UVK1 2322 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 CCDC168Q8NDH2 2452 aa7.16□□□□□ -1.26
SMC6-204ENST00000428868 TRAV20A0A0B4J274 112 aa7.15□□□□□ -1.26
SMC6-204ENST00000428868 DUXBA0A1W2PPF3 345 aa7.15□□□□□ -1.26
SMC6-204ENST00000428868 MARCH11A6NNE9 402 aa7.15□□□□□ -1.26
SMC6-204ENST00000428868 B4DSR2 109 aa7.15□□□□□ -1.26
SMC6-204ENST00000428868 K7EPK0 472 aa7.15□□□□□ -1.26
SMC6-204ENST00000428868 TIMM23O14925 209 aa7.15□□□□□ -1.26
SMC6-204ENST00000428868 SMAD7O15105 426 aaKnown RBP7.15□□□□□ -1.26
SMC6-204ENST00000428868 RBFOX2O43251 390 aaKnown RBP eCLIP7.15□□□□□ -1.26
SMC6-204ENST00000428868 PITX3O75364 302 aa7.15□□□□□ -1.26
SMC6-204ENST00000428868 MPC2O95563 127 aa7.15□□□□□ -1.26
SMC6-204ENST00000428868 HPRT1P00492 218 aa7.15□□□□□ -1.26
SMC6-204ENST00000428868 IFNA21P01568 189 aa7.15□□□□□ -1.26
SMC6-204ENST00000428868 MBPP02686 304 aaPredicted RBP7.15□□□□□ -1.26
SMC6-204ENST00000428868 HTR1DP28221 377 aa7.15□□□□□ -1.26
SMC6-204ENST00000428868 SAA4P35542 130 aa7.15□□□□□ -1.26
SMC6-204ENST00000428868 KIR2DS2P43631 304 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms