RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 C9orf139Q6ZV77 190 aa10.07□□□□□ -0.8
TRIM39-207ENST00000428404 SELENOHQ8IZQ5 122 aaKnown RBP10.07□□□□□ -0.8
TRIM39-207ENST00000428404 LGI3Q8N145 548 aa10.07□□□□□ -0.8
TRIM39-207ENST00000428404 COQ8AQ8NI60 647 aa10.07□□□□□ -0.8
TRIM39-207ENST00000428404 NANPQ8TBE9 248 aa10.07□□□□□ -0.8
TRIM39-207ENST00000428404 CFHR4Q92496 578 aa10.07□□□□□ -0.8
TRIM39-207ENST00000428404 MEGF9Q9H1U4 602 aa10.07□□□□□ -0.8
TRIM39-207ENST00000428404 PLEKHA2Q9HB19 425 aa10.07□□□□□ -0.8
TRIM39-207ENST00000428404 HILPDAQ9Y5L2 63 aa10.07□□□□□ -0.8
TRIM39-207ENST00000428404 ANK3Q12955 4377 aaKnown RBP10.06□□□□□ -0.8
TRIM39-207ENST00000428404 NAV3Q8IVL0 2385 aa10.06□□□□□ -0.8
TRIM39-207ENST00000428404 hCG_2014768A0A024R1R8 64 aa10.06□□□□□ -0.8
TRIM39-207ENST00000428404 TIMM23O14925 209 aa10.06□□□□□ -0.8
TRIM39-207ENST00000428404 HPRT1P00492 218 aa10.06□□□□□ -0.8
TRIM39-207ENST00000428404 SULT1A3P0DMM9 295 aa10.06□□□□□ -0.8
TRIM39-207ENST00000428404 SULT1A4P0DMN0 295 aa10.06□□□□□ -0.8
TRIM39-207ENST00000428404 PAX6P26367 422 aa10.06□□□□□ -0.8
TRIM39-207ENST00000428404 CD1BP29016 333 aa10.06□□□□□ -0.8
TRIM39-207ENST00000428404 BCAP31P51572 246 aa10.06□□□□□ -0.8
TRIM39-207ENST00000428404 RRAS2P62070 204 aaPredicted RBP10.06□□□□□ -0.8
TRIM39-207ENST00000428404 RTL8BQ17RB0 113 aa10.06□□□□□ -0.8
TRIM39-207ENST00000428404 OR2B11Q5JQS5 317 aa10.06□□□□□ -0.8
TRIM39-207ENST00000428404 LIN54Q6MZP7 749 aa10.06□□□□□ -0.8
TRIM39-207ENST00000428404 LYZL2Q7Z4W2 148 aa10.06□□□□□ -0.8
TRIM39-207ENST00000428404 MOB3BQ86TA1 216 aa10.06□□□□□ -0.8
TRIM39-207ENST00000428404 OR4S2Q8NH73 311 aa10.06□□□□□ -0.8
TRIM39-207ENST00000428404 RBPMSQ93062 196 aaKnown RBP10.06□□□□□ -0.8
TRIM39-207ENST00000428404 MED28Q9H204 178 aa10.06□□□□□ -0.8
TRIM39-207ENST00000428404 SLC35D1Q9NTN3 355 aa10.06□□□□□ -0.8
TRIM39-207ENST00000428404 NUP50Q9UKX7 468 aa10.06□□□□□ -0.8
TRIM39-207ENST00000428404 WASHC3Q9Y3C0 194 aa10.06□□□□□ -0.8
TRIM39-207ENST00000428404 SOX21Q9Y651 276 aaPredicted RBP10.06□□□□□ -0.8
TRIM39-207ENST00000428404 SONP18583 2426 aaKnown RBP10.06□□□□□ -0.8
TRIM39-207ENST00000428404 PIGBOS1A0A0B4J2F0 54 aa10.05□□□□□ -0.8
TRIM39-207ENST00000428404 A0A0U1RQK1 487 aa10.05□□□□□ -0.8
TRIM39-207ENST00000428404 DUXBA0A1W2PPF3 345 aa10.05□□□□□ -0.8
TRIM39-207ENST00000428404 HMX3A6NHT5 357 aa10.05□□□□□ -0.8
TRIM39-207ENST00000428404 VGLL3A8MV65 326 aa10.05□□□□□ -0.8
TRIM39-207ENST00000428404 SSNA1O43805 119 aa10.05□□□□□ -0.8
TRIM39-207ENST00000428404 S1PR2O95136 353 aa10.05□□□□□ -0.8
TRIM39-207ENST00000428404 APOA2P02652 100 aa10.05□□□□□ -0.8
TRIM39-207ENST00000428404 IGKV1-16P04430 117 aa10.05□□□□□ -0.8
TRIM39-207ENST00000428404 P0C879 139 aa10.05□□□□□ -0.8
TRIM39-207ENST00000428404 RAB13P51153 203 aa10.05□□□□□ -0.8
TRIM39-207ENST00000428404 DYNLT3P51808 116 aa10.05□□□□□ -0.8
TRIM39-207ENST00000428404 EBI3Q14213 229 aa10.05□□□□□ -0.8
TRIM39-207ENST00000428404 FCN2Q15485 313 aa10.05□□□□□ -0.8
TRIM39-207ENST00000428404 TUSC1Q2TAM9 212 aa10.05□□□□□ -0.8
TRIM39-207ENST00000428404 TMEM177Q53S58 311 aa10.05□□□□□ -0.8
TRIM39-207ENST00000428404 TMEM268Q5VZI3 342 aa10.05□□□□□ -0.8
TRIM39-207ENST00000428404 PDPNQ86YL7 162 aa10.05□□□□□ -0.8
TRIM39-207ENST00000428404 TEX29Q8N6K0 151 aa10.05□□□□□ -0.8
TRIM39-207ENST00000428404 UXS1Q8NBZ7 420 aa10.05□□□□□ -0.8
TRIM39-207ENST00000428404 RBMXL1Q96E39 390 aaKnown RBP10.05□□□□□ -0.8
TRIM39-207ENST00000428404 SEC22AQ96IW7 307 aa10.05□□□□□ -0.8
TRIM39-207ENST00000428404 RAB18Q9NP72 206 aa10.05□□□□□ -0.8
TRIM39-207ENST00000428404 TMEM160Q9NX00 188 aa10.05□□□□□ -0.8
TRIM39-207ENST00000428404 COMMD9Q9P000 198 aa10.05□□□□□ -0.8
TRIM39-207ENST00000428404 IGHV3-72A0A0B4J1Y9 119 aa10.04□□□□□ -0.8
TRIM39-207ENST00000428404 SRRM4A7MD48 611 aaKnown RBP10.04□□□□□ -0.8
TRIM39-207ENST00000428404 ADAP1O75689 374 aa10.04□□□□□ -0.8
TRIM39-207ENST00000428404 VENTXO95231 258 aa10.04□□□□□ -0.8
TRIM39-207ENST00000428404 CRYZL1O95825 349 aa10.04□□□□□ -0.8
TRIM39-207ENST00000428404 LY6G6DO95868 133 aa10.04□□□□□ -0.8
TRIM39-207ENST00000428404 IGKV1-5P01602 117 aa10.04□□□□□ -0.8
TRIM39-207ENST00000428404 IL6RP08887 468 aaPredicted RBP10.04□□□□□ -0.8
TRIM39-207ENST00000428404 TRAPPC2P0DI81 140 aa10.04□□□□□ -0.8
TRIM39-207ENST00000428404 TRAPPC2BP0DI82 140 aa10.04□□□□□ -0.8
TRIM39-207ENST00000428404 CD99P14209 185 aa10.04□□□□□ -0.8
TRIM39-207ENST00000428404 CXCL3P19876 107 aa10.04□□□□□ -0.8
TRIM39-207ENST00000428404 POU2AF1Q16633 256 aa10.04□□□□□ -0.8
TRIM39-207ENST00000428404 NMSQ5H8A3 153 aa10.04□□□□□ -0.8
TRIM39-207ENST00000428404 FAM120AOSQ5T036 256 aa10.04□□□□□ -0.8
TRIM39-207ENST00000428404 THNSL2Q86YJ6 484 aa10.04□□□□□ -0.8
TRIM39-207ENST00000428404 ZNF695Q8IW36 515 aa10.04□□□□□ -0.8
TRIM39-207ENST00000428404 SLC35G3Q8N808 338 aa10.04□□□□□ -0.8
TRIM39-207ENST00000428404 OR11H7Q8NGC8 314 aa10.04□□□□□ -0.8
TRIM39-207ENST00000428404 OR4C13Q8NGP0 309 aa10.04□□□□□ -0.8
TRIM39-207ENST00000428404 OSR1Q8TAX0 266 aaPredicted RBP10.04□□□□□ -0.8
TRIM39-207ENST00000428404 LSM10Q969L4 123 aaKnown RBP10.04□□□□□ -0.8
TRIM39-207ENST00000428404 RITA1Q96K30 269 aa10.04□□□□□ -0.8
TRIM39-207ENST00000428404 RNF5Q99942 180 aa10.04□□□□□ -0.8
TRIM39-207ENST00000428404 YAE1D1Q9NRH1 226 aa10.04□□□□□ -0.8
TRIM39-207ENST00000428404 TMED3Q9Y3Q3 217 aa10.04□□□□□ -0.8
TRIM39-207ENST00000428404 H7C2Y5 167 aa10.03□□□□□ -0.8
TRIM39-207ENST00000428404 OR2A4O95047 310 aa10.03□□□□□ -0.8
TRIM39-207ENST00000428404 KRASP01116 189 aa10.03□□□□□ -0.8
TRIM39-207ENST00000428404 HOXB5P09067 269 aa10.03□□□□□ -0.8
TRIM39-207ENST00000428404 NQO2P16083 231 aa10.03□□□□□ -0.8
TRIM39-207ENST00000428404 VDAC1P21796 283 aa10.03□□□□□ -0.8
TRIM39-207ENST00000428404 SRSF4Q08170 494 aaKnown RBP10.03□□□□□ -0.8
TRIM39-207ENST00000428404 AANATQ16613 207 aa10.03□□□□□ -0.8
TRIM39-207ENST00000428404 GGNBP1Q5YKI7 109 aa10.03□□□□□ -0.8
TRIM39-207ENST00000428404 BCL6BQ8N143 479 aaPredicted RBP10.03□□□□□ -0.8
TRIM39-207ENST00000428404 Q8N6K4 173 aa10.03□□□□□ -0.8
TRIM39-207ENST00000428404 PIFOQ8TCI5 191 aa10.03□□□□□ -0.8
TRIM39-207ENST00000428404 FLYWCH2Q96CP2 140 aaKnown RBP10.03□□□□□ -0.8
TRIM39-207ENST00000428404 OR2A7Q96R45 310 aa10.03□□□□□ -0.8
TRIM39-207ENST00000428404 SMR3AQ99954 134 aa10.03□□□□□ -0.8
TRIM39-207ENST00000428404 PRDM13Q9H4Q3 707 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms