RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 HACD4Q5VWC8 232 aa14.22□□□□□ -0.13
PSPC1-202ENST00000427943 SORL1Q92673 2214 aa14.22□□□□□ -0.13
PSPC1-202ENST00000427943 TNCP24821 2201 aa14.21□□□□□ -0.13
PSPC1-202ENST00000427943 LOC100506127A0A0U1RQW1 187 aa14.21□□□□□ -0.13
PSPC1-202ENST00000427943 LINC00473A8K010 186 aa14.21□□□□□ -0.13
PSPC1-202ENST00000427943 LY86O95711 162 aa14.21□□□□□ -0.13
PSPC1-202ENST00000427943 CRYGBP07316 175 aa14.21□□□□□ -0.13
PSPC1-202ENST00000427943 CD40LGP29965 261 aa14.21□□□□□ -0.13
PSPC1-202ENST00000427943 DUTP33316 252 aaKnown RBP14.21□□□□□ -0.13
PSPC1-202ENST00000427943 NEDD8Q15843 81 aa14.21□□□□□ -0.13
PSPC1-202ENST00000427943 TMEM177Q53S58 311 aa14.21□□□□□ -0.13
PSPC1-202ENST00000427943 OR5T1Q8NG75 326 aa14.21□□□□□ -0.13
PSPC1-202ENST00000427943 ZNF355PQ9NSJ1 428 aa14.21□□□□□ -0.13
PSPC1-202ENST00000427943 ZNF256Q9Y2P7 627 aaPredicted RBP14.21□□□□□ -0.13
PSPC1-202ENST00000427943 SRRM4A7MD48 611 aaKnown RBP14.2□□□□□ -0.14
PSPC1-202ENST00000427943 SAP30O75446 220 aa14.2□□□□□ -0.14
PSPC1-202ENST00000427943 CRYZL1O95825 349 aa14.2□□□□□ -0.14
PSPC1-202ENST00000427943 NFYAP23511 347 aaPredicted RBP14.2□□□□□ -0.14
PSPC1-202ENST00000427943 LGALS7P47929 136 aa14.2□□□□□ -0.14
PSPC1-202ENST00000427943 GNG2P59768 71 aa14.2□□□□□ -0.14
PSPC1-202ENST00000427943 DEFA5Q01523 94 aa14.2□□□□□ -0.14
PSPC1-202ENST00000427943 DDB2Q92466 427 aa14.2□□□□□ -0.14
PSPC1-202ENST00000427943 SLA2Q9H6Q3 261 aa14.2□□□□□ -0.14
PSPC1-202ENST00000427943 RHBDL2Q9NX52 303 aa14.2□□□□□ -0.14
PSPC1-202ENST00000427943 LSM4Q9Y4Z0 139 aaKnown RBP14.2□□□□□ -0.14
PSPC1-202ENST00000427943 SSX5O60225 188 aa14.19□□□□□ -0.14
PSPC1-202ENST00000427943 RRASP10301 218 aa14.19□□□□□ -0.14
PSPC1-202ENST00000427943 INSL3P51460 131 aa14.19□□□□□ -0.14
PSPC1-202ENST00000427943 TAGLNQ01995 201 aaKnown RBP14.19□□□□□ -0.14
PSPC1-202ENST00000427943 IDO2Q6ZQW0 420 aa14.19□□□□□ -0.14
PSPC1-202ENST00000427943 POC5Q8NA72 575 aa14.19□□□□□ -0.14
PSPC1-202ENST00000427943 OR5H6Q8NGV6 325 aa14.19□□□□□ -0.14
PSPC1-202ENST00000427943 ADTRPQ96IZ2 230 aa14.19□□□□□ -0.14
PSPC1-202ENST00000427943 RHOVQ96L33 236 aa14.19□□□□□ -0.14
PSPC1-202ENST00000427943 CENPOQ9BU64 300 aa14.19□□□□□ -0.14
PSPC1-202ENST00000427943 SCGNO76038 276 aa14.18□□□□□ -0.14
PSPC1-202ENST00000427943 HSPB1P04792 205 aaKnown RBP14.18□□□□□ -0.14
PSPC1-202ENST00000427943 APELAP0DMC3 54 aa14.18□□□□□ -0.14
PSPC1-202ENST00000427943 CD36P16671 472 aa14.18□□□□□ -0.14
PSPC1-202ENST00000427943 MRGPRG-AS1Q2M3A8 158 aa14.18□□□□□ -0.14
PSPC1-202ENST00000427943 IDNKQ5T6J7 187 aa14.18□□□□□ -0.14
PSPC1-202ENST00000427943 ZNF429Q86V71 674 aa14.18□□□□□ -0.14
PSPC1-202ENST00000427943 ZNF645Q8N7E2 425 aa14.18□□□□□ -0.14
PSPC1-202ENST00000427943 SLC25A38Q96DW6 304 aa14.18□□□□□ -0.14
PSPC1-202ENST00000427943 DCSTAMPQ9H295 470 aa14.18□□□□□ -0.14
PSPC1-202ENST00000427943 PITPNAQ00169 270 aa14.17□□□□□ -0.14
PSPC1-202ENST00000427943 TNXAQ16473 311 aa14.17□□□□□ -0.14
PSPC1-202ENST00000427943 VMA21Q3ZAQ7 101 aa14.17□□□□□ -0.14
PSPC1-202ENST00000427943 OR2B11Q5JQS5 317 aa14.17□□□□□ -0.14
PSPC1-202ENST00000427943 KCTD9Q7L273 389 aa14.17□□□□□ -0.14
PSPC1-202ENST00000427943 PHB2Q99623 299 aa14.17□□□□□ -0.14
PSPC1-202ENST00000427943 OR2W1Q9Y3N9 320 aa14.17□□□□□ -0.14
PSPC1-202ENST00000427943 DNAH9Q9NYC9 4486 aa14.17□□□□□ -0.14
PSPC1-202ENST00000427943 IGKV1D-13A0A0B4J2D9 117 aa14.16□□□□□ -0.14
PSPC1-202ENST00000427943 C13orf42A0A1B0GVH6 325 aa14.16□□□□□ -0.14
PSPC1-202ENST00000427943 H3BUA1 57 aa14.16□□□□□ -0.14
PSPC1-202ENST00000427943 FCGR3BO75015 233 aa14.16□□□□□ -0.14
PSPC1-202ENST00000427943 CTXN2P0C2S0 81 aa14.16□□□□□ -0.14
PSPC1-202ENST00000427943 IGKV1-13P0DP09 117 aa14.16□□□□□ -0.14
PSPC1-202ENST00000427943 UBE2KP61086 200 aa14.16□□□□□ -0.14
PSPC1-202ENST00000427943 KCTD21Q4G0X4 260 aa14.16□□□□□ -0.14
PSPC1-202ENST00000427943 ACSM6Q6P461 480 aa14.16□□□□□ -0.14
PSPC1-202ENST00000427943 CNIH2Q6PI25 160 aa14.16□□□□□ -0.14
PSPC1-202ENST00000427943 ACOT12Q8WYK0 555 aa14.16□□□□□ -0.14
PSPC1-202ENST00000427943 COA4Q9NYJ1 87 aa14.16□□□□□ -0.14
PSPC1-202ENST00000427943 ANXA10Q9UJ72 324 aa14.16□□□□□ -0.14
PSPC1-202ENST00000427943 RBMX2Q9Y388 322 aaKnown RBP14.16□□□□□ -0.14
PSPC1-202ENST00000427943 TRAV18A0A075B6X5 111 aa14.15□□□□□ -0.14
PSPC1-202ENST00000427943 ANKRD34BA5PLL1 514 aa14.15□□□□□ -0.14
PSPC1-202ENST00000427943 TUSC2O75896 110 aa14.15□□□□□ -0.14
PSPC1-202ENST00000427943 HLA-DQB1P01920 261 aa14.15□□□□□ -0.14
PSPC1-202ENST00000427943 SPNP16150 400 aa14.15□□□□□ -0.14
PSPC1-202ENST00000427943 TGFBR1P36897 503 aa14.15□□□□□ -0.14
PSPC1-202ENST00000427943 RPL30P62888 115 aaKnown RBP14.15□□□□□ -0.14
PSPC1-202ENST00000427943 PRSS8Q16651 343 aa14.15□□□□□ -0.14
PSPC1-202ENST00000427943 HAPLN4Q86UW8 402 aa14.15□□□□□ -0.14
PSPC1-202ENST00000427943 TEX45Q8NA69 505 aa14.15□□□□□ -0.14
PSPC1-202ENST00000427943 OSR1Q8TAX0 266 aaPredicted RBP14.15□□□□□ -0.14
PSPC1-202ENST00000427943 ASCL2Q99929 193 aa14.15□□□□□ -0.14
PSPC1-202ENST00000427943 DCUN1D5Q9BTE7 237 aa14.15□□□□□ -0.14
PSPC1-202ENST00000427943 ETV7Q9Y603 341 aa14.15□□□□□ -0.14
PSPC1-202ENST00000427943 MSGN1A6NI15 193 aa14.14□□□□□ -0.15
PSPC1-202ENST00000427943 IGLV2-14P01704 120 aa14.14□□□□□ -0.15
PSPC1-202ENST00000427943 SAA1P0DJI8 122 aaPredicted RBP14.14□□□□□ -0.15
PSPC1-202ENST00000427943 PTHLHP12272 177 aa14.14□□□□□ -0.15
PSPC1-202ENST00000427943 GVQW1Q8N7I0 195 aa14.14□□□□□ -0.15
PSPC1-202ENST00000427943 SRSF12Q8WXF0 261 aaKnown RBP14.14□□□□□ -0.15
PSPC1-202ENST00000427943 TINAGL1Q9GZM7 467 aaPredicted RBP14.14□□□□□ -0.15
PSPC1-202ENST00000427943 ZNF430Q9H8G1 570 aaPredicted RBP14.14□□□□□ -0.15
PSPC1-202ENST00000427943 A0A0G2JLM5 398 aa14.13□□□□□ -0.15
PSPC1-202ENST00000427943 MPPED1O15442 326 aa14.13□□□□□ -0.15
PSPC1-202ENST00000427943 FCER2P06734 321 aa14.13□□□□□ -0.15
PSPC1-202ENST00000427943 SCAND1P57086 179 aa14.13□□□□□ -0.15
PSPC1-202ENST00000427943 ARPC4P59998 168 aa14.13□□□□□ -0.15
PSPC1-202ENST00000427943 CDK10Q15131 360 aa14.13□□□□□ -0.15
PSPC1-202ENST00000427943 C10orf55Q5SWW7 151 aa14.13□□□□□ -0.15
PSPC1-202ENST00000427943 BEST4Q8NFU0 473 aa14.13□□□□□ -0.15
PSPC1-202ENST00000427943 TCTEX1D2Q8WW35 142 aa14.13□□□□□ -0.15
PSPC1-202ENST00000427943 TMEM68Q96MH6 324 aa14.13□□□□□ -0.15
PSPC1-202ENST00000427943 SPATA2Q9UM82 520 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms