RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 IFT46Q9NQC8 304 aa11.6□□□□□ -0.55
RTN4-210ENST00000427710 RBMX2Q9Y388 322 aaKnown RBP11.6□□□□□ -0.55
RTN4-210ENST00000427710 NUBP2Q9Y5Y2 271 aa11.6□□□□□ -0.55
RTN4-210ENST00000427710 CCL24O00175 119 aa11.59□□□□□ -0.55
RTN4-210ENST00000427710 FCGR3BO75015 233 aa11.59□□□□□ -0.55
RTN4-210ENST00000427710 GABARAPO95166 117 aa11.59□□□□□ -0.55
RTN4-210ENST00000427710 SPDEFO95238 335 aa11.59□□□□□ -0.55
RTN4-210ENST00000427710 CRYGBP07316 175 aa11.59□□□□□ -0.55
RTN4-210ENST00000427710 OR5H8P0DN80 308 aa11.59□□□□□ -0.55
RTN4-210ENST00000427710 MYCNOSP40205 109 aa11.59□□□□□ -0.55
RTN4-210ENST00000427710 FXYD4P59646 89 aa11.59□□□□□ -0.55
RTN4-210ENST00000427710 SSBP2P81877 361 aaPredicted RBP11.59□□□□□ -0.55
RTN4-210ENST00000427710 KIAA0141Q14154 515 aaPredicted RBP11.59□□□□□ -0.55
RTN4-210ENST00000427710 RTL8BQ17RB0 113 aa11.59□□□□□ -0.55
RTN4-210ENST00000427710 TMEM177Q53S58 311 aa11.59□□□□□ -0.55
RTN4-210ENST00000427710 FOXB2Q5VYV0 432 aa11.59□□□□□ -0.55
RTN4-210ENST00000427710 TMEM65Q6PI78 240 aa11.59□□□□□ -0.55
RTN4-210ENST00000427710 UNQ5815/PRO19632Q6UWF5 114 aa11.59□□□□□ -0.55
RTN4-210ENST00000427710 IDO2Q6ZQW0 420 aa11.59□□□□□ -0.55
RTN4-210ENST00000427710 GPR141Q7Z602 305 aa11.59□□□□□ -0.55
RTN4-210ENST00000427710 MINDY2Q8NBR6 621 aa11.59□□□□□ -0.55
RTN4-210ENST00000427710 LFNGQ8NES3 379 aa11.59□□□□□ -0.55
RTN4-210ENST00000427710 KCTD12Q96CX2 325 aaKnown RBP11.59□□□□□ -0.55
RTN4-210ENST00000427710 CCL28Q9NRJ3 127 aa11.59□□□□□ -0.55
RTN4-210ENST00000427710 ZNF580Q9UK33 172 aa11.59□□□□□ -0.55
RTN4-210ENST00000427710 MRPS7Q9Y2R9 242 aaKnown RBP11.59□□□□□ -0.55
RTN4-210ENST00000427710 TNFSF12O43508 249 aa11.58□□□□□ -0.56
RTN4-210ENST00000427710 IGLV1-40P01703 118 aa11.58□□□□□ -0.56
RTN4-210ENST00000427710 PMP2P02689 132 aa11.58□□□□□ -0.56
RTN4-210ENST00000427710 ELK1P19419 428 aa11.58□□□□□ -0.56
RTN4-210ENST00000427710 CBX5P45973 191 aa11.58□□□□□ -0.56
RTN4-210ENST00000427710 CDX1P47902 265 aaPredicted RBP11.58□□□□□ -0.56
RTN4-210ENST00000427710 RORCP51449 518 aa11.58□□□□□ -0.56
RTN4-210ENST00000427710 TAGLNQ01995 201 aaKnown RBP11.58□□□□□ -0.56
RTN4-210ENST00000427710 CBX3Q13185 183 aa11.58□□□□□ -0.56
RTN4-210ENST00000427710 FXYD3Q14802 87 aa11.58□□□□□ -0.56
RTN4-210ENST00000427710 MRGPRG-AS1Q2M3A8 158 aa11.58□□□□□ -0.56
RTN4-210ENST00000427710 RNASE12Q5GAN4 147 aaKnown RBP11.58□□□□□ -0.56
RTN4-210ENST00000427710 KPRPQ5T749 579 aaPredicted RBP11.58□□□□□ -0.56
RTN4-210ENST00000427710 ZNF562Q6V9R5 426 aa11.58□□□□□ -0.56
RTN4-210ENST00000427710 KCTD9Q7L273 389 aa11.58□□□□□ -0.56
RTN4-210ENST00000427710 ZNF491Q8N8L2 437 aa11.58□□□□□ -0.56
RTN4-210ENST00000427710 ARPC1AQ92747 370 aa11.58□□□□□ -0.56
RTN4-210ENST00000427710 ADTRPQ96IZ2 230 aa11.58□□□□□ -0.56
RTN4-210ENST00000427710 P2RX4Q99571 388 aa11.58□□□□□ -0.56
RTN4-210ENST00000427710 DCUN1D5Q9BTE7 237 aa11.58□□□□□ -0.56
RTN4-210ENST00000427710 ALX4Q9H161 411 aaPredicted RBP11.58□□□□□ -0.56
RTN4-210ENST00000427710 NECAP2Q9NVZ3 263 aa11.58□□□□□ -0.56
RTN4-210ENST00000427710 TAS2R8Q9NYW2 309 aa11.58□□□□□ -0.56
RTN4-210ENST00000427710 FOXA2Q9Y261 457 aaPredicted RBP11.58□□□□□ -0.56
RTN4-210ENST00000427710 CNIH1O95406 144 aa11.57□□□□□ -0.56
RTN4-210ENST00000427710 PPYP01298 95 aa11.57□□□□□ -0.56
RTN4-210ENST00000427710 APELAP0DMC3 54 aa11.57□□□□□ -0.56
RTN4-210ENST00000427710 RRASP10301 218 aa11.57□□□□□ -0.56
RTN4-210ENST00000427710 HOXD3P31249 432 aaPredicted RBP11.57□□□□□ -0.56
RTN4-210ENST00000427710 LGALS7P47929 136 aa11.57□□□□□ -0.56
RTN4-210ENST00000427710 RFX2P48378 723 aa11.57□□□□□ -0.56
RTN4-210ENST00000427710 RAB9AP51151 201 aa11.57□□□□□ -0.56
RTN4-210ENST00000427710 CRIP2P52943 208 aaPredicted RBP11.57□□□□□ -0.56
RTN4-210ENST00000427710 EIF4EBP1Q13541 118 aaPredicted RBP11.57□□□□□ -0.56
RTN4-210ENST00000427710 CDK10Q15131 360 aa11.57□□□□□ -0.56
RTN4-210ENST00000427710 ACTBL2Q562R1 376 aa11.57□□□□□ -0.56
RTN4-210ENST00000427710 SNX29P2Q8IUI4 249 aa11.57□□□□□ -0.56
RTN4-210ENST00000427710 OR5T1Q8NG75 326 aa11.57□□□□□ -0.56
RTN4-210ENST00000427710 OR5AP2Q8NGF4 316 aa11.57□□□□□ -0.56
RTN4-210ENST00000427710 MYOZ3Q8TDC0 251 aa11.57□□□□□ -0.56
RTN4-210ENST00000427710 TCTEX1D2Q8WW35 142 aa11.57□□□□□ -0.56
RTN4-210ENST00000427710 MS4A10Q96PG2 267 aa11.57□□□□□ -0.56
RTN4-210ENST00000427710 SLC5A7Q9GZV3 580 aa11.57□□□□□ -0.56
RTN4-210ENST00000427710 EHFQ9NZC4 300 aa11.57□□□□□ -0.56
RTN4-210ENST00000427710 SORL1Q92673 2214 aa11.57□□□□□ -0.56
RTN4-210ENST00000427710 FAM25AB3EWG3 89 aa11.56□□□□□ -0.56
RTN4-210ENST00000427710 FAM25CB3EWG5 89 aa11.56□□□□□ -0.56
RTN4-210ENST00000427710 FAM25GB3EWG6 89 aa11.56□□□□□ -0.56
RTN4-210ENST00000427710 APOA1P02647 267 aa11.56□□□□□ -0.56
RTN4-210ENST00000427710 PRSS3P35030 304 aa11.56□□□□□ -0.56
RTN4-210ENST00000427710 SPCS2Q15005 226 aa11.56□□□□□ -0.56
RTN4-210ENST00000427710 CLVS1Q8IUQ0 354 aaPredicted RBP11.56□□□□□ -0.56
RTN4-210ENST00000427710 VKORC1L1Q8N0U8 176 aa11.56□□□□□ -0.56
RTN4-210ENST00000427710 MFSD4AQ8N468 514 aa11.56□□□□□ -0.56
RTN4-210ENST00000427710 C4orf3Q8WVX3 66 aa11.56□□□□□ -0.56
RTN4-210ENST00000427710 RCC1LQ96I51 464 aaKnown RBP11.56□□□□□ -0.56
RTN4-210ENST00000427710 ANAPC10Q9UM13 185 aa11.56□□□□□ -0.56
RTN4-210ENST00000427710 SLC22A5O76082 557 aa11.55□□□□□ -0.56
RTN4-210ENST00000427710 IGHV3-11P01762 117 aa11.55□□□□□ -0.56
RTN4-210ENST00000427710 SAA1P0DJI8 122 aaPredicted RBP11.55□□□□□ -0.56
RTN4-210ENST00000427710 HLA-DMAP28067 261 aa11.55□□□□□ -0.56
RTN4-210ENST00000427710 BRWD1-AS2P59051 145 aa11.55□□□□□ -0.56
RTN4-210ENST00000427710 KRTAP10-11P60412 298 aa11.55□□□□□ -0.56
RTN4-210ENST00000427710 DEFA5Q01523 94 aa11.55□□□□□ -0.56
RTN4-210ENST00000427710 TMEM267Q0VDI3 215 aaPredicted RBP11.55□□□□□ -0.56
RTN4-210ENST00000427710 TNXAQ16473 311 aa11.55□□□□□ -0.56
RTN4-210ENST00000427710 VMA21Q3ZAQ7 101 aa11.55□□□□□ -0.56
RTN4-210ENST00000427710 ASPHD1Q5U4P2 390 aa11.55□□□□□ -0.56
RTN4-210ENST00000427710 TMEM17Q86X19 198 aa11.55□□□□□ -0.56
RTN4-210ENST00000427710 OR11H1Q8NG94 326 aa11.55□□□□□ -0.56
RTN4-210ENST00000427710 ACOT12Q8WYK0 555 aa11.55□□□□□ -0.56
RTN4-210ENST00000427710 AURKAIP1Q9NWT8 199 aaPredicted RBP11.55□□□□□ -0.56
RTN4-210ENST00000427710 VSIG4Q9Y279 399 aa11.55□□□□□ -0.56
RTN4-210ENST00000427710 PRELID3BQ9Y3B1 194 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms