RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 SBSPONQ8IVN8 264 aa8.87□□□□□ -0.99
SQSTM1-203ENST00000422245 C5orf30Q96GV9 206 aa8.87□□□□□ -0.99
SQSTM1-203ENST00000422245 RBM7Q9Y580 266 aaKnown RBP8.87□□□□□ -0.99
SQSTM1-203ENST00000422245 TRDV1A0A1B0GX56 115 aa8.86□□□□□ -0.99
SQSTM1-203ENST00000422245 SHISA3A0PJX4 238 aa8.86□□□□□ -0.99
SQSTM1-203ENST00000422245 TRIM64CA6NLI5 447 aa8.86□□□□□ -0.99
SQSTM1-203ENST00000422245 CREBL2O60519 120 aaPredicted RBP8.86□□□□□ -0.99
SQSTM1-203ENST00000422245 IGLV1-51P01701 117 aa8.86□□□□□ -0.99
SQSTM1-203ENST00000422245 RAB3BP20337 219 aa8.86□□□□□ -0.99
SQSTM1-203ENST00000422245 DTYMKP23919 212 aa8.86□□□□□ -0.99
SQSTM1-203ENST00000422245 UBE2KP61086 200 aa8.86□□□□□ -0.99
SQSTM1-203ENST00000422245 PJVKQ0ZLH3 352 aa8.86□□□□□ -0.99
SQSTM1-203ENST00000422245 ARFRP1Q13795 201 aa8.86□□□□□ -0.99
SQSTM1-203ENST00000422245 OVCH2Q7RTZ1 564 aa8.86□□□□□ -0.99
SQSTM1-203ENST00000422245 ANKRD13BQ86YJ7 626 aa8.86□□□□□ -0.99
SQSTM1-203ENST00000422245 H1FOOQ8IZA3 346 aaPredicted RBP8.86□□□□□ -0.99
SQSTM1-203ENST00000422245 BVESQ8NE79 360 aa8.86□□□□□ -0.99
SQSTM1-203ENST00000422245 OR5T1Q8NG75 326 aa8.86□□□□□ -0.99
SQSTM1-203ENST00000422245 MUC7Q8TAX7 377 aa8.86□□□□□ -0.99
SQSTM1-203ENST00000422245 MAFIPQ8WZ33 124 aa8.86□□□□□ -0.99
SQSTM1-203ENST00000422245 CNBD2Q96M20 576 aa8.86□□□□□ -0.99
SQSTM1-203ENST00000422245 RSRP1Q9BUV0 290 aa8.86□□□□□ -0.99
SQSTM1-203ENST00000422245 TINAGL1Q9GZM7 467 aaPredicted RBP8.86□□□□□ -0.99
SQSTM1-203ENST00000422245 ZMAT4Q9H898 229 aa8.86□□□□□ -0.99
SQSTM1-203ENST00000422245 ZNF230Q9UIE0 474 aaPredicted RBP8.86□□□□□ -0.99
SQSTM1-203ENST00000422245 MRPS14O60783 128 aaKnown RBP8.85□□□□□ -0.99
SQSTM1-203ENST00000422245 DUTP33316 252 aaKnown RBP8.85□□□□□ -0.99
SQSTM1-203ENST00000422245 GABARAPL2P60520 117 aa8.85□□□□□ -0.99
SQSTM1-203ENST00000422245 KLF5Q13887 457 aaPredicted RBP8.85□□□□□ -0.99
SQSTM1-203ENST00000422245 PRSS8Q16651 343 aa8.85□□□□□ -0.99
SQSTM1-203ENST00000422245 HAPLN4Q86UW8 402 aa8.85□□□□□ -0.99
SQSTM1-203ENST00000422245 SGPP2Q8IWX5 399 aa8.85□□□□□ -0.99
SQSTM1-203ENST00000422245 TEX45Q8NA69 505 aa8.85□□□□□ -0.99
SQSTM1-203ENST00000422245 OR9G4Q8NGQ1 327 aa8.85□□□□□ -0.99
SQSTM1-203ENST00000422245 OSR1Q8TAX0 266 aaPredicted RBP8.85□□□□□ -0.99
SQSTM1-203ENST00000422245 DDB2Q92466 427 aa8.85□□□□□ -0.99
SQSTM1-203ENST00000422245 USMG5Q96IX5 58 aa8.85□□□□□ -0.99
SQSTM1-203ENST00000422245 PHB2Q99623 299 aa8.85□□□□□ -0.99
SQSTM1-203ENST00000422245 COA4Q9NYJ1 87 aa8.85□□□□□ -0.99
SQSTM1-203ENST00000422245 A0A0B4J203 849 aa8.84□□□□□ -0.99
SQSTM1-203ENST00000422245 ANKRD34BA5PLL1 514 aa8.84□□□□□ -0.99
SQSTM1-203ENST00000422245 SRRM4A7MD48 611 aaKnown RBP8.84□□□□□ -0.99
SQSTM1-203ENST00000422245 MPPED1O15442 326 aa8.84□□□□□ -0.99
SQSTM1-203ENST00000422245 SCGNO76038 276 aa8.84□□□□□ -0.99
SQSTM1-203ENST00000422245 CRYZL1O95825 349 aa8.84□□□□□ -0.99
SQSTM1-203ENST00000422245 IGHV4-30-4P0DP06 118 aa8.84□□□□□ -0.99
SQSTM1-203ENST00000422245 DYRK1AQ13627 763 aa8.84□□□□□ -0.99
SQSTM1-203ENST00000422245 TNXAQ16473 311 aa8.84□□□□□ -0.99
SQSTM1-203ENST00000422245 C22orf42Q6IC83 251 aa8.84□□□□□ -0.99
SQSTM1-203ENST00000422245 ZNF343Q6P1L6 599 aa8.84□□□□□ -0.99
SQSTM1-203ENST00000422245 ADAD2Q8NCV1 583 aaKnown RBP8.84□□□□□ -0.99
SQSTM1-203ENST00000422245 SRSF12Q8WXF0 261 aaKnown RBP8.84□□□□□ -0.99
SQSTM1-203ENST00000422245 ATG5Q9H1Y0 275 aa8.84□□□□□ -0.99
SQSTM1-203ENST00000422245 PEF1Q9UBV8 284 aaKnown RBP8.84□□□□□ -0.99
SQSTM1-203ENST00000422245 RAB26Q9ULW5 256 aa8.84□□□□□ -0.99
SQSTM1-203ENST00000422245 MSGN1A6NI15 193 aa8.83□□□□□ -1
SQSTM1-203ENST00000422245 FAM223BA6NKX1 122 aa8.83□□□□□ -1
SQSTM1-203ENST00000422245 NOTOA8MTQ0 251 aa8.83□□□□□ -1
SQSTM1-203ENST00000422245 A8MZ25 164 aa8.83□□□□□ -1
SQSTM1-203ENST00000422245 H0Y980 276 aa8.83□□□□□ -1
SQSTM1-203ENST00000422245 SLC22A5O76082 557 aa8.83□□□□□ -1
SQSTM1-203ENST00000422245 ACTL6BO94805 426 aa8.83□□□□□ -1
SQSTM1-203ENST00000422245 OR2A4O95047 310 aa8.83□□□□□ -1
SQSTM1-203ENST00000422245 CTXN2P0C2S0 81 aa8.83□□□□□ -1
SQSTM1-203ENST00000422245 OR9G9P0C7N8 305 aa8.83□□□□□ -1
SQSTM1-203ENST00000422245 CD36P16671 472 aa8.83□□□□□ -1
SQSTM1-203ENST00000422245 SYNJ2BPP57105 145 aa8.83□□□□□ -1
SQSTM1-203ENST00000422245 TATDN3Q17R31 274 aa8.83□□□□□ -1
SQSTM1-203ENST00000422245 MRGPRG-AS1Q2M3A8 158 aa8.83□□□□□ -1
SQSTM1-203ENST00000422245 RPEL1Q2QD12 228 aa8.83□□□□□ -1
SQSTM1-203ENST00000422245 IDO2Q6ZQW0 420 aa8.83□□□□□ -1
SQSTM1-203ENST00000422245 NR2C2APQ86WQ0 139 aa8.83□□□□□ -1
SQSTM1-203ENST00000422245 FAM223AQ8IWN6 122 aa8.83□□□□□ -1
SQSTM1-203ENST00000422245 ZNF645Q8N7E2 425 aa8.83□□□□□ -1
SQSTM1-203ENST00000422245 ACOT12Q8WYK0 555 aa8.83□□□□□ -1
SQSTM1-203ENST00000422245 FCGR1BQ92637 280 aa8.83□□□□□ -1
SQSTM1-203ENST00000422245 TM2D3Q9BRN9 247 aa8.83□□□□□ -1
SQSTM1-203ENST00000422245 DCSTAMPQ9H295 470 aa8.83□□□□□ -1
SQSTM1-203ENST00000422245 SIGLEC8Q9NYZ4 499 aa8.83□□□□□ -1
SQSTM1-203ENST00000422245 MRPS7Q9Y2R9 242 aaKnown RBP8.83□□□□□ -1
SQSTM1-203ENST00000422245 TNCP24821 2201 aa8.82□□□□□ -1
SQSTM1-203ENST00000422245 HUWE1Q7Z6Z7 4374 aaKnown RBP8.82□□□□□ -1
SQSTM1-203ENST00000422245 IGKV1D-8A0A087WSZ0 117 aa8.82□□□□□ -1
SQSTM1-203ENST00000422245 LINC00473A8K010 186 aa8.82□□□□□ -1
SQSTM1-203ENST00000422245 SAA1P0DJI8 122 aaPredicted RBP8.82□□□□□ -1
SQSTM1-203ENST00000422245 PSMB9P28065 219 aa8.82□□□□□ -1
SQSTM1-203ENST00000422245 FGF9P31371 208 aaPredicted RBP8.82□□□□□ -1
SQSTM1-203ENST00000422245 DEFA5Q01523 94 aa8.82□□□□□ -1
SQSTM1-203ENST00000422245 CDK10Q15131 360 aa8.82□□□□□ -1
SQSTM1-203ENST00000422245 CDNFQ49AH0 187 aa8.82□□□□□ -1
SQSTM1-203ENST00000422245 CASC10Q5T4H9 136 aa8.82□□□□□ -1
SQSTM1-203ENST00000422245 UBE2UQ5VVX9 321 aa8.82□□□□□ -1
SQSTM1-203ENST00000422245 HACD4Q5VWC8 232 aa8.82□□□□□ -1
SQSTM1-203ENST00000422245 LCN12Q6JVE5 192 aa8.82□□□□□ -1
SQSTM1-203ENST00000422245 IL34Q6ZMJ4 242 aa8.82□□□□□ -1
SQSTM1-203ENST00000422245 KCTD9Q7L273 389 aa8.82□□□□□ -1
SQSTM1-203ENST00000422245 MMD2Q8IY49 270 aa8.82□□□□□ -1
SQSTM1-203ENST00000422245 Q8N1Y9 231 aa8.82□□□□□ -1
SQSTM1-203ENST00000422245 Q8N402 240 aa8.82□□□□□ -1
SQSTM1-203ENST00000422245 SNAPC3Q92966 411 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms