RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 SEC22CQ9BRL7 303 aa10.03□□□□□ -0.8
TMEM53-206ENST00000420706 FAM212BQ9NTI7 297 aaPredicted RBP10.03□□□□□ -0.8
TMEM53-206ENST00000420706 LIN7CQ9NUP9 197 aaKnown RBP10.03□□□□□ -0.8
TMEM53-206ENST00000420706 CDC42EP3Q9UKI2 254 aa10.03□□□□□ -0.8
TMEM53-206ENST00000420706 WASHC3Q9Y3C0 194 aa10.03□□□□□ -0.8
TMEM53-206ENST00000420706 F8P00451 2351 aa10.03□□□□□ -0.8
TMEM53-206ENST00000420706 H7C2Y5 167 aa10.02□□□□□ -0.81
TMEM53-206ENST00000420706 PRAF2O60831 178 aa10.02□□□□□ -0.81
TMEM53-206ENST00000420706 HPRT1P00492 218 aa10.02□□□□□ -0.81
TMEM53-206ENST00000420706 IFNA2P01563 188 aa10.02□□□□□ -0.81
TMEM53-206ENST00000420706 IGKV1D-33P01593 117 aa10.02□□□□□ -0.81
TMEM53-206ENST00000420706 IGKV1-33P01594 117 aa10.02□□□□□ -0.81
TMEM53-206ENST00000420706 SNRNP70P08621 437 aaKnown RBP10.02□□□□□ -0.81
TMEM53-206ENST00000420706 VAMP1P23763 118 aa10.02□□□□□ -0.81
TMEM53-206ENST00000420706 CD24P25063 80 aa10.02□□□□□ -0.81
TMEM53-206ENST00000420706 DHRS2Q13268 280 aa10.02□□□□□ -0.81
TMEM53-206ENST00000420706 RTL8BQ17RB0 113 aa10.02□□□□□ -0.81
TMEM53-206ENST00000420706 LRRC75BQ2VPJ9 315 aa10.02□□□□□ -0.81
TMEM53-206ENST00000420706 TMEM177Q53S58 311 aa10.02□□□□□ -0.81
TMEM53-206ENST00000420706 ZDHHC16Q969W1 377 aa10.02□□□□□ -0.81
TMEM53-206ENST00000420706 FLYWCH2Q96CP2 140 aaKnown RBP10.02□□□□□ -0.81
TMEM53-206ENST00000420706 RITA1Q96K30 269 aa10.02□□□□□ -0.81
TMEM53-206ENST00000420706 TMEM222Q9H0R3 208 aa10.02□□□□□ -0.81
TMEM53-206ENST00000420706 HIVEP1P15822 2718 aa10.02□□□□□ -0.81
TMEM53-206ENST00000420706 CDS2O95674 445 aa10.01□□□□□ -0.81
TMEM53-206ENST00000420706 CRYZL1O95825 349 aa10.01□□□□□ -0.81
TMEM53-206ENST00000420706 MOSP00540 346 aa10.01□□□□□ -0.81
TMEM53-206ENST00000420706 IGKV1-39P01597 117 aa10.01□□□□□ -0.81
TMEM53-206ENST00000420706 HLA-AP01891 365 aaKnown RBP10.01□□□□□ -0.81
TMEM53-206ENST00000420706 IGKV1-16P04430 117 aa10.01□□□□□ -0.81
TMEM53-206ENST00000420706 IGKV1D-39P04432 117 aa10.01□□□□□ -0.81
TMEM53-206ENST00000420706 ANXA3P12429 323 aa10.01□□□□□ -0.81
TMEM53-206ENST00000420706 SRD5A1P18405 259 aa10.01□□□□□ -0.81
TMEM53-206ENST00000420706 IER3P46695 156 aa10.01□□□□□ -0.81
TMEM53-206ENST00000420706 RPS16P62249 146 aaKnown RBP10.01□□□□□ -0.81
TMEM53-206ENST00000420706 ANKRD55Q3KP44 614 aa10.01□□□□□ -0.81
TMEM53-206ENST00000420706 FBLN7Q53RD9 439 aa10.01□□□□□ -0.81
TMEM53-206ENST00000420706 DHRS7BQ6IAN0 325 aaPredicted RBP10.01□□□□□ -0.81
TMEM53-206ENST00000420706 LIAT1Q6ZQX7 453 aa10.01□□□□□ -0.81
TMEM53-206ENST00000420706 SELENOHQ8IZQ5 122 aaKnown RBP10.01□□□□□ -0.81
TMEM53-206ENST00000420706 OR2T10Q8NGZ9 312 aa10.01□□□□□ -0.81
TMEM53-206ENST00000420706 OR4S2Q8NH73 311 aa10.01□□□□□ -0.81
TMEM53-206ENST00000420706 LHFPL5Q8TAF8 219 aa10.01□□□□□ -0.81
TMEM53-206ENST00000420706 ZNF431Q8TF32 576 aaPredicted RBP10.01□□□□□ -0.81
TMEM53-206ENST00000420706 CASTOR1Q8WTX7 329 aa10.01□□□□□ -0.81
TMEM53-206ENST00000420706 EAF1Q96JC9 268 aaPredicted RBP10.01□□□□□ -0.81
TMEM53-206ENST00000420706 TMEM56Q96MV1 263 aa10.01□□□□□ -0.81
TMEM53-206ENST00000420706 RNF5Q99942 180 aa10.01□□□□□ -0.81
TMEM53-206ENST00000420706 PRR13Q9NZ81 148 aa10.01□□□□□ -0.81
TMEM53-206ENST00000420706 TMEM56-RWDD3S4R434 201 aa10.01□□□□□ -0.81
TMEM53-206ENST00000420706 ANK3Q12955 4377 aaKnown RBP10.01□□□□□ -0.81
TMEM53-206ENST00000420706 CELSR1Q9NYQ6 3014 aa10□□□□□ -0.81
TMEM53-206ENST00000420706 A0A0A6YYJ9 748 aa10□□□□□ -0.81
TMEM53-206ENST00000420706 A0A0B4J293 547 aa10□□□□□ -0.81
TMEM53-206ENST00000420706 SRRM4A7MD48 611 aaKnown RBP10□□□□□ -0.81
TMEM53-206ENST00000420706 SNRPGP15A8MWD9 76 aa10□□□□□ -0.81
TMEM53-206ENST00000420706 H3BUX3 64 aa10□□□□□ -0.81
TMEM53-206ENST00000420706 S1PR2O95136 353 aa10□□□□□ -0.81
TMEM53-206ENST00000420706 DUS4LO95620 317 aaKnown RBP10□□□□□ -0.81
TMEM53-206ENST00000420706 SERPINE2P07093 398 aa10□□□□□ -0.81
TMEM53-206ENST00000420706 FAM106CPP0CH98 169 aa10□□□□□ -0.81
TMEM53-206ENST00000420706 RPA2P15927 270 aa10□□□□□ -0.81
TMEM53-206ENST00000420706 CBX3Q13185 183 aa10□□□□□ -0.81
TMEM53-206ENST00000420706 SCGB2A2Q13296 93 aa10□□□□□ -0.81
TMEM53-206ENST00000420706 HES1Q14469 280 aa10□□□□□ -0.81
TMEM53-206ENST00000420706 HNF4GQ14541 408 aa10□□□□□ -0.81
TMEM53-206ENST00000420706 TATDN3Q17R31 274 aa10□□□□□ -0.81
TMEM53-206ENST00000420706 Q6ZNX1 250 aa10□□□□□ -0.81
TMEM53-206ENST00000420706 LGI3Q8N145 548 aa10□□□□□ -0.81
TMEM53-206ENST00000420706 Q8N6K4 173 aa10□□□□□ -0.81
TMEM53-206ENST00000420706 SIGLECL1Q8N7X8 197 aa10□□□□□ -0.81
TMEM53-206ENST00000420706 LRTM2Q8N967 370 aa10□□□□□ -0.81
TMEM53-206ENST00000420706 OR4C13Q8NGP0 309 aa10□□□□□ -0.81
TMEM53-206ENST00000420706 OSR1Q8TAX0 266 aaPredicted RBP10□□□□□ -0.81
TMEM53-206ENST00000420706 MITD1Q8WV92 249 aa10□□□□□ -0.81
TMEM53-206ENST00000420706 PLEKHA2Q9HB19 425 aa10□□□□□ -0.81
TMEM53-206ENST00000420706 GPN1Q9HCN4 374 aaPredicted RBP10□□□□□ -0.81
TMEM53-206ENST00000420706 ZANQ9Y493 2812 aa10□□□□□ -0.81
TMEM53-206ENST00000420706 A0A0B4J2A0 478 aa9.99□□□□□ -0.81
TMEM53-206ENST00000420706 C7orf66A4D0T2 115 aa9.99□□□□□ -0.81
TMEM53-206ENST00000420706 SHOXO15266 292 aa9.99□□□□□ -0.81
TMEM53-206ENST00000420706 CRLF1O75462 422 aa9.99□□□□□ -0.81
TMEM53-206ENST00000420706 IGLV2-23P01705 113 aa9.99□□□□□ -0.81
TMEM53-206ENST00000420706 TMEM11P17152 192 aa9.99□□□□□ -0.81
TMEM53-206ENST00000420706 LGALS7P47929 136 aa9.99□□□□□ -0.81
TMEM53-206ENST00000420706 LIN54Q6MZP7 749 aa9.99□□□□□ -0.81
TMEM53-206ENST00000420706 ZNF695Q8IW36 515 aa9.99□□□□□ -0.81
TMEM53-206ENST00000420706 C12orf45Q8N5I9 185 aaPredicted RBP9.99□□□□□ -0.81
TMEM53-206ENST00000420706 COQ8AQ8NI60 647 aa9.99□□□□□ -0.81
TMEM53-206ENST00000420706 IL22RA2Q969J5 263 aa9.99□□□□□ -0.81
TMEM53-206ENST00000420706 R3HDM4Q96D70 268 aa9.99□□□□□ -0.81
TMEM53-206ENST00000420706 COMMD9Q9P000 198 aa9.99□□□□□ -0.81
TMEM53-206ENST00000420706 SHPKQ9UHJ6 478 aa9.99□□□□□ -0.81
TMEM53-206ENST00000420706 TCF19Q9Y242 345 aa9.99□□□□□ -0.81
TMEM53-206ENST00000420706 ALG5Q9Y673 324 aa9.99□□□□□ -0.81
TMEM53-206ENST00000420706 A6NDX4 124 aa9.98□□□□□ -0.81
TMEM53-206ENST00000420706 CREBL2O60519 120 aaPredicted RBP9.98□□□□□ -0.81
TMEM53-206ENST00000420706 HRASP01112 189 aa9.98□□□□□ -0.81
TMEM53-206ENST00000420706 IGHV4-59P01825 116 aa9.98□□□□□ -0.81
TMEM53-206ENST00000420706 NQO2P16083 231 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms