RNA–Protein interactions for RNA: ENST00000414120.1

LINC00887-202, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 2,880 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-202ENST00000414120 HPNP05981 417 aa11.73□□□□□ -0.53
LINC00887-202ENST00000414120 TMEM92Q6UXU6 159 aa11.73□□□□□ -0.53
LINC00887-202ENST00000414120 LRTM2Q8N967 370 aa11.73□□□□□ -0.53
LINC00887-202ENST00000414120 ZNF439Q8NDP4 499 aa11.73□□□□□ -0.53
LINC00887-202ENST00000414120 VGLL1Q99990 258 aa11.73□□□□□ -0.53
LINC00887-202ENST00000414120 SFXN3Q9BWM7 321 aa11.73□□□□□ -0.53
LINC00887-202ENST00000414120 GNB4Q9HAV0 340 aa11.73□□□□□ -0.53
LINC00887-202ENST00000414120 IER3IP1Q9Y5U9 82 aa11.73□□□□□ -0.53
LINC00887-202ENST00000414120 CA1P00915 261 aaPredicted RBP11.73□□□□□ -0.53
LINC00887-202ENST00000414120 SRD5A1P18405 259 aa11.73□□□□□ -0.53
LINC00887-202ENST00000414120 COL9A1P20849 921 aa11.73□□□□□ -0.53
LINC00887-202ENST00000414120 UBE2G1P62253 170 aa11.73□□□□□ -0.53
LINC00887-202ENST00000414120 TGFBR3Q03167 851 aa11.73□□□□□ -0.53
LINC00887-202ENST00000414120 TIGITQ495A1 244 aa11.73□□□□□ -0.53
LINC00887-202ENST00000414120 RFLNBQ8N5W9 214 aa11.73□□□□□ -0.53
LINC00887-202ENST00000414120 TEX29Q8N6K0 151 aa11.73□□□□□ -0.53
LINC00887-202ENST00000414120 LSM10Q969L4 123 aaKnown RBP11.73□□□□□ -0.53
LINC00887-202ENST00000414120 C10orf35Q96D05 121 aa11.73□□□□□ -0.53
LINC00887-202ENST00000414120 C11orf1Q9H5F2 150 aa11.73□□□□□ -0.53
LINC00887-202ENST00000414120 B4GALT7Q9UBV7 327 aa11.73□□□□□ -0.53
LINC00887-202ENST00000414120 KMT2EQ8IZD2 1858 aa11.73□□□□□ -0.53
LINC00887-202ENST00000414120 USP34Q70CQ2 3546 aa11.73□□□□□ -0.53
LINC00887-202ENST00000414120 TNRC6AQ8NDV7 1962 aaKnown RBP11.73□□□□□ -0.53
LINC00887-202ENST00000414120 SOCS1O15524 211 aa11.73□□□□□ -0.53
LINC00887-202ENST00000414120 SYNGR3O43761 229 aa11.73□□□□□ -0.53
LINC00887-202ENST00000414120 FCN3O75636 299 aa11.73□□□□□ -0.53
LINC00887-202ENST00000414120 CELA2AP08217 269 aa11.73□□□□□ -0.53
LINC00887-202ENST00000414120 CELA2BP08218 269 aaPredicted RBP11.73□□□□□ -0.53
LINC00887-202ENST00000414120 UQCRFS1P47985 274 aa11.73□□□□□ -0.53
LINC00887-202ENST00000414120 ZNF74Q16587 644 aa11.73□□□□□ -0.53
LINC00887-202ENST00000414120 PEAR1Q5VY43 1037 aaPredicted RBP11.73□□□□□ -0.53
LINC00887-202ENST00000414120 DOK3Q7L591 496 aa11.73□□□□□ -0.53
LINC00887-202ENST00000414120 ZNF547Q8IVP9 402 aa11.73□□□□□ -0.53
LINC00887-202ENST00000414120 ASCL2Q99929 193 aa11.73□□□□□ -0.53
LINC00887-202ENST00000414120 MAP1LC3CQ9BXW4 147 aa11.73□□□□□ -0.53
LINC00887-202ENST00000414120 PRSS16Q9NQE7 514 aa11.73□□□□□ -0.53
LINC00887-202ENST00000414120 MBNL3Q9NUK0 354 aaKnown RBP11.73□□□□□ -0.53
LINC00887-202ENST00000414120 DCDC2BA2VCK2 349 aa11.72□□□□□ -0.53
LINC00887-202ENST00000414120 PIRTP0C851 137 aa11.72□□□□□ -0.53
LINC00887-202ENST00000414120 MGAT2Q10469 447 aa11.72□□□□□ -0.53
LINC00887-202ENST00000414120 MEX3DQ86XN8 651 aaKnown RBP11.72□□□□□ -0.53
LINC00887-202ENST00000414120 DGAT2Q96PD7 388 aa11.72□□□□□ -0.53
LINC00887-202ENST00000414120 UBTD1Q9HAC8 227 aa11.72□□□□□ -0.53
LINC00887-202ENST00000414120 KCNE3Q9Y6H6 103 aa11.72□□□□□ -0.53
LINC00887-202ENST00000414120 SRIP30626 198 aa11.72□□□□□ -0.53
LINC00887-202ENST00000414120 MRPS21P82921 87 aaKnown RBP11.72□□□□□ -0.53
LINC00887-202ENST00000414120 RTP5Q14D33 572 aa11.72□□□□□ -0.53
LINC00887-202ENST00000414120 ZIC1Q15915 447 aa11.72□□□□□ -0.53
LINC00887-202ENST00000414120 DCAF12Q5T6F0 453 aa11.72□□□□□ -0.53
LINC00887-202ENST00000414120 PIP4P1Q86T03 277 aa11.72□□□□□ -0.53
LINC00887-202ENST00000414120 OOSP2Q86WS3 158 aa11.72□□□□□ -0.53
LINC00887-202ENST00000414120 OR5AN1Q8NGI8 311 aa11.72□□□□□ -0.53
LINC00887-202ENST00000414120 SMIM14Q96QK8 99 aa11.72□□□□□ -0.53
LINC00887-202ENST00000414120 ZNF665Q9H7R5 613 aa11.72□□□□□ -0.53
LINC00887-202ENST00000414120 PLXNB3Q9ULL4 1909 aa11.71□□□□□ -0.53
LINC00887-202ENST00000414120 ZNF737O75373 536 aa11.71□□□□□ -0.53
LINC00887-202ENST00000414120 ARL4DP49703 201 aa11.71□□□□□ -0.53
LINC00887-202ENST00000414120 CATR1Q13166 79 aa11.71□□□□□ -0.53
LINC00887-202ENST00000414120 ZNF146Q15072 292 aa11.71□□□□□ -0.53
LINC00887-202ENST00000414120 PRR30Q53SZ7 412 aaPredicted RBP11.71□□□□□ -0.53
LINC00887-202ENST00000414120 SLC23A3Q6PIS1 610 aa11.71□□□□□ -0.53
LINC00887-202ENST00000414120 PIANPQ8IYJ0 282 aa11.71□□□□□ -0.53
LINC00887-202ENST00000414120 OR52E2Q8NGJ4 325 aa11.71□□□□□ -0.53
LINC00887-202ENST00000414120 OR13C6PQ8NH95 151 aa11.71□□□□□ -0.53
LINC00887-202ENST00000414120 RBM24Q9BX46 236 aaKnown RBP11.71□□□□□ -0.53
LINC00887-202ENST00000414120 EP300Q09472 2414 aaPredicted RBP11.71□□□□□ -0.53
LINC00887-202ENST00000414120 MUC6Q6W4X9 2439 aa11.71□□□□□ -0.53
LINC00887-202ENST00000414120 SLC31A1O15431 190 aa11.71□□□□□ -0.54
LINC00887-202ENST00000414120 MFAP5Q13361 173 aa11.71□□□□□ -0.54
LINC00887-202ENST00000414120 IHHQ14623 411 aa11.71□□□□□ -0.54
LINC00887-202ENST00000414120 CLEC12BQ2HXU8 276 aa11.71□□□□□ -0.54
LINC00887-202ENST00000414120 Q6AWC8 147 aa11.71□□□□□ -0.54
LINC00887-202ENST00000414120 OR1L1Q8NH94 360 aa11.71□□□□□ -0.54
LINC00887-202ENST00000414120 KCNS2Q9ULS6 477 aa11.71□□□□□ -0.54
LINC00887-202ENST00000414120 FRYLO94915 3013 aa11.71□□□□□ -0.54
LINC00887-202ENST00000414120 A0A1W2PP55 124 aa11.7□□□□□ -0.54
LINC00887-202ENST00000414120 CDKN3Q16667 212 aa11.7□□□□□ -0.54
LINC00887-202ENST00000414120 ABHD17CQ6PCB6 329 aa11.7□□□□□ -0.54
LINC00887-202ENST00000414120 HAPLN4Q86UW8 402 aa11.7□□□□□ -0.54
LINC00887-202ENST00000414120 OR1L3Q8NH93 324 aa11.7□□□□□ -0.54
LINC00887-202ENST00000414120 ZNRF4Q8WWF5 429 aa11.7□□□□□ -0.54
LINC00887-202ENST00000414120 KLRF1Q9NZS2 232 aa11.7□□□□□ -0.54
LINC00887-202ENST00000414120 A0A1W2PQF6 199 aa11.7□□□□□ -0.54
LINC00887-202ENST00000414120 C1orf100Q5SVJ3 147 aa11.7□□□□□ -0.54
LINC00887-202ENST00000414120 Q6Q795 121 aa11.7□□□□□ -0.54
LINC00887-202ENST00000414120 ZNF835Q9Y2P0 537 aa11.7□□□□□ -0.54
LINC00887-202ENST00000414120 RIF1Q5UIP0 2472 aaKnown RBP11.7□□□□□ -0.54
LINC00887-202ENST00000414120 MYO15AQ9UKN7 3530 aa11.7□□□□□ -0.54
LINC00887-202ENST00000414120 UPK3BL1B0FP48 263 aa11.69□□□□□ -0.54
LINC00887-202ENST00000414120 UPK3BL2E5RIL1 263 aa11.69□□□□□ -0.54
LINC00887-202ENST00000414120 C3orf80F5H4A9 247 aa11.69□□□□□ -0.54
LINC00887-202ENST00000414120 PMCHP20382 165 aa11.69□□□□□ -0.54
LINC00887-202ENST00000414120 CXCL12P48061 93 aa11.69□□□□□ -0.54
LINC00887-202ENST00000414120 PSG7Q13046 419 aa11.69□□□□□ -0.54
LINC00887-202ENST00000414120 ATOH7Q8N100 152 aa11.69□□□□□ -0.54
LINC00887-202ENST00000414120 TSKUQ8WUA8 353 aa11.69□□□□□ -0.54
LINC00887-202ENST00000414120 MAP1LC3AQ9H492 121 aa11.69□□□□□ -0.54
LINC00887-202ENST00000414120 PTPRZ1P23471 2315 aaPredicted RBP11.69□□□□□ -0.54
LINC00887-202ENST00000414120 TRGV10A0A0A0MS01 117 aa11.69□□□□□ -0.54
LINC00887-202ENST00000414120 F5H768 121 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms