RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 NR2C2APQ86WQ0 139 aa17.17■□□□□ 0.34
MSH6-202ENST00000411819 PHB2Q99623 299 aa17.17■□□□□ 0.34
MSH6-202ENST00000411819 RSRP1Q9BUV0 290 aa17.17■□□□□ 0.34
MSH6-202ENST00000411819 ANKRD34BA5PLL1 514 aa17.16■□□□□ 0.34
MSH6-202ENST00000411819 J3QRK9 145 aa17.16■□□□□ 0.34
MSH6-202ENST00000411819 CRYGBP07316 175 aa17.16■□□□□ 0.34
MSH6-202ENST00000411819 APELAP0DMC3 54 aa17.16■□□□□ 0.34
MSH6-202ENST00000411819 RRASP10301 218 aa17.16■□□□□ 0.34
MSH6-202ENST00000411819 ARL6IP1Q15041 203 aa17.16■□□□□ 0.34
MSH6-202ENST00000411819 H1FOOQ8IZA3 346 aaPredicted RBP17.16■□□□□ 0.34
MSH6-202ENST00000411819 ADTRPQ96IZ2 230 aa17.16■□□□□ 0.34
MSH6-202ENST00000411819 CENPOQ9BU64 300 aa17.16■□□□□ 0.34
MSH6-202ENST00000411819 ELOVL1Q9BW60 279 aa17.16■□□□□ 0.34
MSH6-202ENST00000411819 RANGRFQ9HD47 186 aaPredicted RBP17.16■□□□□ 0.34
MSH6-202ENST00000411819 COA4Q9NYJ1 87 aa17.16■□□□□ 0.34
MSH6-202ENST00000411819 IGKV1D-8A0A087WSZ0 117 aa17.15■□□□□ 0.34
MSH6-202ENST00000411819 A0A0G2JLM5 398 aa17.15■□□□□ 0.34
MSH6-202ENST00000411819 CRYZL1O95825 349 aa17.15■□□□□ 0.34
MSH6-202ENST00000411819 DTYMKP23919 212 aa17.15■□□□□ 0.34
MSH6-202ENST00000411819 DUTP33316 252 aaKnown RBP17.15■□□□□ 0.34
MSH6-202ENST00000411819 TNXAQ16473 311 aa17.15■□□□□ 0.34
MSH6-202ENST00000411819 SRSF7Q16629 238 aaKnown RBP eCLIP17.15■□□□□ 0.34
MSH6-202ENST00000411819 VMA21Q3ZAQ7 101 aa17.15■□□□□ 0.34
MSH6-202ENST00000411819 UBE2UQ5VVX9 321 aa17.15■□□□□ 0.34
MSH6-202ENST00000411819 OVCH2Q7RTZ1 564 aa17.15■□□□□ 0.34
MSH6-202ENST00000411819 TMEM68Q96MH6 324 aa17.15■□□□□ 0.34
MSH6-202ENST00000411819 STUB1Q9UNE7 303 aa17.15■□□□□ 0.34
MSH6-202ENST00000411819 NBEAL2Q6ZNJ1 2754 aa17.15■□□□□ 0.34
MSH6-202ENST00000411819 SRRM4A7MD48 611 aaKnown RBP17.14■□□□□ 0.33
MSH6-202ENST00000411819 NOTOA8MTQ0 251 aa17.14■□□□□ 0.33
MSH6-202ENST00000411819 MRPS14O60783 128 aaKnown RBP17.14■□□□□ 0.33
MSH6-202ENST00000411819 ZP3P21754 424 aa17.14■□□□□ 0.33
MSH6-202ENST00000411819 CDNFQ49AH0 187 aa17.14■□□□□ 0.33
MSH6-202ENST00000411819 IDO2Q6ZQW0 420 aa17.14■□□□□ 0.33
MSH6-202ENST00000411819 Q6ZS49 121 aa17.14■□□□□ 0.33
MSH6-202ENST00000411819 ST6GALNAC5Q9BVH7 336 aa17.14■□□□□ 0.33
MSH6-202ENST00000411819 TXNL4BQ9NX01 149 aaKnown RBP17.14■□□□□ 0.33
MSH6-202ENST00000411819 TRIM64CA6NLI5 447 aa17.13■□□□□ 0.33
MSH6-202ENST00000411819 LINC00473A8K010 186 aa17.13■□□□□ 0.33
MSH6-202ENST00000411819 MPPED1O15442 326 aa17.13■□□□□ 0.33
MSH6-202ENST00000411819 ANKRD13BQ86YJ7 626 aa17.13■□□□□ 0.33
MSH6-202ENST00000411819 SBSPONQ8IVN8 264 aa17.13■□□□□ 0.33
MSH6-202ENST00000411819 SPARTQ8N0X7 666 aa17.13■□□□□ 0.33
MSH6-202ENST00000411819 ACOT12Q8WYK0 555 aa17.13■□□□□ 0.33
MSH6-202ENST00000411819 DDB2Q92466 427 aa17.13■□□□□ 0.33
MSH6-202ENST00000411819 TINAGL1Q9GZM7 467 aaPredicted RBP17.13■□□□□ 0.33
MSH6-202ENST00000411819 DAPK2Q9UIK4 370 aa17.13■□□□□ 0.33
MSH6-202ENST00000411819 FRMD6-AS1P0C7T7 363 aa17.12■□□□□ 0.33
MSH6-202ENST00000411819 UBE2KP61086 200 aa17.12■□□□□ 0.33
MSH6-202ENST00000411819 NUDCD2Q8WVJ2 157 aa17.12■□□□□ 0.33
MSH6-202ENST00000411819 FCGR1BQ92637 280 aa17.12■□□□□ 0.33
MSH6-202ENST00000411819 Q9H521 79 aa17.12■□□□□ 0.33
MSH6-202ENST00000411819 MSGN1A6NI15 193 aa17.11■□□□□ 0.33
MSH6-202ENST00000411819 ATP6V1G2O95670 118 aa17.11■□□□□ 0.33
MSH6-202ENST00000411819 AADACP22760 399 aa17.11■□□□□ 0.33
MSH6-202ENST00000411819 NFYAP23511 347 aaPredicted RBP17.11■□□□□ 0.33
MSH6-202ENST00000411819 FGF9P31371 208 aaPredicted RBP17.11■□□□□ 0.33
MSH6-202ENST00000411819 GNG2P59768 71 aa17.11■□□□□ 0.33
MSH6-202ENST00000411819 PRSS8Q16651 343 aa17.11■□□□□ 0.33
MSH6-202ENST00000411819 HACD4Q5VWC8 232 aa17.11■□□□□ 0.33
MSH6-202ENST00000411819 KCTD9Q7L273 389 aa17.11■□□□□ 0.33
MSH6-202ENST00000411819 ZNF645Q8N7E2 425 aa17.11■□□□□ 0.33
MSH6-202ENST00000411819 TEX45Q8NA69 505 aa17.11■□□□□ 0.33
MSH6-202ENST00000411819 OSR1Q8TAX0 266 aaPredicted RBP17.11■□□□□ 0.33
MSH6-202ENST00000411819 LGALS14Q8TCE9 139 aa17.11■□□□□ 0.33
MSH6-202ENST00000411819 SRSF12Q8WXF0 261 aaKnown RBP17.11■□□□□ 0.33
MSH6-202ENST00000411819 DCUN1D5Q9BTE7 237 aa17.11■□□□□ 0.33
MSH6-202ENST00000411819 SSR3Q9UNL2 185 aa17.11■□□□□ 0.33
MSH6-202ENST00000411819 RRP15Q9Y3B9 282 aaKnown RBP17.11■□□□□ 0.33
MSH6-202ENST00000411819 HUWE1Q7Z6Z7 4374 aaKnown RBP17.11■□□□□ 0.33
MSH6-202ENST00000411819 RYR3Q15413 4870 aa17.11■□□□□ 0.33
MSH6-202ENST00000411819 STAB2Q8WWQ8 2551 aa17.1■□□□□ 0.33
MSH6-202ENST00000411819 TMEM235A6NFC5 223 aa17.1■□□□□ 0.33
MSH6-202ENST00000411819 MRGPRG-AS1Q2M3A8 158 aa17.1■□□□□ 0.33
MSH6-202ENST00000411819 OR2B11Q5JQS5 317 aa17.1■□□□□ 0.33
MSH6-202ENST00000411819 RCHY1Q96PM5 261 aa17.1■□□□□ 0.33
MSH6-202ENST00000411819 OR2W1Q9Y3N9 320 aa17.1■□□□□ 0.33
MSH6-202ENST00000411819 TNCP24821 2201 aa17.1■□□□□ 0.33
MSH6-202ENST00000411819 FCGR3BO75015 233 aa17.09■□□□□ 0.33
MSH6-202ENST00000411819 TUSC2O75896 110 aa17.09■□□□□ 0.33
MSH6-202ENST00000411819 SCGNO76038 276 aa17.09■□□□□ 0.33
MSH6-202ENST00000411819 ACTL6BO94805 426 aa17.09■□□□□ 0.33
MSH6-202ENST00000411819 IGLV1-51P01701 117 aa17.09■□□□□ 0.33
MSH6-202ENST00000411819 CTXN2P0C2S0 81 aa17.09■□□□□ 0.33
MSH6-202ENST00000411819 SAA1P0DJI8 122 aaPredicted RBP17.09■□□□□ 0.33
MSH6-202ENST00000411819 CD36P16671 472 aa17.09■□□□□ 0.33
MSH6-202ENST00000411819 SYNJ2BPP57105 145 aa17.09■□□□□ 0.33
MSH6-202ENST00000411819 DYRK1AQ13627 763 aa17.09■□□□□ 0.33
MSH6-202ENST00000411819 SFXN4Q6P4A7 337 aa17.09■□□□□ 0.33
MSH6-202ENST00000411819 TPRA1Q86W33 373 aa17.09■□□□□ 0.33
MSH6-202ENST00000411819 DCSTAMPQ9H295 470 aa17.09■□□□□ 0.33
MSH6-202ENST00000411819 PEF1Q9UBV8 284 aaKnown RBP17.09■□□□□ 0.33
MSH6-202ENST00000411819 MRPS7Q9Y2R9 242 aaKnown RBP17.09■□□□□ 0.33
MSH6-202ENST00000411819 PRELID3BQ9Y3B1 194 aa17.09■□□□□ 0.33
MSH6-202ENST00000411819 CREBL2O60519 120 aaPredicted RBP17.08■□□□□ 0.32
MSH6-202ENST00000411819 TRBV12-3P01733 135 aa17.08■□□□□ 0.32
MSH6-202ENST00000411819 OR9G9P0C7N8 305 aa17.08■□□□□ 0.32
MSH6-202ENST00000411819 MXD1Q05195 221 aa17.08■□□□□ 0.32
MSH6-202ENST00000411819 CDK10Q15131 360 aa17.08■□□□□ 0.32
MSH6-202ENST00000411819 ADAD2Q8NCV1 583 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms