RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 FCN1O00602 326 aa17.62■□□□□ 0.41
PTCD3-203ENST00000409783 KCNAB3O43448 404 aa17.62■□□□□ 0.41
PTCD3-203ENST00000409783 GSTZ1O43708 216 aaPredicted RBP17.62■□□□□ 0.41
PTCD3-203ENST00000409783 CD74P04233 296 aa17.62■□□□□ 0.41
PTCD3-203ENST00000409783 CRYGBP07316 175 aa17.62■□□□□ 0.41
PTCD3-203ENST00000409783 LGALS7P47929 136 aa17.62■□□□□ 0.41
PTCD3-203ENST00000409783 TCTEX1D4Q5JR98 221 aa17.62■□□□□ 0.41
PTCD3-203ENST00000409783 LIN54Q6MZP7 749 aa17.62■□□□□ 0.41
PTCD3-203ENST00000409783 CENPVQ7Z7K6 275 aaPredicted RBP17.62■□□□□ 0.41
PTCD3-203ENST00000409783 CCDC190Q86UF4 302 aa17.62■□□□□ 0.41
PTCD3-203ENST00000409783 STPG2Q8N412 459 aa17.62■□□□□ 0.41
PTCD3-203ENST00000409783 TMEM229BQ8NBD8 167 aa17.62■□□□□ 0.41
PTCD3-203ENST00000409783 OR5AU1Q8NGC0 362 aa17.62■□□□□ 0.41
PTCD3-203ENST00000409783 ZNF580Q9UK33 172 aa17.62■□□□□ 0.41
PTCD3-203ENST00000409783 AP4M1O00189 453 aa17.61■□□□□ 0.41
PTCD3-203ENST00000409783 TNFSF12O43508 249 aa17.61■□□□□ 0.41
PTCD3-203ENST00000409783 FBXO24O75426 580 aa17.61■□□□□ 0.41
PTCD3-203ENST00000409783 TBPP20226 339 aa17.61■□□□□ 0.41
PTCD3-203ENST00000409783 AADACL3Q5VUY0 350 aa17.61■□□□□ 0.41
PTCD3-203ENST00000409783 FOXRED2Q8IWF2 684 aa17.61■□□□□ 0.41
PTCD3-203ENST00000409783 OR4D10Q8NGI6 311 aa17.61■□□□□ 0.41
PTCD3-203ENST00000409783 CHPT1Q8WUD6 406 aa17.61■□□□□ 0.41
PTCD3-203ENST00000409783 TPSG1Q9NRR2 321 aa17.61■□□□□ 0.41
PTCD3-203ENST00000409783 METTL1Q9UBP6 276 aaKnown RBP17.61■□□□□ 0.41
PTCD3-203ENST00000409783 SLC25A17O43808 307 aa17.6■□□□□ 0.41
PTCD3-203ENST00000409783 FCGR3BO75015 233 aa17.6■□□□□ 0.41
PTCD3-203ENST00000409783 CRYZL1O95825 349 aa17.6■□□□□ 0.41
PTCD3-203ENST00000409783 IGF1P05019 195 aa17.6■□□□□ 0.41
PTCD3-203ENST00000409783 TSPAN5P62079 268 aa17.6■□□□□ 0.41
PTCD3-203ENST00000409783 NDPQ00604 133 aa17.6■□□□□ 0.41
PTCD3-203ENST00000409783 CD83Q01151 205 aa17.6■□□□□ 0.41
PTCD3-203ENST00000409783 RNASE10Q5GAN6 216 aaKnown RBP17.6■□□□□ 0.41
PTCD3-203ENST00000409783 LHFPL1Q86WI0 220 aa17.6■□□□□ 0.41
PTCD3-203ENST00000409783 SGMS2Q8NHU3 365 aa17.6■□□□□ 0.41
PTCD3-203ENST00000409783 TCTEX1D2Q8WW35 142 aa17.6■□□□□ 0.41
PTCD3-203ENST00000409783 HARBI1Q96MB7 349 aa17.6■□□□□ 0.41
PTCD3-203ENST00000409783 OR51J1Q9H342 316 aa17.6■□□□□ 0.41
PTCD3-203ENST00000409783 PRELID3BQ9Y3B1 194 aa17.6■□□□□ 0.41
PTCD3-203ENST00000409783 PSMB11A5LHX3 300 aa17.59■□□□□ 0.41
PTCD3-203ENST00000409783 ADARB2-AS1A8MUL3 147 aa17.59■□□□□ 0.41
PTCD3-203ENST00000409783 SHOXO15266 292 aa17.59■□□□□ 0.41
PTCD3-203ENST00000409783 TAS2R19P59542 299 aa17.59■□□□□ 0.41
PTCD3-203ENST00000409783 CX3CL1P78423 397 aa17.59■□□□□ 0.41
PTCD3-203ENST00000409783 ZNF79Q15937 498 aa17.59■□□□□ 0.41
PTCD3-203ENST00000409783 MRGPRG-AS1Q2M3A8 158 aa17.59■□□□□ 0.41
PTCD3-203ENST00000409783 OR2B11Q5JQS5 317 aa17.59■□□□□ 0.41
PTCD3-203ENST00000409783 ZNF329Q86UD4 541 aa17.59■□□□□ 0.41
PTCD3-203ENST00000409783 OR6Q1Q8NGQ2 317 aa17.59■□□□□ 0.41
PTCD3-203ENST00000409783 OSR1Q8TAX0 266 aaPredicted RBP17.59■□□□□ 0.41
PTCD3-203ENST00000409783 CITED2Q99967 270 aaPredicted RBP17.59■□□□□ 0.41
PTCD3-203ENST00000409783 TNCP24821 2201 aa17.58■□□□□ 0.4
PTCD3-203ENST00000409783 A6NHS1 94 aa17.58■□□□□ 0.4
PTCD3-203ENST00000409783 ZNF735P0CB33 412 aa17.58■□□□□ 0.4
PTCD3-203ENST00000409783 S100A5P33763 92 aa17.58■□□□□ 0.4
PTCD3-203ENST00000409783 UCP3P55916 312 aa17.58■□□□□ 0.4
PTCD3-203ENST00000409783 SSBP2P81877 361 aaPredicted RBP17.58■□□□□ 0.4
PTCD3-203ENST00000409783 CFHR3Q02985 330 aa17.58■□□□□ 0.4
PTCD3-203ENST00000409783 CBX3Q13185 183 aa17.58■□□□□ 0.4
PTCD3-203ENST00000409783 STEAP1BQ6NZ63 245 aa17.58■□□□□ 0.4
PTCD3-203ENST00000409783 ARRDC1Q8N5I2 433 aa17.58■□□□□ 0.4
PTCD3-203ENST00000409783 FBXO7Q9Y3I1 522 aa17.58■□□□□ 0.4
PTCD3-203ENST00000409783 WNK1Q9H4A3 2382 aa17.58■□□□□ 0.4
PTCD3-203ENST00000409783 ATP6V0E1O15342 81 aa17.57■□□□□ 0.4
PTCD3-203ENST00000409783 RAB3DO95716 219 aa17.57■□□□□ 0.4
PTCD3-203ENST00000409783 EGR2P11161 476 aaPredicted RBP17.57■□□□□ 0.4
PTCD3-203ENST00000409783 ETV6P41212 452 aa17.57■□□□□ 0.4
PTCD3-203ENST00000409783 UBE2KP61086 200 aa17.57■□□□□ 0.4
PTCD3-203ENST00000409783 PLGLAQ15195 96 aa17.57■□□□□ 0.4
PTCD3-203ENST00000409783 PRR31Q5SQ13 230 aa17.57■□□□□ 0.4
PTCD3-203ENST00000409783 BORCS5Q969J3 196 aa17.57■□□□□ 0.4
PTCD3-203ENST00000409783 CLCC1Q96S66 551 aa17.57■□□□□ 0.4
PTCD3-203ENST00000409783 RSRP1Q9BUV0 290 aa17.57■□□□□ 0.4
PTCD3-203ENST00000409783 VWFP04275 2813 aa17.56■□□□□ 0.4
PTCD3-203ENST00000409783 ANKRD20A5PA0PJZ0 165 aa17.56■□□□□ 0.4
PTCD3-203ENST00000409783 GPR31O00270 319 aa17.56■□□□□ 0.4
PTCD3-203ENST00000409783 RAMP3O60896 148 aa17.56■□□□□ 0.4
PTCD3-203ENST00000409783 PGLYRP1O75594 196 aaPredicted RBP17.56■□□□□ 0.4
PTCD3-203ENST00000409783 CA2P00918 260 aa17.56■□□□□ 0.4
PTCD3-203ENST00000409783 CSF1P09603 554 aa17.56■□□□□ 0.4
PTCD3-203ENST00000409783 PTBP1P26599 531 aaKnown RBP eCLIP17.56■□□□□ 0.4
PTCD3-203ENST00000409783 CRIP2P52943 208 aaPredicted RBP17.56■□□□□ 0.4
PTCD3-203ENST00000409783 PJVKQ0ZLH3 352 aa17.56■□□□□ 0.4
PTCD3-203ENST00000409783 C19orf54Q5BKX5 351 aa17.56■□□□□ 0.4
PTCD3-203ENST00000409783 ZNF562Q6V9R5 426 aa17.56■□□□□ 0.4
PTCD3-203ENST00000409783 PPP1R27Q86WC6 154 aa17.56■□□□□ 0.4
PTCD3-203ENST00000409783 OR4S2Q8NH73 311 aa17.56■□□□□ 0.4
PTCD3-203ENST00000409783 ARPC1BO15143 372 aaKnown RBP17.55■□□□□ 0.4
PTCD3-203ENST00000409783 RBFOX2O43251 390 aaKnown RBP eCLIP17.55■□□□□ 0.4
PTCD3-203ENST00000409783 IFNA6P05013 189 aa17.55■□□□□ 0.4
PTCD3-203ENST00000409783 PPIFP30405 207 aaKnown RBP17.55■□□□□ 0.4
PTCD3-203ENST00000409783 KIR2DS2P43631 304 aa17.55■□□□□ 0.4
PTCD3-203ENST00000409783 CATR1Q13166 79 aa17.55■□□□□ 0.4
PTCD3-203ENST00000409783 FAAP20Q6NZ36 180 aa17.55■□□□□ 0.4
PTCD3-203ENST00000409783 TEX45Q8NA69 505 aa17.55■□□□□ 0.4
PTCD3-203ENST00000409783 TRIM63Q969Q1 353 aa17.55■□□□□ 0.4
PTCD3-203ENST00000409783 MRGPRFQ96AM1 343 aa17.55■□□□□ 0.4
PTCD3-203ENST00000409783 PARP11Q9NR21 331 aa17.55■□□□□ 0.4
PTCD3-203ENST00000409783 PKD1L1Q8TDX9 2849 aa17.55■□□□□ 0.4
PTCD3-203ENST00000409783 G3V318 75 aa17.54■□□□□ 0.4
PTCD3-203ENST00000409783 M0QZ24 198 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms