RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 H2BFWTQ7Z2G1 175 aa10.12□□□□□ -0.79
CHMP3-204ENST00000409727 TGIF2LXQ8IUE1 241 aa10.12□□□□□ -0.79
CHMP3-204ENST00000409727 FAM71E2Q8N5Q1 922 aa10.12□□□□□ -0.79
CHMP3-204ENST00000409727 OR4S2Q8NH73 311 aa10.12□□□□□ -0.79
CHMP3-204ENST00000409727 LSM10Q969L4 123 aaKnown RBP10.12□□□□□ -0.79
CHMP3-204ENST00000409727 ADTRPQ96IZ2 230 aa10.12□□□□□ -0.79
CHMP3-204ENST00000409727 SLC35D1Q9NTN3 355 aa10.12□□□□□ -0.79
CHMP3-204ENST00000409727 RCL1Q9Y2P8 373 aaKnown RBP10.12□□□□□ -0.79
CHMP3-204ENST00000409727 NSG2Q9Y328 171 aa10.12□□□□□ -0.79
CHMP3-204ENST00000409727 MMP24Q9Y5R2 645 aa10.12□□□□□ -0.79
CHMP3-204ENST00000409727 POLQO75417 2590 aa10.11□□□□□ -0.79
CHMP3-204ENST00000409727 HELZ2Q9BYK8 2649 aaKnown RBP10.11□□□□□ -0.79
CHMP3-204ENST00000409727 ASH1LQ9NR48 2969 aaKnown RBP10.11□□□□□ -0.79
CHMP3-204ENST00000409727 IGHV3-72A0A0B4J1Y9 119 aa10.11□□□□□ -0.79
CHMP3-204ENST00000409727 A0A1B0GU03 582 aa10.11□□□□□ -0.79
CHMP3-204ENST00000409727 ST8SIA3O43173 380 aa10.11□□□□□ -0.79
CHMP3-204ENST00000409727 SSSCA1O60232 199 aa10.11□□□□□ -0.79
CHMP3-204ENST00000409727 RBMXL2O75526 392 aaKnown RBP10.11□□□□□ -0.79
CHMP3-204ENST00000409727 DEDDO75618 318 aa10.11□□□□□ -0.79
CHMP3-204ENST00000409727 TOX4O94842 621 aa10.11□□□□□ -0.79
CHMP3-204ENST00000409727 RLN2P04090 185 aa10.11□□□□□ -0.79
CHMP3-204ENST00000409727 PRTN3P24158 256 aa10.11□□□□□ -0.79
CHMP3-204ENST00000409727 KIR2DS2P43631 304 aa10.11□□□□□ -0.79
CHMP3-204ENST00000409727 DSCR9P59020 149 aa10.11□□□□□ -0.79
CHMP3-204ENST00000409727 POLR2GP62487 172 aaKnown RBP eCLIP10.11□□□□□ -0.79
CHMP3-204ENST00000409727 RTL8BQ17RB0 113 aa10.11□□□□□ -0.79
CHMP3-204ENST00000409727 INO80EQ8NBZ0 244 aaPredicted RBP10.11□□□□□ -0.79
CHMP3-204ENST00000409727 OR4P4Q8NGL7 312 aa10.11□□□□□ -0.79
CHMP3-204ENST00000409727 TNFRSF14Q92956 283 aa10.11□□□□□ -0.79
CHMP3-204ENST00000409727 ST6GALNAC6Q969X2 333 aa10.11□□□□□ -0.79
CHMP3-204ENST00000409727 PLEKHA2Q9HB19 425 aa10.11□□□□□ -0.79
CHMP3-204ENST00000409727 TNFSF18Q9UNG2 199 aa10.11□□□□□ -0.79
CHMP3-204ENST00000409727 CENPEQ02224 2701 aa10.11□□□□□ -0.79
CHMP3-204ENST00000409727 ATG12O94817 140 aa10.1□□□□□ -0.79
CHMP3-204ENST00000409727 PAX6P26367 422 aa10.1□□□□□ -0.79
CHMP3-204ENST00000409727 DVL1P1P54792 670 aaPredicted RBP10.1□□□□□ -0.79
CHMP3-204ENST00000409727 OR2B8PP59922 312 aa10.1□□□□□ -0.79
CHMP3-204ENST00000409727 ERVK-16P61578 105 aa10.1□□□□□ -0.79
CHMP3-204ENST00000409727 TAGLNQ01995 201 aaKnown RBP10.1□□□□□ -0.79
CHMP3-204ENST00000409727 HCP5Q6MZN7 132 aa10.1□□□□□ -0.79
CHMP3-204ENST00000409727 KIR3DL3Q8N743 410 aa10.1□□□□□ -0.79
CHMP3-204ENST00000409727 BEND2Q8NDZ0 799 aa10.1□□□□□ -0.79
CHMP3-204ENST00000409727 ARL6Q9H0F7 186 aa10.1□□□□□ -0.79
CHMP3-204ENST00000409727 HEXA-AS1Q9H8Q6 139 aa10.1□□□□□ -0.79
CHMP3-204ENST00000409727 FAM212BQ9NTI7 297 aaPredicted RBP10.1□□□□□ -0.79
CHMP3-204ENST00000409727 KPTNQ9Y664 436 aa10.1□□□□□ -0.79
CHMP3-204ENST00000409727 POMT1Q9Y6A1 747 aa10.1□□□□□ -0.79
CHMP3-204ENST00000409727 VPS13CQ709C8 3753 aa10.1□□□□□ -0.79
CHMP3-204ENST00000409727 PTPN13Q12923 2485 aa10.1□□□□□ -0.79
CHMP3-204ENST00000409727 H0YJW9 148 aa10.1□□□□□ -0.79
CHMP3-204ENST00000409727 RBFOX2O43251 390 aaKnown RBP eCLIP10.1□□□□□ -0.79
CHMP3-204ENST00000409727 APOA2P02652 100 aa10.1□□□□□ -0.79
CHMP3-204ENST00000409727 NQO2P16083 231 aa10.1□□□□□ -0.79
CHMP3-204ENST00000409727 USF1P22415 310 aaPredicted RBP10.1□□□□□ -0.79
CHMP3-204ENST00000409727 TMEM65Q6PI78 240 aa10.1□□□□□ -0.79
CHMP3-204ENST00000409727 TMUB2Q71RG4 321 aa10.1□□□□□ -0.79
CHMP3-204ENST00000409727 MAPK1IP1LQ8NDC0 245 aa10.1□□□□□ -0.79
CHMP3-204ENST00000409727 RPEQ96AT9 228 aa10.1□□□□□ -0.79
CHMP3-204ENST00000409727 NABP2Q9BQ15 211 aa10.1□□□□□ -0.79
CHMP3-204ENST00000409727 SIRPDQ9H106 197 aa10.1□□□□□ -0.79
CHMP3-204ENST00000409727 ZC4H2Q9NQZ6 224 aa10.1□□□□□ -0.79
CHMP3-204ENST00000409727 BEX4Q9NWD9 120 aaPredicted RBP10.1□□□□□ -0.79
CHMP3-204ENST00000409727 HILPDAQ9Y5L2 63 aa10.1□□□□□ -0.79
CHMP3-204ENST00000409727 RNF222A6NCQ9 220 aa10.09□□□□□ -0.79
CHMP3-204ENST00000409727 MSGN1A6NI15 193 aa10.09□□□□□ -0.79
CHMP3-204ENST00000409727 RNASEK-C17orf49H0YIS7 233 aa10.09□□□□□ -0.79
CHMP3-204ENST00000409727 WRBO00258 174 aa10.09□□□□□ -0.79
CHMP3-204ENST00000409727 PITX3O75364 302 aa10.09□□□□□ -0.79
CHMP3-204ENST00000409727 OR9G9P0C7N8 305 aa10.09□□□□□ -0.79
CHMP3-204ENST00000409727 P0C879 139 aa10.09□□□□□ -0.79
CHMP3-204ENST00000409727 HOXB4P17483 251 aaPredicted RBP10.09□□□□□ -0.79
CHMP3-204ENST00000409727 ZNF137PP52743 207 aa10.09□□□□□ -0.79
CHMP3-204ENST00000409727 LDLRAD2Q5SZI1 272 aa10.09□□□□□ -0.79
CHMP3-204ENST00000409727 C1orf122Q6ZSJ8 110 aa10.09□□□□□ -0.79
CHMP3-204ENST00000409727 LHFPL4Q7Z7J7 247 aa10.09□□□□□ -0.79
CHMP3-204ENST00000409727 MOB3BQ86TA1 216 aa10.09□□□□□ -0.79
CHMP3-204ENST00000409727 LHX4Q969G2 390 aa10.09□□□□□ -0.79
CHMP3-204ENST00000409727 TMEM140Q9NV12 185 aa10.09□□□□□ -0.79
CHMP3-204ENST00000409727 AMMECR1Q9Y4X0 333 aaPredicted RBP10.09□□□□□ -0.79
CHMP3-204ENST00000409727 ABCA12Q86UK0 2595 aa10.09□□□□□ -0.79
CHMP3-204ENST00000409727 ANKRD17O75179 2603 aaKnown RBP10.09□□□□□ -0.79
CHMP3-204ENST00000409727 TRAV3A0A0B4J244 114 aa10.08□□□□□ -0.8
CHMP3-204ENST00000409727 SHOXO15266 292 aa10.08□□□□□ -0.8
CHMP3-204ENST00000409727 SLC25A6P12236 298 aa10.08□□□□□ -0.8
CHMP3-204ENST00000409727 MMP9P14780 707 aa10.08□□□□□ -0.8
CHMP3-204ENST00000409727 SLC25A16P16260 332 aa10.08□□□□□ -0.8
CHMP3-204ENST00000409727 HTR1DP28221 377 aa10.08□□□□□ -0.8
CHMP3-204ENST00000409727 NUP62P37198 522 aaPredicted RBP10.08□□□□□ -0.8
CHMP3-204ENST00000409727 IFITM2Q01629 132 aa10.08□□□□□ -0.8
CHMP3-204ENST00000409727 ID3Q02535 119 aa10.08□□□□□ -0.8
CHMP3-204ENST00000409727 OPCMLQ14982 345 aa10.08□□□□□ -0.8
CHMP3-204ENST00000409727 SPINK9Q5DT21 86 aa10.08□□□□□ -0.8
CHMP3-204ENST00000409727 Q5PR19 223 aa10.08□□□□□ -0.8
CHMP3-204ENST00000409727 FAM71F2Q6NXP2 309 aa10.08□□□□□ -0.8
CHMP3-204ENST00000409727 CLEC9AQ6UXN8 241 aa10.08□□□□□ -0.8
CHMP3-204ENST00000409727 ACOT7LQ6ZUV0 252 aa10.08□□□□□ -0.8
CHMP3-204ENST00000409727 OR11H6Q8NGC7 330 aa10.08□□□□□ -0.8
CHMP3-204ENST00000409727 OR5AN1Q8NGI8 311 aa10.08□□□□□ -0.8
CHMP3-204ENST00000409727 RHOVQ96L33 236 aa10.08□□□□□ -0.8
CHMP3-204ENST00000409727 TBX15Q96SF7 602 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms