RNA–Protein interactions for RNA: ENST00000405375.5

CDKN1A-203, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-203ENST00000405375 Q8TCH9 128 aa13.46□□□□□ -0.26
CDKN1A-203ENST00000405375 P2RX4Q99571 388 aa13.46□□□□□ -0.26
CDKN1A-203ENST00000405375 RP1L1Q8IWN7 2480 aaPredicted RBP13.45□□□□□ -0.26
CDKN1A-203ENST00000405375 ICE1Q9Y2F5 2266 aa13.45□□□□□ -0.26
CDKN1A-203ENST00000405375 HCFC1P51610 2035 aa13.45□□□□□ -0.26
CDKN1A-203ENST00000405375 DCHS1Q96JQ0 3298 aa13.45□□□□□ -0.26
CDKN1A-203ENST00000405375 FAM90A9PA6NNJ1 464 aa13.45□□□□□ -0.26
CDKN1A-203ENST00000405375 CEBPZOSA8MTT3 80 aa13.45□□□□□ -0.26
CDKN1A-203ENST00000405375 FCGR3BO75015 233 aa13.45□□□□□ -0.26
CDKN1A-203ENST00000405375 NBL1P41271 181 aa13.45□□□□□ -0.26
CDKN1A-203ENST00000405375 GNB2P62879 340 aa13.45□□□□□ -0.26
CDKN1A-203ENST00000405375 C1QL4Q86Z23 238 aa13.45□□□□□ -0.26
CDKN1A-203ENST00000405375 FAM222BQ8WU58 562 aa13.45□□□□□ -0.26
CDKN1A-203ENST00000405375 QTRT1Q9BXR0 403 aaKnown RBP13.45□□□□□ -0.26
CDKN1A-203ENST00000405375 NCOR1P1Q9H4R4 102 aa13.45□□□□□ -0.26
CDKN1A-203ENST00000405375 VAX2Q9UIW0 290 aa13.45□□□□□ -0.26
CDKN1A-203ENST00000405375 C15orf62A8K5M9 175 aa13.44□□□□□ -0.26
CDKN1A-203ENST00000405375 UBE2CO00762 179 aa13.44□□□□□ -0.26
CDKN1A-203ENST00000405375 RBFOX2O43251 390 aaKnown RBP eCLIP13.44□□□□□ -0.26
CDKN1A-203ENST00000405375 EIF3GO75821 320 aaKnown RBP eCLIP13.44□□□□□ -0.26
CDKN1A-203ENST00000405375 PLA2G5P39877 138 aa13.44□□□□□ -0.26
CDKN1A-203ENST00000405375 EDDM3BP56851 147 aa13.44□□□□□ -0.26
CDKN1A-203ENST00000405375 HNF4GQ14541 408 aa13.44□□□□□ -0.26
CDKN1A-203ENST00000405375 RPL39P5Q59GN2 51 aa13.44□□□□□ -0.26
CDKN1A-203ENST00000405375 FAM201AQ5SY85 155 aa13.44□□□□□ -0.26
CDKN1A-203ENST00000405375 LHX4Q969G2 390 aa13.44□□□□□ -0.26
CDKN1A-203ENST00000405375 SLC39A9Q9NUM3 307 aa13.44□□□□□ -0.26
CDKN1A-203ENST00000405375 CALYQ9NYX4 217 aa13.44□□□□□ -0.26
CDKN1A-203ENST00000405375 OR6C3Q9NZP0 311 aa13.44□□□□□ -0.26
CDKN1A-203ENST00000405375 DSCAML1Q8TD84 2053 aa13.44□□□□□ -0.26
CDKN1A-203ENST00000405375 CXorf65A6NEN9 183 aa13.44□□□□□ -0.26
CDKN1A-203ENST00000405375 A8MXE2 369 aa13.44□□□□□ -0.26
CDKN1A-203ENST00000405375 M0R1X1 148 aa13.44□□□□□ -0.26
CDKN1A-203ENST00000405375 SELLP14151 372 aa13.44□□□□□ -0.26
CDKN1A-203ENST00000405375 FGF7P21781 194 aa13.44□□□□□ -0.26
CDKN1A-203ENST00000405375 OR2B8PP59922 312 aa13.44□□□□□ -0.26
CDKN1A-203ENST00000405375 TFF3Q07654 80 aa13.44□□□□□ -0.26
CDKN1A-203ENST00000405375 FAM27E3Q08E93 113 aa13.44□□□□□ -0.26
CDKN1A-203ENST00000405375 ELOBQ15370 118 aa13.44□□□□□ -0.26
CDKN1A-203ENST00000405375 UTF1Q5T230 341 aa13.44□□□□□ -0.26
CDKN1A-203ENST00000405375 FAM57AQ8TBR7 257 aa13.44□□□□□ -0.26
CDKN1A-203ENST00000405375 NPCDR1Q9BY65 106 aa13.44□□□□□ -0.26
CDKN1A-203ENST00000405375 SIRT7Q9NRC8 400 aa13.44□□□□□ -0.26
CDKN1A-203ENST00000405375 B4DEV8 164 aa13.43□□□□□ -0.26
CDKN1A-203ENST00000405375 IGHV2-5P01817 119 aa13.43□□□□□ -0.26
CDKN1A-203ENST00000405375 S100A6P06703 90 aa13.43□□□□□ -0.26
CDKN1A-203ENST00000405375 RPS16P62249 146 aaKnown RBP13.43□□□□□ -0.26
CDKN1A-203ENST00000405375 AKAP13Q12802 2813 aa13.43□□□□□ -0.26
CDKN1A-203ENST00000405375 KRTCAP3Q53RY4 240 aa13.43□□□□□ -0.26
CDKN1A-203ENST00000405375 C12orf57Q99622 126 aa13.43□□□□□ -0.26
CDKN1A-203ENST00000405375 LRFN3Q9BTN0 628 aa13.43□□□□□ -0.26
CDKN1A-203ENST00000405375 GCM1Q9NP62 436 aa13.43□□□□□ -0.26
CDKN1A-203ENST00000405375 ITGB1BP1O14713 200 aa13.43□□□□□ -0.26
CDKN1A-203ENST00000405375 KLK10O43240 276 aa13.43□□□□□ -0.26
CDKN1A-203ENST00000405375 IGHV3-7P01780 117 aa13.43□□□□□ -0.26
CDKN1A-203ENST00000405375 MBP02144 154 aa13.43□□□□□ -0.26
CDKN1A-203ENST00000405375 ERVFRD-1P60508 538 aa13.43□□□□□ -0.26
CDKN1A-203ENST00000405375 PNRC1Q12796 327 aaPredicted RBP13.43□□□□□ -0.26
CDKN1A-203ENST00000405375 C17orf58Q2M2W7 97 aa13.43□□□□□ -0.26
CDKN1A-203ENST00000405375 C1orf229Q6ZS94 237 aaPredicted RBP13.43□□□□□ -0.26
CDKN1A-203ENST00000405375 Q8WTZ3 238 aa13.43□□□□□ -0.26
CDKN1A-203ENST00000405375 DDB2Q92466 427 aa13.43□□□□□ -0.26
CDKN1A-203ENST00000405375 MAP1BP46821 2468 aaKnown RBP13.43□□□□□ -0.26
CDKN1A-203ENST00000405375 CEP250Q9BV73 2442 aa13.42□□□□□ -0.26
CDKN1A-203ENST00000405375 CTXND1A0A1B0GTU2 59 aa13.42□□□□□ -0.26
CDKN1A-203ENST00000405375 SLC31A2O15432 143 aa13.42□□□□□ -0.26
CDKN1A-203ENST00000405375 IFNA1P01562 189 aa13.42□□□□□ -0.26
CDKN1A-203ENST00000405375 ZNF343Q6P1L6 599 aa13.42□□□□□ -0.26
CDKN1A-203ENST00000405375 FAM180AQ6UWF9 173 aa13.42□□□□□ -0.26
CDKN1A-203ENST00000405375 Q8N7P7 452 aa13.42□□□□□ -0.26
CDKN1A-203ENST00000405375 SDSLQ96GA7 329 aa13.42□□□□□ -0.26
CDKN1A-203ENST00000405375 SLC25A22Q9H936 323 aa13.42□□□□□ -0.26
CDKN1A-203ENST00000405375 RNF7Q9UBF6 113 aa13.42□□□□□ -0.26
CDKN1A-203ENST00000405375 METTL1Q9UBP6 276 aaKnown RBP13.42□□□□□ -0.26
CDKN1A-203ENST00000405375 GAB2Q9UQC2 676 aa13.42□□□□□ -0.26
CDKN1A-203ENST00000405375 MUC6Q6W4X9 2439 aa13.42□□□□□ -0.26
CDKN1A-203ENST00000405375 IGHV1-46P01743 117 aa13.42□□□□□ -0.26
CDKN1A-203ENST00000405375 CD40P25942 277 aa13.42□□□□□ -0.26
CDKN1A-203ENST00000405375 CCKARP32238 428 aa13.42□□□□□ -0.26
CDKN1A-203ENST00000405375 MEOX2P50222 304 aa13.42□□□□□ -0.26
CDKN1A-203ENST00000405375 CD81P60033 236 aa13.42□□□□□ -0.26
CDKN1A-203ENST00000405375 PDLIM3Q53GG5 364 aaPredicted RBP13.42□□□□□ -0.26
CDKN1A-203ENST00000405375 STUMQ69YW2 141 aa13.42□□□□□ -0.26
CDKN1A-203ENST00000405375 DUX4L9Q6RFH8 374 aaPredicted RBP13.42□□□□□ -0.26
CDKN1A-203ENST00000405375 OR10G9Q8NGN4 311 aa13.42□□□□□ -0.26
CDKN1A-203ENST00000405375 OR10G7Q8NGN6 311 aa13.42□□□□□ -0.26
CDKN1A-203ENST00000405375 OR52E5Q8NH55 327 aa13.42□□□□□ -0.26
CDKN1A-203ENST00000405375 SDF2L1Q9HCN8 221 aa13.42□□□□□ -0.26
CDKN1A-203ENST00000405375 IL19Q9UHD0 177 aa13.42□□□□□ -0.26
CDKN1A-203ENST00000405375 LY86O95711 162 aa13.41□□□□□ -0.26
CDKN1A-203ENST00000405375 CXCL1P09341 107 aa13.41□□□□□ -0.26
CDKN1A-203ENST00000405375 SPCS3P61009 180 aa13.41□□□□□ -0.26
CDKN1A-203ENST00000405375 FFAR4Q5NUL3 377 aa13.41□□□□□ -0.26
CDKN1A-203ENST00000405375 PRAMEF5Q5TYX0 476 aa13.41□□□□□ -0.26
CDKN1A-203ENST00000405375 WDR25Q64LD2 544 aaPredicted RBP13.41□□□□□ -0.26
CDKN1A-203ENST00000405375 RBMS3Q6XE24 437 aaKnown RBP13.41□□□□□ -0.26
CDKN1A-203ENST00000405375 SSX9Q7RTT3 188 aa13.41□□□□□ -0.26
CDKN1A-203ENST00000405375 VKORC1L1Q8N0U8 176 aa13.41□□□□□ -0.26
CDKN1A-203ENST00000405375 FAM234AQ9H0X4 552 aa13.41□□□□□ -0.26
CDKN1A-203ENST00000405375 CUL9Q8IWT3 2517 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms