RNA–Protein interactions for RNA: ENST00000401979.6

FAM49B-201, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM49B, Length 2,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-201ENST00000401979 ODF3BA8MYP8 253 aa12.68□□□□□ -0.38
FAM49B-201ENST00000401979 RBFOX2O43251 390 aaKnown RBP eCLIP12.68□□□□□ -0.381e-6■■■■□ 26.4
FAM49B-201ENST00000401979 CRYZL1O95825 349 aa12.68□□□□□ -0.38
FAM49B-201ENST00000401979 HPRT1P00492 218 aa12.68□□□□□ -0.38
FAM49B-201ENST00000401979 TGFAP01135 160 aa12.68□□□□□ -0.38
FAM49B-201ENST00000401979 IGKV1-39P01597 117 aa12.68□□□□□ -0.38
FAM49B-201ENST00000401979 IGKV1D-39P04432 117 aa12.68□□□□□ -0.38
FAM49B-201ENST00000401979 EPHA1P21709 976 aa12.68□□□□□ -0.38
FAM49B-201ENST00000401979 UBE2E1P51965 193 aa12.68□□□□□ -0.38
FAM49B-201ENST00000401979 LRRC37A5PQ49AS3 106 aa12.68□□□□□ -0.38
FAM49B-201ENST00000401979 THOC7Q6I9Y2 204 aaKnown RBP12.68□□□□□ -0.38
FAM49B-201ENST00000401979 C1orf159Q96HA4 380 aa12.68□□□□□ -0.38
FAM49B-201ENST00000401979 C2orf50Q96LR7 162 aa12.68□□□□□ -0.38
FAM49B-201ENST00000401979 RANBP3Q9H6Z4 567 aaPredicted RBP12.68□□□□□ -0.38
FAM49B-201ENST00000401979 ZANQ9Y493 2812 aa12.68□□□□□ -0.38
FAM49B-201ENST00000401979 TXNL1O43396 289 aa12.67□□□□□ -0.38
FAM49B-201ENST00000401979 G6PCP35575 357 aa12.67□□□□□ -0.38
FAM49B-201ENST00000401979 TAGLNQ01995 201 aaKnown RBP12.67□□□□□ -0.38
FAM49B-201ENST00000401979 TMEM249Q2WGJ8 235 aa12.67□□□□□ -0.38
FAM49B-201ENST00000401979 MOB3BQ86TA1 216 aa12.67□□□□□ -0.38
FAM49B-201ENST00000401979 WDR89Q96FK6 387 aaPredicted RBP12.67□□□□□ -0.38
FAM49B-201ENST00000401979 SPIN2AQ99865 258 aa12.67□□□□□ -0.38
FAM49B-201ENST00000401979 SPIN2BQ9BPZ2 258 aa12.67□□□□□ -0.38
FAM49B-201ENST00000401979 PLEKHA2Q9HB19 425 aa12.67□□□□□ -0.38
FAM49B-201ENST00000401979 HILPDAQ9Y5L2 63 aa12.67□□□□□ -0.38
FAM49B-201ENST00000401979 ERVK-16P61578 105 aa12.67□□□□□ -0.38
FAM49B-201ENST00000401979 TPTE2P1Q5T6R2 138 aa12.67□□□□□ -0.38
FAM49B-201ENST00000401979 DMBX1Q8NFW5 382 aa12.67□□□□□ -0.38
FAM49B-201ENST00000401979 NABP2Q9BQ15 211 aa12.67□□□□□ -0.38
FAM49B-201ENST00000401979 NMES1Q9C002 83 aa12.67□□□□□ -0.38
FAM49B-201ENST00000401979 SVEP1Q4LDE5 3571 aa12.66□□□□□ -0.38
FAM49B-201ENST00000401979 CR1P17927 2039 aa12.66□□□□□ -0.38
FAM49B-201ENST00000401979 MARCH11A6NNE9 402 aa12.66□□□□□ -0.38
FAM49B-201ENST00000401979 RRASP10301 218 aa12.66□□□□□ -0.38
FAM49B-201ENST00000401979 GZMKP49863 264 aa12.66□□□□□ -0.38
FAM49B-201ENST00000401979 RAB13P51153 203 aa12.66□□□□□ -0.38
FAM49B-201ENST00000401979 DHRS7BQ6IAN0 325 aaPredicted RBP12.66□□□□□ -0.38
FAM49B-201ENST00000401979 LHFPL4Q7Z7J7 247 aa12.66□□□□□ -0.38
FAM49B-201ENST00000401979 OR5AN1Q8NGI8 311 aa12.66□□□□□ -0.38
FAM49B-201ENST00000401979 R3HDM4Q96D70 268 aa12.66□□□□□ -0.38
FAM49B-201ENST00000401979 FLNAP21333 2647 aaKnown RBP12.66□□□□□ -0.38
FAM49B-201ENST00000401979 IGHV1-3A0A0C4DH29 117 aa12.66□□□□□ -0.38
FAM49B-201ENST00000401979 H0YJW9 148 aa12.66□□□□□ -0.38
FAM49B-201ENST00000401979 SCGB1D2O95969 90 aa12.66□□□□□ -0.38
FAM49B-201ENST00000401979 IGKV1-5P01602 117 aa12.66□□□□□ -0.38
FAM49B-201ENST00000401979 IGKV1-16P04430 117 aa12.66□□□□□ -0.38
FAM49B-201ENST00000401979 IGHV4-31P0DP07 118 aa12.66□□□□□ -0.38
FAM49B-201ENST00000401979 NQO2P16083 231 aa12.66□□□□□ -0.38
FAM49B-201ENST00000401979 MC5RP33032 325 aa12.66□□□□□ -0.38
FAM49B-201ENST00000401979 EIF2B2P49770 351 aaKnown RBP12.66□□□□□ -0.38
FAM49B-201ENST00000401979 NMSQ5H8A3 153 aa12.66□□□□□ -0.38
FAM49B-201ENST00000401979 MINOS1Q5TGZ0 78 aa12.66□□□□□ -0.38
FAM49B-201ENST00000401979 SSX9Q7RTT3 188 aa12.66□□□□□ -0.38
FAM49B-201ENST00000401979 H2BFWTQ7Z2G1 175 aa12.66□□□□□ -0.38
FAM49B-201ENST00000401979 PPP1R1CQ8WVI7 109 aa12.66□□□□□ -0.38
FAM49B-201ENST00000401979 LSM10Q969L4 123 aaKnown RBP12.66□□□□□ -0.38
FAM49B-201ENST00000401979 WASHC3Q9Y3C0 194 aa12.66□□□□□ -0.38
FAM49B-201ENST00000401979 MINOS1-NBL1R4GNA1 71 aa12.66□□□□□ -0.38
FAM49B-201ENST00000401979 IGHV3-72A0A0B4J1Y9 119 aa12.65□□□□□ -0.38
FAM49B-201ENST00000401979 LY6LH3BQJ8 138 aa12.65□□□□□ -0.38
FAM49B-201ENST00000401979 C1QBP02746 253 aa12.65□□□□□ -0.38
FAM49B-201ENST00000401979 S100A10P60903 97 aa12.65□□□□□ -0.38
FAM49B-201ENST00000401979 FGL1Q08830 312 aa12.65□□□□□ -0.38
FAM49B-201ENST00000401979 SSX2Q16385 188 aa12.65□□□□□ -0.38
FAM49B-201ENST00000401979 GPR157Q5UAW9 335 aa12.65□□□□□ -0.38
FAM49B-201ENST00000401979 ZBTB8BQ8NAP8 495 aaPredicted RBP12.65□□□□□ -0.38
FAM49B-201ENST00000401979 ITGB1BP2Q9UKP3 347 aa12.65□□□□□ -0.38
FAM49B-201ENST00000401979 TBL2Q9Y4P3 447 aaKnown RBP12.65□□□□□ -0.38
FAM49B-201ENST00000401979 MMP24Q9Y5R2 645 aa12.65□□□□□ -0.38
FAM49B-201ENST00000401979 FLNBO75369 2602 aaKnown RBP12.65□□□□□ -0.38
FAM49B-201ENST00000401979 IGHV3OR16-10A0A075B7F0 116 aa12.64□□□□□ -0.39
FAM49B-201ENST00000401979 TRAV40A0A0B4J280 105 aa12.64□□□□□ -0.39
FAM49B-201ENST00000401979 CENPVL3A0A0U1RRI6 287 aa12.64□□□□□ -0.39
FAM49B-201ENST00000401979 SHOXO15266 292 aa12.64□□□□□ -0.39
FAM49B-201ENST00000401979 RBMXL2O75526 392 aaKnown RBP12.64□□□□□ -0.39
FAM49B-201ENST00000401979 HRASP01112 189 aa12.64□□□□□ -0.39
FAM49B-201ENST00000401979 SRSF4Q08170 494 aaKnown RBP12.64□□□□□ -0.39
FAM49B-201ENST00000401979 IZUMO4Q1ZYL8 232 aa12.64□□□□□ -0.39
FAM49B-201ENST00000401979 CCDC144NLQ6NUI1 221 aa12.64□□□□□ -0.39
FAM49B-201ENST00000401979 PDPNQ86YL7 162 aa12.64□□□□□ -0.39
FAM49B-201ENST00000401979 FAM219AQ8IW50 185 aa12.64□□□□□ -0.39
FAM49B-201ENST00000401979 FOXRED2Q8IWF2 684 aa12.64□□□□□ -0.39
FAM49B-201ENST00000401979 VKORC1L1Q8N0U8 176 aa12.64□□□□□ -0.39
FAM49B-201ENST00000401979 OR1S1Q8NH92 325 aa12.64□□□□□ -0.39
FAM49B-201ENST00000401979 GPR146Q96CH1 333 aa12.64□□□□□ -0.39
FAM49B-201ENST00000401979 FLYWCH2Q96CP2 140 aaKnown RBP12.64□□□□□ -0.39
FAM49B-201ENST00000401979 A0A0G2JRQ6 117 aa12.64□□□□□ -0.39
FAM49B-201ENST00000401979 A0A1B0GU03 582 aa12.64□□□□□ -0.39
FAM49B-201ENST00000401979 SMAD7O15105 426 aaKnown RBP12.64□□□□□ -0.39
FAM49B-201ENST00000401979 NPFFO15130 113 aa12.64□□□□□ -0.39
FAM49B-201ENST00000401979 SAA4P35542 130 aa12.64□□□□□ -0.39
FAM49B-201ENST00000401979 SMCO1Q147U7 214 aa12.64□□□□□ -0.39
FAM49B-201ENST00000401979 Q5BKY6 102 aa12.64□□□□□ -0.39
FAM49B-201ENST00000401979 LDLRAD2Q5SZI1 272 aa12.64□□□□□ -0.39
FAM49B-201ENST00000401979 OR4C13Q8NGP0 309 aa12.64□□□□□ -0.39
FAM49B-201ENST00000401979 RBMXL1Q96E39 390 aaKnown RBP12.64□□□□□ -0.39
FAM49B-201ENST00000401979 RHOVQ96L33 236 aa12.64□□□□□ -0.39
FAM49B-201ENST00000401979 HARBI1Q96MB7 349 aa12.64□□□□□ -0.39
FAM49B-201ENST00000401979 AIFM2Q9BRQ8 373 aa12.64□□□□□ -0.39
FAM49B-201ENST00000401979 CACNG5Q9UF02 275 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms