RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 DEFA3P59666 94 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 FCN2Q15485 313 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 C12orf74Q32Q52 190 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 LINC00303Q3SY05 128 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 RNF165Q6ZSG1 346 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 MARCH3Q86UD3 253 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 DCAF4L2Q8NA75 395 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 NPBQ8NG41 125 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 SCGB1C1Q8TD33 95 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 LYSMD1Q96S90 227 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 NRIP2Q9BQI9 281 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 THTPAQ9BU02 230 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 ZNF696Q9H7X3 374 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 COPZ2Q9P299 210 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 ANAPC10Q9UM13 185 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 CPS1P31327 1500 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 STRCQ7RTU9 1775 aa3.61□□□□□ -1.83
GABPB1-204ENST00000396464 ARHGAP23Q9P227 1491 aa3.6□□□□□ -1.83
GABPB1-204ENST00000396464 DOCK3Q8IZD9 2030 aa3.6□□□□□ -1.83
GABPB1-204ENST00000396464 XRN1Q8IZH2 1706 aaKnown RBP3.6□□□□□ -1.83
GABPB1-204ENST00000396464 A0A0X1KG70 313 aa3.6□□□□□ -1.83
GABPB1-204ENST00000396464 C5orf63A6NC05 138 aa3.6□□□□□ -1.83
GABPB1-204ENST00000396464 OR4C45A6NMZ5 311 aa3.6□□□□□ -1.83
GABPB1-204ENST00000396464 NDUFC2O95298 119 aa3.6□□□□□ -1.83
GABPB1-204ENST00000396464 ORM2P19652 201 aa3.6□□□□□ -1.83
GABPB1-204ENST00000396464 SERPINB10P48595 397 aa3.6□□□□□ -1.83
GABPB1-204ENST00000396464 EMP1P54849 157 aa3.6□□□□□ -1.83
GABPB1-204ENST00000396464 MPPED2Q15777 294 aa3.6□□□□□ -1.83
GABPB1-204ENST00000396464 ZFAND6Q6FIF0 208 aa3.6□□□□□ -1.83
GABPB1-204ENST00000396464 LYPD2Q6UXB3 125 aa3.6□□□□□ -1.83
GABPB1-204ENST00000396464 ZNF429Q86V71 674 aa3.6□□□□□ -1.83
GABPB1-204ENST00000396464 MBD3L1Q8WWY6 194 aa3.6□□□□□ -1.83
GABPB1-204ENST00000396464 CNBD2Q96M20 576 aa3.6□□□□□ -1.83
GABPB1-204ENST00000396464 SERPINI1Q99574 410 aa3.6□□□□□ -1.83
GABPB1-204ENST00000396464 C12orf57Q99622 126 aa3.6□□□□□ -1.83
GABPB1-204ENST00000396464 PAXXQ9BUH6 204 aa3.6□□□□□ -1.83
GABPB1-204ENST00000396464 CDC42EP4Q9H3Q1 356 aaKnown RBP3.6□□□□□ -1.83
GABPB1-204ENST00000396464 MMP26Q9NRE1 261 aa3.6□□□□□ -1.83
GABPB1-204ENST00000396464 SLC23A2Q9UGH3 650 aa3.6□□□□□ -1.83
GABPB1-204ENST00000396464 FIS1Q9Y3D6 152 aa3.6□□□□□ -1.83
GABPB1-204ENST00000396464 NKTRP30414 1462 aaKnown RBP3.6□□□□□ -1.83
GABPB1-204ENST00000396464 NWD1Q149M9 1564 aa3.59□□□□□ -1.83
GABPB1-204ENST00000396464 MYH2Q9UKX2 1941 aa3.59□□□□□ -1.83
GABPB1-204ENST00000396464 ASXL1Q8IXJ9 1541 aa3.59□□□□□ -1.83
GABPB1-204ENST00000396464 CCDC171Q6TFL3 1326 aa3.59□□□□□ -1.83
GABPB1-204ENST00000396464 NRXN1Q9ULB1 1477 aa3.59□□□□□ -1.83
GABPB1-204ENST00000396464 hCG_1818297A0A087WSY0 165 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 A8MT66 165 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 C5orf58C9J3I9 102 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 FAM72CH0Y354 149 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 CYB5BO43169 146 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 ZNF432O94892 652 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 GADD45GO95257 159 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 ZNF682O95780 498 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 IGLV2-23P01705 113 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 APOA2P02652 100 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 CSN2P05814 226 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 IMPA1P29218 277 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 MDH2P40926 338 aaKnown RBP3.59□□□□□ -1.84
GABPB1-204ENST00000396464 GABARAPL2P60520 117 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 DEFA6Q01524 100 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 ZNF616Q08AN1 781 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 FABP9Q0Z7S8 132 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 TMEM241Q24JQ0 296 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 IBA57Q5T440 356 aaKnown RBP3.59□□□□□ -1.84
GABPB1-204ENST00000396464 HES3Q5TGS1 186 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 FAM72AQ5TYM5 149 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 FAM72DQ6L9T8 149 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 TCF23Q7RTU1 214 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 FAM72BQ86X60 149 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 EXOC3-AS1Q8N2X6 119 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 ZNF615Q8N8J6 731 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 OR2M3Q8NG83 312 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 GPR119Q8TDV5 335 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 DCUN1D4Q92564 292 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 GALMQ96C23 342 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 GPR82Q96P67 336 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 TSPAN32Q96QS1 320 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 FGFBP2Q9BYJ0 223 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 GTSF1LQ9H1H1 148 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 LINC00597Q9H2U6 94 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 SND1-IT1Q9HBX3 110 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 CA10Q9NS85 328 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 MED11Q9P086 117 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 DCCP43146 1447 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 CDC42BPGQ6DT37 1551 aa3.59□□□□□ -1.84
GABPB1-204ENST00000396464 ROBO3Q96MS0 1386 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 KIF20BQ96Q89 1820 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 MED14O60244 1454 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 LOC102724200A0A096LPH7 203 aaPredicted RBP3.58□□□□□ -1.84
GABPB1-204ENST00000396464 IGKV6-21A0A0C4DH24 114 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 CCDC160A6NGH7 325 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 TRAPPC2LH3BP13 241 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 SERF1AO75920 110 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 IGLV1-44P01699 117 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 C8GP07360 202 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 PSG2P11465 335 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 LHX2P50458 406 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 DIO3P55073 304 aa3.58□□□□□ -1.84
GABPB1-204ENST00000396464 PPP1CAP62136 330 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms