RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 NINJ1Q92982 152 aa11.62□□□□□ -0.55
SNCA-204ENST00000394989 HIST1H2BHQ93079 126 aa11.62□□□□□ -0.55
SNCA-204ENST00000394989 SNX22Q96L94 193 aa11.62□□□□□ -0.55
SNCA-204ENST00000394989 HIST1H2BNQ99877 126 aa11.62□□□□□ -0.55
SNCA-204ENST00000394989 HIST1H2BMQ99879 126 aa11.62□□□□□ -0.55
SNCA-204ENST00000394989 MRPL37Q9BZE1 423 aaKnown RBP11.62□□□□□ -0.55
SNCA-204ENST00000394989 LINC00473A8K010 186 aa11.61□□□□□ -0.55
SNCA-204ENST00000394989 TSTD3H0UI37 97 aa11.61□□□□□ -0.55
SNCA-204ENST00000394989 G6PCP35575 357 aa11.61□□□□□ -0.55
SNCA-204ENST00000394989 RPL23AP62750 156 aaKnown RBP11.61□□□□□ -0.55
SNCA-204ENST00000394989 ZNF816Q0VGE8 651 aaPredicted RBP11.61□□□□□ -0.55
SNCA-204ENST00000394989 FAM201AQ5SY85 155 aa11.61□□□□□ -0.55
SNCA-204ENST00000394989 ITLN1Q8WWA0 313 aa11.61□□□□□ -0.55
SNCA-204ENST00000394989 RAB39BQ96DA2 213 aa11.61□□□□□ -0.55
SNCA-204ENST00000394989 A0A0G2JNJ9 132 aa11.61□□□□□ -0.55
SNCA-204ENST00000394989 SLC31A2O15432 143 aa11.61□□□□□ -0.55
SNCA-204ENST00000394989 S1PR2O95136 353 aa11.61□□□□□ -0.55
SNCA-204ENST00000394989 KRASP01116 189 aa11.61□□□□□ -0.55
SNCA-204ENST00000394989 SP5Q6BEB4 398 aaPredicted RBP11.61□□□□□ -0.55
SNCA-204ENST00000394989 COMMD1Q8N668 190 aa11.61□□□□□ -0.55
SNCA-204ENST00000394989 Q9UFV3 132 aa11.61□□□□□ -0.55
SNCA-204ENST00000394989 H3BQ15 152 aa11.61□□□□□ -0.55
SNCA-204ENST00000394989 TCAPO15273 167 aa11.61□□□□□ -0.55
SNCA-204ENST00000394989 DSCAMO60469 2012 aa11.61□□□□□ -0.55
SNCA-204ENST00000394989 PROP1O75360 226 aa11.61□□□□□ -0.55
SNCA-204ENST00000394989 HIST1H1BP16401 226 aaKnown RBP11.61□□□□□ -0.55
SNCA-204ENST00000394989 SPSB3Q6PJ21 355 aa11.61□□□□□ -0.55
SNCA-204ENST00000394989 TUBA4BQ9H853 241 aa11.61□□□□□ -0.55
SNCA-204ENST00000394989 ICE1Q9Y2F5 2266 aa11.6□□□□□ -0.55
SNCA-204ENST00000394989 METTL15P1P0C7V9 234 aa11.6□□□□□ -0.55
SNCA-204ENST00000394989 HTD2P86397 168 aa11.6□□□□□ -0.55
SNCA-204ENST00000394989 HNF4GQ14541 408 aa11.6□□□□□ -0.55
SNCA-204ENST00000394989 LTC4SQ16873 150 aa11.6□□□□□ -0.55
SNCA-204ENST00000394989 FAM90A1Q86YD7 464 aa11.6□□□□□ -0.55
SNCA-204ENST00000394989 PSENENQ9NZ42 101 aa11.6□□□□□ -0.55
SNCA-204ENST00000394989 PSG11Q9UQ72 335 aa11.6□□□□□ -0.55
SNCA-204ENST00000394989 ODAMA1E959 279 aa11.6□□□□□ -0.55
SNCA-204ENST00000394989 DLK1P80370 383 aa11.6□□□□□ -0.55
SNCA-204ENST00000394989 CISD2Q8N5K1 135 aaKnown RBP11.6□□□□□ -0.55
SNCA-204ENST00000394989 PLPPR2Q96GM1 343 aa11.6□□□□□ -0.55
SNCA-204ENST00000394989 ZZEF1O43149 2961 aa11.59□□□□□ -0.55
SNCA-204ENST00000394989 TRGC1P0CF51 173 aa11.59□□□□□ -0.55
SNCA-204ENST00000394989 CD40P25942 277 aa11.59□□□□□ -0.55
SNCA-204ENST00000394989 RHEBQ15382 184 aa11.59□□□□□ -0.55
SNCA-204ENST00000394989 GNPNAT1Q96EK6 184 aaPredicted RBP11.59□□□□□ -0.55
SNCA-204ENST00000394989 CLDN1O95832 211 aa11.59□□□□□ -0.55
SNCA-204ENST00000394989 TNFRSF9Q07011 255 aa11.59□□□□□ -0.55
SNCA-204ENST00000394989 MSMO1Q15800 293 aa11.59□□□□□ -0.55
SNCA-204ENST00000394989 CR1LQ2VPA4 569 aa11.59□□□□□ -0.55
SNCA-204ENST00000394989 UTF1Q5T230 341 aa11.59□□□□□ -0.55
SNCA-204ENST00000394989 ZGRF1Q86YA3 2104 aa11.59□□□□□ -0.55
SNCA-204ENST00000394989 WFIKKN1Q96NZ8 548 aa11.59□□□□□ -0.55
SNCA-204ENST00000394989 MGST3O14880 152 aa11.59□□□□□ -0.55
SNCA-204ENST00000394989 SPINT2O43291 252 aa11.59□□□□□ -0.55
SNCA-204ENST00000394989 GATA4P43694 442 aa11.59□□□□□ -0.55
SNCA-204ENST00000394989 TAS2R30P59541 319 aa11.59□□□□□ -0.55
SNCA-204ENST00000394989 TAS2R60P59551 318 aa11.59□□□□□ -0.55
SNCA-204ENST00000394989 FOXC1Q12948 553 aa11.59□□□□□ -0.55
SNCA-204ENST00000394989 DUX4L9Q6RFH8 374 aaPredicted RBP11.59□□□□□ -0.55
SNCA-204ENST00000394989 REC114Q7Z4M0 266 aa11.59□□□□□ -0.55
SNCA-204ENST00000394989 SPACA3Q8IXA5 215 aa11.59□□□□□ -0.55
SNCA-204ENST00000394989 CYB561D1Q8N8Q1 229 aa11.59□□□□□ -0.55
SNCA-204ENST00000394989 FRZBQ92765 325 aa11.59□□□□□ -0.55
SNCA-204ENST00000394989 GCM1Q9NP62 436 aa11.59□□□□□ -0.55
SNCA-204ENST00000394989 HSPB7Q9UBY9 170 aa11.59□□□□□ -0.55
SNCA-204ENST00000394989 ADH4P08319 380 aa11.58□□□□□ -0.56
SNCA-204ENST00000394989 LOXL3P58215 753 aa11.58□□□□□ -0.56
SNCA-204ENST00000394989 ZNF525Q8N782 197 aa11.58□□□□□ -0.56
SNCA-204ENST00000394989 PACRGQ96M98 296 aaPredicted RBP11.58□□□□□ -0.56
SNCA-204ENST00000394989 PBDC1Q9BVG4 233 aa11.58□□□□□ -0.56
SNCA-204ENST00000394989 RBKSQ9H477 322 aa11.58□□□□□ -0.56
SNCA-204ENST00000394989 DFFBO76075 338 aa11.58□□□□□ -0.56
SNCA-204ENST00000394989 IGHV1-46P01743 117 aa11.58□□□□□ -0.56
SNCA-204ENST00000394989 ZNF134P52741 427 aa11.58□□□□□ -0.56
SNCA-204ENST00000394989 CATR1Q13166 79 aa11.58□□□□□ -0.56
SNCA-204ENST00000394989 ELOBQ15370 118 aa11.58□□□□□ -0.56
SNCA-204ENST00000394989 MORN2Q502X0 79 aa11.58□□□□□ -0.56
SNCA-204ENST00000394989 TRAT1Q6PIZ9 186 aa11.58□□□□□ -0.56
SNCA-204ENST00000394989 THNSL2Q86YJ6 484 aa11.58□□□□□ -0.56
SNCA-204ENST00000394989 TGIF2LYQ8IUE0 185 aa11.58□□□□□ -0.56
SNCA-204ENST00000394989 NECAP1Q8NC96 275 aa11.58□□□□□ -0.56
SNCA-204ENST00000394989 RSG1Q9BU20 258 aa11.58□□□□□ -0.56
SNCA-204ENST00000394989 RAI1Q7Z5J4 1906 aaPredicted RBP11.58□□□□□ -0.56
SNCA-204ENST00000394989 FAM90A26D6RGX4 464 aa11.57□□□□□ -0.56
SNCA-204ENST00000394989 GZMHP20718 246 aa11.57□□□□□ -0.56
SNCA-204ENST00000394989 PAX6P26367 422 aa11.57□□□□□ -0.56
SNCA-204ENST00000394989 SPANXN5Q5MJ07 72 aa11.57□□□□□ -0.56
SNCA-204ENST00000394989 DSCAML1Q8TD84 2053 aa11.57□□□□□ -0.56
SNCA-204ENST00000394989 LRRC30A6NM36 301 aa11.57□□□□□ -0.56
SNCA-204ENST00000394989 IGHV3-7P01780 117 aa11.57□□□□□ -0.56
SNCA-204ENST00000394989 MRGPRGQ86SM5 289 aa11.57□□□□□ -0.56
SNCA-204ENST00000394989 FAM222BQ8WU58 562 aa11.57□□□□□ -0.56
SNCA-204ENST00000394989 PRRG2O14669 202 aa11.57□□□□□ -0.56
SNCA-204ENST00000394989 EDDM3BP56851 147 aa11.57□□□□□ -0.56
SNCA-204ENST00000394989 PRR30Q53SZ7 412 aaPredicted RBP11.57□□□□□ -0.56
SNCA-204ENST00000394989 NCR3LG1Q68D85 454 aa11.57□□□□□ -0.56
SNCA-204ENST00000394989 ZNF66Q6ZN08 573 aa11.57□□□□□ -0.56
SNCA-204ENST00000394989 ZNF429Q86V71 674 aa11.57□□□□□ -0.56
SNCA-204ENST00000394989 SCNM1Q9BWG6 230 aa11.57□□□□□ -0.56
SNCA-204ENST00000394989 SH3BGRL2Q9UJC5 107 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms