RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 CISD1Q9NZ45 108 aaKnown RBP8.85□□□□□ -0.99
ACTN1-203ENST00000394419 MARCH11A6NNE9 402 aa8.85□□□□□ -0.99
ACTN1-203ENST00000394419 C11orf94C9JXX5 98 aa8.85□□□□□ -0.99
ACTN1-203ENST00000394419 ACTL6BO94805 426 aa8.85□□□□□ -0.99
ACTN1-203ENST00000394419 GNG10P50151 68 aa8.85□□□□□ -0.99
ACTN1-203ENST00000394419 PNRC1Q12796 327 aaPredicted RBP8.85□□□□□ -0.99
ACTN1-203ENST00000394419 PYY3Q5JQD4 70 aa8.85□□□□□ -0.99
ACTN1-203ENST00000394419 FAM90A2PQ658T7 463 aa8.85□□□□□ -0.99
ACTN1-203ENST00000394419 MRPL41Q8IXM3 137 aaKnown RBP8.85□□□□□ -0.99
ACTN1-203ENST00000394419 OR10A7Q8NGE5 316 aa8.85□□□□□ -0.99
ACTN1-203ENST00000394419 MALSU1Q96EH3 234 aa8.85□□□□□ -0.99
ACTN1-203ENST00000394419 POM121Q96HA1 1249 aa8.85□□□□□ -0.99
ACTN1-203ENST00000394419 HIPK2Q9H2X6 1198 aa8.85□□□□□ -0.99
ACTN1-203ENST00000394419 PARLQ9H300 379 aa8.85□□□□□ -0.99
ACTN1-203ENST00000394419 GCM1Q9NP62 436 aa8.85□□□□□ -0.99
ACTN1-203ENST00000394419 NAT8Q9UHE5 227 aa8.85□□□□□ -0.99
ACTN1-203ENST00000394419 OTOGLQ3ZCN5 2332 aa8.85□□□□□ -0.99
ACTN1-203ENST00000394419 KIAA1549Q9HCM3 1950 aa8.85□□□□□ -0.99
ACTN1-203ENST00000394419 SOD3P08294 240 aa8.85□□□□□ -0.99
ACTN1-203ENST00000394419 FOXF2Q12947 444 aa8.85□□□□□ -0.99
ACTN1-203ENST00000394419 PACRGQ96M98 296 aaPredicted RBP8.85□□□□□ -0.99
ACTN1-203ENST00000394419 ELOVL1Q9BW60 279 aa8.85□□□□□ -0.99
ACTN1-203ENST00000394419 QTRT1Q9BXR0 403 aaKnown RBP8.85□□□□□ -0.99
ACTN1-203ENST00000394419 FUT9Q9Y231 359 aa8.85□□□□□ -0.99
ACTN1-203ENST00000394419 TP53TG5Q9Y2B4 290 aa8.85□□□□□ -0.99
ACTN1-203ENST00000394419 ZGRF1Q86YA3 2104 aa8.84□□□□□ -0.99
ACTN1-203ENST00000394419 ZNF320A2RRD8 509 aa8.84□□□□□ -0.99
ACTN1-203ENST00000394419 XKRY2A2RUG3 117 aa8.84□□□□□ -0.99
ACTN1-203ENST00000394419 M0R296 226 aa8.84□□□□□ -0.99
ACTN1-203ENST00000394419 IGKV1D-33P01593 117 aa8.84□□□□□ -0.99
ACTN1-203ENST00000394419 IGKV1-33P01594 117 aa8.84□□□□□ -0.99
ACTN1-203ENST00000394419 IGHV2-5P01817 119 aa8.84□□□□□ -0.99
ACTN1-203ENST00000394419 CECR9P0C854 216 aa8.84□□□□□ -0.99
ACTN1-203ENST00000394419 PAX6P26367 422 aa8.84□□□□□ -0.99
ACTN1-203ENST00000394419 PRDX2P32119 198 aa8.84□□□□□ -0.99
ACTN1-203ENST00000394419 SSTP61278 116 aa8.84□□□□□ -0.99
ACTN1-203ENST00000394419 RPL39P5Q59GN2 51 aa8.84□□□□□ -0.99
ACTN1-203ENST00000394419 DPPA3Q6W0C5 159 aa8.84□□□□□ -0.99
ACTN1-203ENST00000394419 MOGAT3Q86VF5 341 aa8.84□□□□□ -0.99
ACTN1-203ENST00000394419 ABHD12Q8N2K0 398 aa8.84□□□□□ -0.99
ACTN1-203ENST00000394419 KDF1Q8NAX2 398 aaPredicted RBP8.84□□□□□ -0.99
ACTN1-203ENST00000394419 OR8G5Q8NG78 346 aa8.84□□□□□ -0.99
ACTN1-203ENST00000394419 GTF3AQ92664 365 aaKnown RBP8.84□□□□□ -0.99
ACTN1-203ENST00000394419 S1PR3Q99500 378 aa8.84□□□□□ -0.99
ACTN1-203ENST00000394419 C11orf1Q9H5F2 150 aa8.84□□□□□ -0.99
ACTN1-203ENST00000394419 SDF2L1Q9HCN8 221 aa8.84□□□□□ -0.99
ACTN1-203ENST00000394419 CTXND1A0A1B0GTU2 59 aa8.84□□□□□ -0.99
ACTN1-203ENST00000394419 PGPEP1LA6NFU8 196 aa8.84□□□□□ -0.99
ACTN1-203ENST00000394419 MLNRO43193 412 aa8.84□□□□□ -0.99
ACTN1-203ENST00000394419 TDGF1P13385 188 aa8.84□□□□□ -0.99
ACTN1-203ENST00000394419 ACOT6Q3I5F7 207 aaPredicted RBP8.84□□□□□ -0.99
ACTN1-203ENST00000394419 FAM78BQ5VT40 261 aa8.84□□□□□ -0.99
ACTN1-203ENST00000394419 DMRTC2Q8IXT2 367 aaPredicted RBP8.84□□□□□ -0.99
ACTN1-203ENST00000394419 PPP1R35Q8TAP8 253 aa8.84□□□□□ -0.99
ACTN1-203ENST00000394419 CIB3Q96Q77 187 aaPredicted RBP8.84□□□□□ -0.99
ACTN1-203ENST00000394419 TAAR6Q96RI8 345 aa8.84□□□□□ -0.99
ACTN1-203ENST00000394419 C1QTNF9BB2RNN3 333 aa8.84□□□□□ -1
ACTN1-203ENST00000394419 B4DEV8 164 aa8.84□□□□□ -1
ACTN1-203ENST00000394419 SRSF7Q16629 238 aaKnown RBP eCLIP8.84□□□□□ -13e-14■■■■□ 24.7
ACTN1-203ENST00000394419 INO80CQ6PI98 192 aaPredicted RBP8.84□□□□□ -1
ACTN1-203ENST00000394419 PROCRQ9UNN8 238 aa8.84□□□□□ -1
ACTN1-203ENST00000394419 CFAP47Q6ZTR5 3102 aa8.83□□□□□ -1
ACTN1-203ENST00000394419 WNK2Q9Y3S1 2297 aa8.83□□□□□ -1
ACTN1-203ENST00000394419 CXorf65A6NEN9 183 aa8.83□□□□□ -1
ACTN1-203ENST00000394419 LINC00473A8K010 186 aa8.83□□□□□ -1
ACTN1-203ENST00000394419 SPINK4O60575 86 aa8.83□□□□□ -1
ACTN1-203ENST00000394419 NDUFB4O95168 129 aa8.83□□□□□ -1
ACTN1-203ENST00000394419 MBP02144 154 aa8.83□□□□□ -1
ACTN1-203ENST00000394419 CEACAM1P13688 526 aa8.83□□□□□ -1
ACTN1-203ENST00000394419 TNFSF10P50591 281 aa8.83□□□□□ -1
ACTN1-203ENST00000394419 GAMTQ14353 236 aa8.83□□□□□ -1
ACTN1-203ENST00000394419 GABRA6Q16445 453 aa8.83□□□□□ -1
ACTN1-203ENST00000394419 ACP7Q6ZNF0 438 aa8.83□□□□□ -1
ACTN1-203ENST00000394419 ZNF295-AS1Q8N0V1 137 aa8.83□□□□□ -1
ACTN1-203ENST00000394419 LYG1Q8N1E2 194 aa8.83□□□□□ -1
ACTN1-203ENST00000394419 C9orf106Q8NAJ2 232 aa8.83□□□□□ -1
ACTN1-203ENST00000394419 SARAFQ96BY9 339 aa8.83□□□□□ -1
ACTN1-203ENST00000394419 NEIL1Q96FI4 390 aaPredicted RBP8.83□□□□□ -1
ACTN1-203ENST00000394419 PSMG3Q9BT73 122 aaPredicted RBP8.83□□□□□ -1
ACTN1-203ENST00000394419 CACNA1BQ00975 2339 aa8.83□□□□□ -1
ACTN1-203ENST00000394419 A0A1B0GW64 132 aa8.83□□□□□ -1
ACTN1-203ENST00000394419 TSTD3H0UI37 97 aa8.83□□□□□ -1
ACTN1-203ENST00000394419 CDX4O14627 284 aaPredicted RBP8.83□□□□□ -1
ACTN1-203ENST00000394419 IGLV2-14P01704 120 aa8.83□□□□□ -1
ACTN1-203ENST00000394419 GYPAP02724 150 aa8.83□□□□□ -1
ACTN1-203ENST00000394419 MDS2Q8NDY4 140 aa8.83□□□□□ -1
ACTN1-203ENST00000394419 EDARADDQ8WWZ3 215 aa8.83□□□□□ -1
ACTN1-203ENST00000394419 CEP295Q9C0D2 2601 aa8.83□□□□□ -1
ACTN1-203ENST00000394419 A0A087WWC5 75 aa8.82□□□□□ -1
ACTN1-203ENST00000394419 SNRPCP09234 159 aaKnown RBP8.82□□□□□ -1
ACTN1-203ENST00000394419 G0S2P27469 103 aa8.82□□□□□ -1
ACTN1-203ENST00000394419 CD1BP29016 333 aa8.82□□□□□ -1
ACTN1-203ENST00000394419 SELENOVP59797 346 aa8.82□□□□□ -1
ACTN1-203ENST00000394419 ZNF146Q15072 292 aa8.82□□□□□ -1
ACTN1-203ENST00000394419 Q6ZT83 130 aa8.82□□□□□ -1
ACTN1-203ENST00000394419 LRP11Q86VZ4 500 aa8.82□□□□□ -1
ACTN1-203ENST00000394419 ABHD5Q8WTS1 349 aa8.82□□□□□ -1
ACTN1-203ENST00000394419 COQ2Q96H96 371 aa8.82□□□□□ -1
ACTN1-203ENST00000394419 NPCDR1Q9BY65 106 aa8.82□□□□□ -1
ACTN1-203ENST00000394419 AQP7O14520 342 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms