RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 RAB9AP51151 201 aa23.95■■□□□ 1.42
CMTM4-202ENST00000394106 FXYD3Q14802 87 aa23.95■■□□□ 1.42
CMTM4-202ENST00000394106 ZNF491Q8N8L2 437 aa23.95■■□□□ 1.42
CMTM4-202ENST00000394106 CASTOR1Q8WTX7 329 aa23.95■■□□□ 1.42
CMTM4-202ENST00000394106 ARPC1AQ92747 370 aa23.95■■□□□ 1.42
CMTM4-202ENST00000394106 UBE2E2Q96LR5 201 aa23.95■■□□□ 1.42
CMTM4-202ENST00000394106 OR5B12Q96R08 314 aa23.95■■□□□ 1.42
CMTM4-202ENST00000394106 GNB4Q9HAV0 340 aa23.95■■□□□ 1.42
CMTM4-202ENST00000394106 AURKAIP1Q9NWT8 199 aaPredicted RBP23.95■■□□□ 1.42
CMTM4-202ENST00000394106 MEIS3P1A6NDR6 274 aa23.94■■□□□ 1.42
CMTM4-202ENST00000394106 CRYZL1O95825 349 aa23.94■■□□□ 1.42
CMTM4-202ENST00000394106 KIAA0141Q14154 515 aaPredicted RBP23.94■■□□□ 1.42
CMTM4-202ENST00000394106 ACTBL2Q562R1 376 aa23.94■■□□□ 1.42
CMTM4-202ENST00000394106 TCTEX1D1Q8N7M0 179 aa23.94■■□□□ 1.42
CMTM4-202ENST00000394106 LFNGQ8NES3 379 aa23.94■■□□□ 1.42
CMTM4-202ENST00000394106 VSIG4Q9Y279 399 aa23.94■■□□□ 1.42
CMTM4-202ENST00000394106 RBMX2Q9Y388 322 aaKnown RBP23.94■■□□□ 1.42
CMTM4-202ENST00000394106 SRRM4A7MD48 611 aaKnown RBP23.93■■□□□ 1.42
CMTM4-202ENST00000394106 ARPC1BO15143 372 aaKnown RBP23.93■■□□□ 1.42
CMTM4-202ENST00000394106 CNIH1O95406 144 aa23.93■■□□□ 1.42
CMTM4-202ENST00000394106 PJVKQ0ZLH3 352 aa23.93■■□□□ 1.42
CMTM4-202ENST00000394106 MCRIP2Q9BUT9 160 aaKnown RBP23.93■■□□□ 1.42
CMTM4-202ENST00000394106 SLC22A5O76082 557 aa23.92■■□□□ 1.42
CMTM4-202ENST00000394106 CRYGBP07316 175 aa23.92■■□□□ 1.42
CMTM4-202ENST00000394106 HOXD3P31249 432 aaPredicted RBP23.92■■□□□ 1.42
CMTM4-202ENST00000394106 CBX5P45973 191 aa23.92■■□□□ 1.42
CMTM4-202ENST00000394106 TMEM69Q5SWH9 247 aa23.92■■□□□ 1.42
CMTM4-202ENST00000394106 KCTD9Q7L273 389 aa23.92■■□□□ 1.42
CMTM4-202ENST00000394106 GPR61Q9BZJ8 451 aa23.92■■□□□ 1.42
CMTM4-202ENST00000394106 IGLV2-14P01704 120 aa23.91■■□□□ 1.42
CMTM4-202ENST00000394106 FCGR2CP31995 323 aa23.91■■□□□ 1.42
CMTM4-202ENST00000394106 TAS2R20P59543 309 aa23.91■■□□□ 1.42
CMTM4-202ENST00000394106 AKIRIN2Q53H80 203 aa23.91■■□□□ 1.42
CMTM4-202ENST00000394106 OR2B11Q5JQS5 317 aa23.91■■□□□ 1.42
CMTM4-202ENST00000394106 OR11H1Q8NG94 326 aa23.91■■□□□ 1.42
CMTM4-202ENST00000394106 MRAPQ8TCY5 172 aa23.91■■□□□ 1.42
CMTM4-202ENST00000394106 KCTD12Q96CX2 325 aaKnown RBP23.91■■□□□ 1.42
CMTM4-202ENST00000394106 DCUN1D5Q9BTE7 237 aa23.91■■□□□ 1.42
CMTM4-202ENST00000394106 IFT46Q9NQC8 304 aa23.91■■□□□ 1.42
CMTM4-202ENST00000394106 COMMD3Q9UBI1 195 aa23.91■■□□□ 1.42
CMTM4-202ENST00000394106 FCGR3BO75015 233 aa23.9■■□□□ 1.42
CMTM4-202ENST00000394106 AADACP22760 399 aa23.9■■□□□ 1.42
CMTM4-202ENST00000394106 VMA21Q3ZAQ7 101 aa23.9■■□□□ 1.42
CMTM4-202ENST00000394106 OR5M8Q8NGP6 311 aa23.9■■□□□ 1.42
CMTM4-202ENST00000394106 DPF1Q92782 380 aa23.9■■□□□ 1.42
CMTM4-202ENST00000394106 SNAPC3Q92966 411 aa23.9■■□□□ 1.42
CMTM4-202ENST00000394106 NAA50Q9GZZ1 169 aaKnown RBP23.9■■□□□ 1.42
CMTM4-202ENST00000394106 PRELID3BQ9Y3B1 194 aa23.9■■□□□ 1.42
CMTM4-202ENST00000394106 RPL30P62888 115 aaKnown RBP23.89■■□□□ 1.41
CMTM4-202ENST00000394106 SSBP2P81877 361 aaPredicted RBP23.89■■□□□ 1.41
CMTM4-202ENST00000394106 OSR1Q8TAX0 266 aaPredicted RBP23.89■■□□□ 1.41
CMTM4-202ENST00000394106 SECTM1Q8WVN6 248 aa23.89■■□□□ 1.41
CMTM4-202ENST00000394106 MS4A10Q96PG2 267 aa23.89■■□□□ 1.41
CMTM4-202ENST00000394106 PRKDCP78527 4128 aaKnown RBP23.88■■□□□ 1.41
CMTM4-202ENST00000394106 I3L521 148 aa23.88■■□□□ 1.41
CMTM4-202ENST00000394106 EIF4EP06730 217 aaKnown RBP23.88■■□□□ 1.41
CMTM4-202ENST00000394106 KRTAP10-11P60412 298 aa23.88■■□□□ 1.41
CMTM4-202ENST00000394106 UBE2KP61086 200 aa23.88■■□□□ 1.41
CMTM4-202ENST00000394106 PYHIN1Q6K0P9 492 aa23.88■■□□□ 1.41
CMTM4-202ENST00000394106 IDO2Q6ZQW0 420 aa23.88■■□□□ 1.41
CMTM4-202ENST00000394106 OR1N2Q8NGR9 330 aa23.88■■□□□ 1.41
CMTM4-202ENST00000394106 TCTEX1D2Q8WW35 142 aa23.88■■□□□ 1.41
CMTM4-202ENST00000394106 MRPS7Q9Y2R9 242 aaKnown RBP23.88■■□□□ 1.41
CMTM4-202ENST00000394106 CD40LGP29965 261 aa23.87■■□□□ 1.41
CMTM4-202ENST00000394106 FHL3Q13643 280 aa23.87■■□□□ 1.41
CMTM4-202ENST00000394106 OR5AP2Q8NGF4 316 aa23.87■■□□□ 1.41
CMTM4-202ENST00000394106 HSD17B10Q99714 261 aaKnown RBP23.87■■□□□ 1.41
CMTM4-202ENST00000394106 ALX4Q9H161 411 aaPredicted RBP23.87■■□□□ 1.41
CMTM4-202ENST00000394106 TAS2R8Q9NYW2 309 aa23.87■■□□□ 1.41
CMTM4-202ENST00000394106 TGP01266 2768 aa23.86■■□□□ 1.41
CMTM4-202ENST00000394106 PPYP01298 95 aa23.86■■□□□ 1.41
CMTM4-202ENST00000394106 TPPP2P59282 170 aa23.86■■□□□ 1.41
CMTM4-202ENST00000394106 RUNX1Q01196 453 aa23.86■■□□□ 1.41
CMTM4-202ENST00000394106 OVCH2Q7RTZ1 564 aa23.86■■□□□ 1.41
CMTM4-202ENST00000394106 ANKRD13BQ86YJ7 626 aa23.86■■□□□ 1.41
CMTM4-202ENST00000394106 TEX45Q8NA69 505 aa23.86■■□□□ 1.41
CMTM4-202ENST00000394106 MRPS26Q9BYN8 205 aaKnown RBP23.86■■□□□ 1.41
CMTM4-202ENST00000394106 CCL28Q9NRJ3 127 aa23.86■■□□□ 1.41
CMTM4-202ENST00000394106 ZNF355PQ9NSJ1 428 aa23.86■■□□□ 1.41
CMTM4-202ENST00000394106 FXYD4P59646 89 aa23.85■■□□□ 1.41
CMTM4-202ENST00000394106 ZNF616Q08AN1 781 aa23.85■■□□□ 1.41
CMTM4-202ENST00000394106 CDK10Q15131 360 aa23.85■■□□□ 1.41
CMTM4-202ENST00000394106 GPR107Q5VW38 600 aa23.85■■□□□ 1.41
CMTM4-202ENST00000394106 OR5T1Q8NG75 326 aa23.85■■□□□ 1.41
CMTM4-202ENST00000394106 GPHA2Q96T91 129 aa23.85■■□□□ 1.41
CMTM4-202ENST00000394106 TNFSF12O43508 249 aa23.84■■□□□ 1.41
CMTM4-202ENST00000394106 GABARAPO95166 117 aa23.84■■□□□ 1.41
CMTM4-202ENST00000394106 OR8U8P0C7N1 319 aa23.84■■□□□ 1.41
CMTM4-202ENST00000394106 SAA1P0DJI8 122 aaPredicted RBP23.84■■□□□ 1.41
CMTM4-202ENST00000394106 RORCP51449 518 aa23.84■■□□□ 1.41
CMTM4-202ENST00000394106 EGFEM1PQ0D2K5 195 aa23.84■■□□□ 1.41
CMTM4-202ENST00000394106 EIF4EBP1Q13541 118 aaPredicted RBP23.84■■□□□ 1.41
CMTM4-202ENST00000394106 TNXAQ16473 311 aa23.84■■□□□ 1.41
CMTM4-202ENST00000394106 CTF1Q16619 201 aa23.84■■□□□ 1.41
CMTM4-202ENST00000394106 PRSS8Q16651 343 aa23.84■■□□□ 1.41
CMTM4-202ENST00000394106 MRGPRG-AS1Q2M3A8 158 aa23.84■■□□□ 1.41
CMTM4-202ENST00000394106 MFSD4AQ8N468 514 aa23.84■■□□□ 1.41
CMTM4-202ENST00000394106 PHB2Q99623 299 aa23.84■■□□□ 1.41
CMTM4-202ENST00000394106 SLC5A7Q9GZV3 580 aa23.84■■□□□ 1.41
CMTM4-202ENST00000394106 IGHV3-11P01762 117 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms