RNA–Protein interactions for RNA: ENST00000394013.6

RNF41-202, Transcript of ring finger protein 41, humanhuman

TSL 1 (best) BASIC

Gene RNF41, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-202ENST00000394013 RNASEK-C17orf49H0YIS7 233 aa11.76□□□□□ -0.53
RNF41-202ENST00000394013 TMEM88Q6PEY1 159 aa11.76□□□□□ -0.53
RNF41-202ENST00000394013 TRAT1Q6PIZ9 186 aa11.76□□□□□ -0.53
RNF41-202ENST00000394013 ETV3LQ6ZN32 361 aa11.76□□□□□ -0.53
RNF41-202ENST00000394013 EDARADDQ8WWZ3 215 aa11.76□□□□□ -0.53
RNF41-202ENST00000394013 HSD17B10Q99714 261 aaKnown RBP11.76□□□□□ -0.53
RNF41-202ENST00000394013 SCRT1Q9BWW7 348 aa11.76□□□□□ -0.53
RNF41-202ENST00000394013 PPIAL4EA0A075B759 164 aa11.76□□□□□ -0.53
RNF41-202ENST00000394013 PPIAL4DF5H284 164 aa11.76□□□□□ -0.53
RNF41-202ENST00000394013 TSPAN15O95858 294 aa11.76□□□□□ -0.53
RNF41-202ENST00000394013 CD3EP07766 207 aa11.76□□□□□ -0.53
RNF41-202ENST00000394013 PPIAL4FP0DN26 164 aa11.76□□□□□ -0.53
RNF41-202ENST00000394013 F2RL1P55085 397 aa11.76□□□□□ -0.53
RNF41-202ENST00000394013 CASP6P55212 293 aa11.76□□□□□ -0.53
RNF41-202ENST00000394013 DIAPH2-AS1Q14236 149 aa11.76□□□□□ -0.53
RNF41-202ENST00000394013 ZNF266Q14584 549 aa11.76□□□□□ -0.53
RNF41-202ENST00000394013 ZNF66Q6ZN08 573 aa11.76□□□□□ -0.53
RNF41-202ENST00000394013 ZNF525Q8N782 197 aa11.76□□□□□ -0.53
RNF41-202ENST00000394013 ST6GALNAC3Q8NDV1 305 aa11.76□□□□□ -0.53
RNF41-202ENST00000394013 TSNAXQ99598 290 aaKnown RBP11.76□□□□□ -0.53
RNF41-202ENST00000394013 RARRES2Q99969 163 aa11.76□□□□□ -0.53
RNF41-202ENST00000394013 HSPB7Q9UBY9 170 aa11.76□□□□□ -0.53
RNF41-202ENST00000394013 PPIAL4AQ9Y536 164 aa11.76□□□□□ -0.53
RNF41-202ENST00000394013 PLXNB1O43157 2135 aa11.75□□□□□ -0.53
RNF41-202ENST00000394013 FAM157AC9JC47 383 aa11.75□□□□□ -0.53
RNF41-202ENST00000394013 TSPAN4O14817 238 aa11.75□□□□□ -0.53
RNF41-202ENST00000394013 ATG12O94817 140 aa11.75□□□□□ -0.53
RNF41-202ENST00000394013 SFTA3P0C7M3 94 aa11.75□□□□□ -0.53
RNF41-202ENST00000394013 MMP9P14780 707 aa11.75□□□□□ -0.53
RNF41-202ENST00000394013 COL8A2P25067 703 aa11.75□□□□□ -0.53
RNF41-202ENST00000394013 REG1BP48304 166 aa11.75□□□□□ -0.53
RNF41-202ENST00000394013 IL34Q6ZMJ4 242 aa11.75□□□□□ -0.53
RNF41-202ENST00000394013 ZNF383Q8NA42 475 aa11.75□□□□□ -0.53
RNF41-202ENST00000394013 ZNF439Q8NDP4 499 aa11.75□□□□□ -0.53
RNF41-202ENST00000394013 ZCCHC14Q8WYQ9 949 aaKnown RBP11.75□□□□□ -0.53
RNF41-202ENST00000394013 UBE2L5PA0A1B0GUS4 154 aa11.75□□□□□ -0.53
RNF41-202ENST00000394013 NPBWR1P48145 328 aa11.75□□□□□ -0.53
RNF41-202ENST00000394013 RPL31P62899 125 aaKnown RBP11.75□□□□□ -0.53
RNF41-202ENST00000394013 BAXQ07812 192 aa11.75□□□□□ -0.53
RNF41-202ENST00000394013 TMEM200BQ69YZ2 307 aa11.75□□□□□ -0.53
RNF41-202ENST00000394013 SSX7Q7RTT5 188 aa11.75□□□□□ -0.53
RNF41-202ENST00000394013 LYPD6BQ8NI32 183 aa11.75□□□□□ -0.53
RNF41-202ENST00000394013 IDI2-AS1Q9NZ38 188 aa11.75□□□□□ -0.53
RNF41-202ENST00000394013 ZFYVE26Q68DK2 2539 aa11.74□□□□□ -0.53
RNF41-202ENST00000394013 IGSF10Q6WRI0 2623 aa11.74□□□□□ -0.53
RNF41-202ENST00000394013 DEFA4P12838 97 aa11.74□□□□□ -0.53
RNF41-202ENST00000394013 CHRNB4P30926 498 aa11.74□□□□□ -0.53
RNF41-202ENST00000394013 SNCAP37840 140 aa11.74□□□□□ -0.53
RNF41-202ENST00000394013 PPT1P50897 306 aa11.74□□□□□ -0.53
RNF41-202ENST00000394013 AKIRIN2Q53H80 203 aa11.74□□□□□ -0.53
RNF41-202ENST00000394013 SLC25A24Q6NUK1 477 aa11.74□□□□□ -0.53
RNF41-202ENST00000394013 UQCC3Q6UW78 93 aa11.74□□□□□ -0.53
RNF41-202ENST00000394013 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.74□□□□□ -0.53
RNF41-202ENST00000394013 IGKV1-16P04430 117 aa11.74□□□□□ -0.53
RNF41-202ENST00000394013 CD5P06127 495 aa11.74□□□□□ -0.53
RNF41-202ENST00000394013 AKR1C3P42330 323 aa11.74□□□□□ -0.53
RNF41-202ENST00000394013 UQCRFS1P47985 274 aa11.74□□□□□ -0.53
RNF41-202ENST00000394013 MRPS11P82912 194 aaKnown RBP11.74□□□□□ -0.53
RNF41-202ENST00000394013 SPSB3Q6PJ21 355 aa11.74□□□□□ -0.53
RNF41-202ENST00000394013 DTD1Q8TEA8 209 aa11.74□□□□□ -0.53
RNF41-202ENST00000394013 CA5BP1Q8WTZ4 195 aa11.74□□□□□ -0.53
RNF41-202ENST00000394013 DDB2Q92466 427 aa11.74□□□□□ -0.53
RNF41-202ENST00000394013 EGLN1Q9GZT9 426 aa11.74□□□□□ -0.53
RNF41-202ENST00000394013 SEBOXQ9HB31 216 aaPredicted RBP11.74□□□□□ -0.53
RNF41-202ENST00000394013 UTP20O75691 2785 aaKnown RBP11.73□□□□□ -0.53
RNF41-202ENST00000394013 TRAV38-1A0A0B4J264 116 aa11.73□□□□□ -0.53
RNF41-202ENST00000394013 CEBPZOSA8MTT3 80 aa11.73□□□□□ -0.53
RNF41-202ENST00000394013 DNASE2O00115 360 aaPredicted RBP11.73□□□□□ -0.53
RNF41-202ENST00000394013 DVL1O14640 695 aa11.73□□□□□ -0.53
RNF41-202ENST00000394013 OPN1MWP04001 364 aa11.73□□□□□ -0.53
RNF41-202ENST00000394013 FBP1P09467 338 aa11.73□□□□□ -0.53
RNF41-202ENST00000394013 OPN1MW2P0DN77 364 aa11.73□□□□□ -0.53
RNF41-202ENST00000394013 OPN1MW3P0DN78 364 aa11.73□□□□□ -0.53
RNF41-202ENST00000394013 APOBEC3AP31941 199 aaPredicted RBP11.73□□□□□ -0.53
RNF41-202ENST00000394013 UNQ6494/PRO21346Q6UXR6 183 aa11.73□□□□□ -0.53
RNF41-202ENST00000394013 CBLN2Q8IUK8 224 aa11.73□□□□□ -0.53
RNF41-202ENST00000394013 LILRB2Q8N423 598 aa11.73□□□□□ -0.53
RNF41-202ENST00000394013 NGBQ9NPG2 151 aa11.73□□□□□ -0.53
RNF41-202ENST00000394013 MAP1AP78559 2803 aaPredicted RBP11.73□□□□□ -0.53
RNF41-202ENST00000394013 FLNCQ14315 2725 aa11.73□□□□□ -0.53
RNF41-202ENST00000394013 NKX6-3A6NJ46 265 aa11.72□□□□□ -0.53
RNF41-202ENST00000394013 RAB29O14966 203 aa11.72□□□□□ -0.53
RNF41-202ENST00000394013 ELLP55199 621 aaPredicted RBP11.72□□□□□ -0.53
RNF41-202ENST00000394013 SLC38A11Q08AI6 406 aa11.72□□□□□ -0.53
RNF41-202ENST00000394013 MSMO1Q15800 293 aa11.72□□□□□ -0.53
RNF41-202ENST00000394013 AVPI1Q5T686 147 aa11.72□□□□□ -0.53
RNF41-202ENST00000394013 TMEM14EPQ6UXP3 125 aa11.72□□□□□ -0.53
RNF41-202ENST00000394013 S1PR3Q99500 378 aa11.72□□□□□ -0.53
RNF41-202ENST00000394013 NKX6-2Q9C056 277 aaPredicted RBP11.72□□□□□ -0.53
RNF41-202ENST00000394013 EIF5A2Q9GZV4 153 aaKnown RBP11.72□□□□□ -0.53
RNF41-202ENST00000394013 COA4Q9NYJ1 87 aa11.72□□□□□ -0.53
RNF41-202ENST00000394013 IGHV1-69-2A0A0G2JMI3 117 aa11.72□□□□□ -0.53
RNF41-202ENST00000394013 TNFRSF13BO14836 293 aaPredicted RBP11.72□□□□□ -0.53
RNF41-202ENST00000394013 GUK1Q16774 197 aa11.72□□□□□ -0.53
RNF41-202ENST00000394013 MUC15Q8N387 334 aa11.72□□□□□ -0.53
RNF41-202ENST00000394013 TMEM140Q9NV12 185 aa11.72□□□□□ -0.53
RNF41-202ENST00000394013 RPUSD1Q9UJJ7 312 aaKnown RBP11.72□□□□□ -0.53
RNF41-202ENST00000394013 ZFHX3Q15911 3703 aa11.72□□□□□ -0.53
RNF41-202ENST00000394013 PMS2P5A8MQ11 134 aa11.71□□□□□ -0.53
RNF41-202ENST00000394013 HMGB3O15347 200 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms