RNA–Protein interactions for RNA: ENST00000392004.7

COL6A3-205, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best) BASIC

Gene COL6A3, Length 4,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-205ENST00000392004 ACP7Q6ZNF0 438 aa8.64□□□□□ -1.03
COL6A3-205ENST00000392004 C10orf35Q96D05 121 aa8.64□□□□□ -1.03
COL6A3-205ENST00000392004 GGACTQ9BVM4 153 aa8.64□□□□□ -1.03
COL6A3-205ENST00000392004 IL36GQ9NZH8 169 aa8.64□□□□□ -1.03
COL6A3-205ENST00000392004 IGKV1-12A0A0C4DH73 117 aa8.64□□□□□ -1.03
COL6A3-205ENST00000392004 IGKV1D-12P01611 117 aa8.64□□□□□ -1.03
COL6A3-205ENST00000392004 OR13C7P0DN81 318 aa8.64□□□□□ -1.03
COL6A3-205ENST00000392004 EFNA4P52798 201 aa8.64□□□□□ -1.03
COL6A3-205ENST00000392004 RTL8BQ17RB0 113 aa8.64□□□□□ -1.03
COL6A3-205ENST00000392004 SOHLH1Q5JUK2 328 aa8.64□□□□□ -1.03
COL6A3-205ENST00000392004 NEU4Q8WWR8 484 aaPredicted RBP8.64□□□□□ -1.03
COL6A3-205ENST00000392004 OR10C1Q96KK4 312 aa8.64□□□□□ -1.03
COL6A3-205ENST00000392004 GAR1Q9NY12 217 aaKnown RBP8.64□□□□□ -1.03
COL6A3-205ENST00000392004 FBXO7Q9Y3I1 522 aa8.64□□□□□ -1.03
COL6A3-205ENST00000392004 COL4A2P08572 1712 aa8.63□□□□□ -1.03
COL6A3-205ENST00000392004 IGKV1-27A0A075B6S5 117 aa8.63□□□□□ -1.03
COL6A3-205ENST00000392004 CTXN2P0C2S0 81 aa8.63□□□□□ -1.03
COL6A3-205ENST00000392004 OR8U8P0C7N1 319 aa8.63□□□□□ -1.03
COL6A3-205ENST00000392004 RSPO1Q2MKA7 263 aaPredicted RBP8.63□□□□□ -1.03
COL6A3-205ENST00000392004 ASPHD2Q6ICH7 369 aa8.63□□□□□ -1.03
COL6A3-205ENST00000392004 DUX4L9Q6RFH8 374 aaPredicted RBP8.63□□□□□ -1.03
COL6A3-205ENST00000392004 ZNF709Q8N972 641 aa8.63□□□□□ -1.03
COL6A3-205ENST00000392004 HIF1ANQ9NWT6 349 aa8.63□□□□□ -1.03
COL6A3-205ENST00000392004 IGKV3-7A0A075B6H7 116 aa8.63□□□□□ -1.03
COL6A3-205ENST00000392004 C9JQL5 133 aa8.63□□□□□ -1.03
COL6A3-205ENST00000392004 SOX15O60248 233 aa8.63□□□□□ -1.03
COL6A3-205ENST00000392004 ANKRD55Q3KP44 614 aa8.63□□□□□ -1.03
COL6A3-205ENST00000392004 SPANXN5Q5MJ07 72 aa8.63□□□□□ -1.03
COL6A3-205ENST00000392004 ABHD12Q8N2K0 398 aa8.63□□□□□ -1.03
COL6A3-205ENST00000392004 C5orf66Q9H5L9 145 aa8.63□□□□□ -1.03
COL6A3-205ENST00000392004 CALYQ9NYX4 217 aa8.63□□□□□ -1.03
COL6A3-205ENST00000392004 ZNF835Q9Y2P0 537 aa8.63□□□□□ -1.03
COL6A3-205ENST00000392004 TRAV40A0A0B4J280 105 aa8.63□□□□□ -1.03
COL6A3-205ENST00000392004 LY86O95711 162 aa8.63□□□□□ -1.03
COL6A3-205ENST00000392004 CGAP01215 116 aa8.63□□□□□ -1.03
COL6A3-205ENST00000392004 TMEM33P57088 247 aa8.63□□□□□ -1.03
COL6A3-205ENST00000392004 UNC119Q13432 240 aa8.63□□□□□ -1.03
COL6A3-205ENST00000392004 MPV17LQ2QL34 196 aa8.63□□□□□ -1.03
COL6A3-205ENST00000392004 Q6ZR03 302 aa8.63□□□□□ -1.03
COL6A3-205ENST00000392004 DMRTC2Q8IXT2 367 aaPredicted RBP8.63□□□□□ -1.03
COL6A3-205ENST00000392004 GAPTQ8N292 157 aa8.63□□□□□ -1.03
COL6A3-205ENST00000392004 OR13A1Q8NGR1 328 aa8.63□□□□□ -1.03
COL6A3-205ENST00000392004 IGFBPL1Q8WX77 278 aa8.63□□□□□ -1.03
COL6A3-205ENST00000392004 SLC35D1Q9NTN3 355 aa8.63□□□□□ -1.03
COL6A3-205ENST00000392004 TMEM238LA0A1B0GVL6 79 aa8.62□□□□□ -1.03
COL6A3-205ENST00000392004 GAPDHP04406 335 aaKnown RBP8.62□□□□□ -1.03
COL6A3-205ENST00000392004 HKR1P10072 659 aa8.62□□□□□ -1.03
COL6A3-205ENST00000392004 TMEM11P17152 192 aa8.62□□□□□ -1.03
COL6A3-205ENST00000392004 HNF1AP20823 631 aa8.62□□□□□ -1.03
COL6A3-205ENST00000392004 KLRD1Q13241 179 aa8.62□□□□□ -1.03
COL6A3-205ENST00000392004 ECSCRQ19T08 205 aa8.62□□□□□ -1.03
COL6A3-205ENST00000392004 IZUMO4Q1ZYL8 232 aa8.62□□□□□ -1.03
COL6A3-205ENST00000392004 C1orf174Q8IYL3 243 aa8.62□□□□□ -1.03
COL6A3-205ENST00000392004 GCSAMQ8N6F7 178 aa8.62□□□□□ -1.03
COL6A3-205ENST00000392004 POC1AQ8NBT0 407 aa8.62□□□□□ -1.03
COL6A3-205ENST00000392004 MRGPRFQ96AM1 343 aa8.62□□□□□ -1.03
COL6A3-205ENST00000392004 NUDT16L1Q9BRJ7 211 aaKnown RBP8.62□□□□□ -1.03
COL6A3-205ENST00000392004 UNKLQ9H9P5 680 aaKnown RBP8.62□□□□□ -1.03
COL6A3-205ENST00000392004 ATRQ13535 2644 aa8.62□□□□□ -1.03
COL6A3-205ENST00000392004 MSMO1Q15800 293 aa8.62□□□□□ -1.03
COL6A3-205ENST00000392004 SPRNQ5BIV9 151 aa8.62□□□□□ -1.03
COL6A3-205ENST00000392004 VAX1Q5SQQ9 334 aa8.62□□□□□ -1.03
COL6A3-205ENST00000392004 SLC35G3Q8N808 338 aa8.62□□□□□ -1.03
COL6A3-205ENST00000392004 RNF138Q8WVD3 245 aa8.62□□□□□ -1.03
COL6A3-205ENST00000392004 RBMXL1Q96E39 390 aaKnown RBP8.62□□□□□ -1.03
COL6A3-205ENST00000392004 SNX22Q96L94 193 aa8.62□□□□□ -1.03
COL6A3-205ENST00000392004 SLC35B3Q9H1N7 401 aa8.62□□□□□ -1.03
COL6A3-205ENST00000392004 OR51I2Q9H344 312 aa8.62□□□□□ -1.03
COL6A3-205ENST00000392004 PLEKHA2Q9HB19 425 aa8.62□□□□□ -1.03
COL6A3-205ENST00000392004 DOCK11Q5JSL3 2073 aa8.62□□□□□ -1.03
COL6A3-205ENST00000392004 TRDCB7Z8K6 153 aa8.62□□□□□ -1.03
COL6A3-205ENST00000392004 TOX4O94842 621 aa8.62□□□□□ -1.03
COL6A3-205ENST00000392004 VKORC1L1Q8N0U8 176 aa8.62□□□□□ -1.03
COL6A3-205ENST00000392004 ZNF383Q8NA42 475 aa8.62□□□□□ -1.03
COL6A3-205ENST00000392004 OR5B12Q96R08 314 aa8.62□□□□□ -1.03
COL6A3-205ENST00000392004 DHRS7CA6NNS2 312 aa8.61□□□□□ -1.03
COL6A3-205ENST00000392004 RNF212BA8MTL3 300 aa8.61□□□□□ -1.03
COL6A3-205ENST00000392004 PSPNO60542 156 aa8.61□□□□□ -1.03
COL6A3-205ENST00000392004 LIPFP07098 398 aa8.61□□□□□ -1.03
COL6A3-205ENST00000392004 LYL1P12980 280 aa8.61□□□□□ -1.03
COL6A3-205ENST00000392004 TNXAQ16473 311 aa8.61□□□□□ -1.03
COL6A3-205ENST00000392004 ZNF324BQ6AW86 544 aaPredicted RBP8.61□□□□□ -1.03
COL6A3-205ENST00000392004 SCGB1C1Q8TD33 95 aa8.61□□□□□ -1.03
COL6A3-205ENST00000392004 C19orf12Q9NSK7 152 aa8.61□□□□□ -1.03
COL6A3-205ENST00000392004 STRAPQ9Y3F4 350 aaKnown RBP8.61□□□□□ -1.03
COL6A3-205ENST00000392004 V9GYS6 101 aa8.61□□□□□ -1.03
COL6A3-205ENST00000392004 LOC390937A0A1W2PQ73 354 aa8.61□□□□□ -1.03
COL6A3-205ENST00000392004 FOXH1O75593 365 aa8.61□□□□□ -1.03
COL6A3-205ENST00000392004 IGHV2-5P01817 119 aa8.61□□□□□ -1.03
COL6A3-205ENST00000392004 LFNGQ8NES3 379 aa8.61□□□□□ -1.03
COL6A3-205ENST00000392004 FAM213BQ8TBF2 198 aa8.61□□□□□ -1.03
COL6A3-205ENST00000392004 LINC00527Q9UJ94 153 aa8.61□□□□□ -1.03
COL6A3-205ENST00000392004 DCHS1Q96JQ0 3298 aa8.61□□□□□ -1.03
COL6A3-205ENST00000392004 IGHV3-35A0A0C4DH35 117 aa8.61□□□□□ -1.03
COL6A3-205ENST00000392004 PPYP01298 95 aa8.61□□□□□ -1.03
COL6A3-205ENST00000392004 OR13D1Q8NGV5 346 aa8.61□□□□□ -1.03
COL6A3-205ENST00000392004 TMEM230Q96A57 120 aa8.61□□□□□ -1.03
COL6A3-205ENST00000392004 TSTD3H0UI37 97 aa8.6□□□□□ -1.03
COL6A3-205ENST00000392004 CEACAM3P40198 252 aa8.6□□□□□ -1.03
COL6A3-205ENST00000392004 IL24Q13007 206 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms