RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 TPTE2P1Q5T6R2 138 aa14.88□□□□□ -0.03
SQSTM1-202ENST00000389805 SGMS2Q8NHU3 365 aa14.88□□□□□ -0.03
SQSTM1-202ENST00000389805 WDYHV1Q96HA8 205 aa14.88□□□□□ -0.03
SQSTM1-202ENST00000389805 TECTBQ96PL2 329 aa14.88□□□□□ -0.03
SQSTM1-202ENST00000389805 VAMP8Q9BV40 100 aa14.88□□□□□ -0.03
SQSTM1-202ENST00000389805 TUSC2O75896 110 aa14.88□□□□□ -0.03
SQSTM1-202ENST00000389805 IGKV1-5P01602 117 aa14.88□□□□□ -0.03
SQSTM1-202ENST00000389805 RAB7AP51149 207 aa14.88□□□□□ -0.03
SQSTM1-202ENST00000389805 FGF12P61328 243 aa14.88□□□□□ -0.03
SQSTM1-202ENST00000389805 MMDQ15546 238 aa14.88□□□□□ -0.03
SQSTM1-202ENST00000389805 ZNF114Q8NC26 417 aa14.88□□□□□ -0.03
SQSTM1-202ENST00000389805 MDS2Q8NDY4 140 aa14.88□□□□□ -0.03
SQSTM1-202ENST00000389805 RDH5Q92781 318 aa14.88□□□□□ -0.03
SQSTM1-202ENST00000389805 NAPSAO96009 420 aa14.87□□□□□ -0.03
SQSTM1-202ENST00000389805 PLP2Q04941 152 aa14.87□□□□□ -0.03
SQSTM1-202ENST00000389805 SRSF6Q13247 344 aaKnown RBP14.87□□□□□ -0.03
SQSTM1-202ENST00000389805 NEIL1Q96FI4 390 aaPredicted RBP14.87□□□□□ -0.03
SQSTM1-202ENST00000389805 TMEM204Q9BSN7 226 aa14.87□□□□□ -0.03
SQSTM1-202ENST00000389805 FAM103A1Q9BTL3 118 aaKnown RBP14.87□□□□□ -0.03
SQSTM1-202ENST00000389805 ZDHHC11Q9H8X9 412 aa14.87□□□□□ -0.03
SQSTM1-202ENST00000389805 SPRR3Q9UBC9 169 aa14.87□□□□□ -0.03
SQSTM1-202ENST00000389805 RBM7Q9Y580 266 aaKnown RBP14.87□□□□□ -0.03
SQSTM1-202ENST00000389805 KMT2EQ8IZD2 1858 aa14.87□□□□□ -0.03
SQSTM1-202ENST00000389805 C11orf94C9JXX5 98 aa14.87□□□□□ -0.03
SQSTM1-202ENST00000389805 F2Z2F3 143 aa14.87□□□□□ -0.03
SQSTM1-202ENST00000389805 TRAPPC2LH3BP13 241 aa14.87□□□□□ -0.03
SQSTM1-202ENST00000389805 RHBDL1O75783 438 aa14.87□□□□□ -0.03
SQSTM1-202ENST00000389805 CA6P23280 308 aa14.87□□□□□ -0.03
SQSTM1-202ENST00000389805 ANKRD39Q53RE8 183 aa14.87□□□□□ -0.03
SQSTM1-202ENST00000389805 OR5P3Q8WZ94 311 aa14.87□□□□□ -0.03
SQSTM1-202ENST00000389805 ASCL3Q9NQ33 180 aa14.87□□□□□ -0.03
SQSTM1-202ENST00000389805 KLRC4-KLRK1H3BQV0 150 aa14.86□□□□□ -0.03
SQSTM1-202ENST00000389805 CBLN1P23435 193 aa14.86□□□□□ -0.03
SQSTM1-202ENST00000389805 FFAR4Q5NUL3 377 aa14.86□□□□□ -0.03
SQSTM1-202ENST00000389805 Q8NFD4 153 aa14.86□□□□□ -0.03
SQSTM1-202ENST00000389805 RYDENQ9NUL5 291 aaKnown RBP14.86□□□□□ -0.03
SQSTM1-202ENST00000389805 TP53TG3Q9ULZ0 132 aa14.86□□□□□ -0.03
SQSTM1-202ENST00000389805 SVILO95425 2214 aa14.86□□□□□ -0.03
SQSTM1-202ENST00000389805 CHRNB4P30926 498 aa14.86□□□□□ -0.03
SQSTM1-202ENST00000389805 PCSK4Q6UW60 755 aa14.86□□□□□ -0.03
SQSTM1-202ENST00000389805 Q6ZVH6 145 aa14.86□□□□□ -0.03
SQSTM1-202ENST00000389805 LINC01551Q86U37 167 aa14.86□□□□□ -0.03
SQSTM1-202ENST00000389805 TMEM9BQ9NQ34 198 aa14.86□□□□□ -0.03
SQSTM1-202ENST00000389805 OR1A1Q9P1Q5 309 aa14.86□□□□□ -0.03
SQSTM1-202ENST00000389805 KLF13Q9Y2Y9 288 aaPredicted RBP14.86□□□□□ -0.03
SQSTM1-202ENST00000389805 YPEL1O60688 119 aa14.85□□□□□ -0.03
SQSTM1-202ENST00000389805 SERF1AO75920 110 aa14.85□□□□□ -0.03
SQSTM1-202ENST00000389805 NDUFB4O95168 129 aa14.85□□□□□ -0.03
SQSTM1-202ENST00000389805 CRYABP02511 175 aaKnown RBP14.85□□□□□ -0.03
SQSTM1-202ENST00000389805 CELA3BP08861 270 aa14.85□□□□□ -0.03
SQSTM1-202ENST00000389805 S100GP29377 79 aa14.85□□□□□ -0.03
SQSTM1-202ENST00000389805 ARR3P36575 388 aa14.85□□□□□ -0.03
SQSTM1-202ENST00000389805 RPP30P78346 268 aaKnown RBP14.85□□□□□ -0.03
SQSTM1-202ENST00000389805 TFF3Q07654 80 aa14.85□□□□□ -0.03
SQSTM1-202ENST00000389805 TMEM183BQ1AE95 376 aa14.85□□□□□ -0.03
SQSTM1-202ENST00000389805 MDP1Q86V88 176 aa14.85□□□□□ -0.03
SQSTM1-202ENST00000389805 MKXQ8IYA7 352 aa14.85□□□□□ -0.03
SQSTM1-202ENST00000389805 RNASE8Q8TDE3 154 aaKnown RBP14.85□□□□□ -0.03
SQSTM1-202ENST00000389805 YPEL2Q96QA6 119 aa14.85□□□□□ -0.03
SQSTM1-202ENST00000389805 C20orf144Q9BQM9 153 aa14.85□□□□□ -0.03
SQSTM1-202ENST00000389805 CTXND1A0A1B0GTU2 59 aa14.85□□□□□ -0.03
SQSTM1-202ENST00000389805 SS18L1O75177 396 aaPredicted RBP14.85□□□□□ -0.03
SQSTM1-202ENST00000389805 ATP5G3P48201 142 aa14.85□□□□□ -0.03
SQSTM1-202ENST00000389805 THBS3P49746 956 aa14.85□□□□□ -0.03
SQSTM1-202ENST00000389805 KCNS2Q9ULS6 477 aa14.85□□□□□ -0.03
SQSTM1-202ENST00000389805 CACNA1GO43497 2377 aa14.85□□□□□ -0.03
SQSTM1-202ENST00000389805 SOX8P57073 446 aa14.85□□□□□ -0.03
SQSTM1-202ENST00000389805 LINC00310P59036 64 aa14.85□□□□□ -0.03
SQSTM1-202ENST00000389805 ARG2P78540 354 aa14.85□□□□□ -0.03
SQSTM1-202ENST00000389805 RNPS1Q15287 305 aaKnown RBP14.85□□□□□ -0.03
SQSTM1-202ENST00000389805 TEX43Q6ZNM6 134 aa14.85□□□□□ -0.03
SQSTM1-202ENST00000389805 GCNT2Q8N0V5 402 aa14.85□□□□□ -0.03
SQSTM1-202ENST00000389805 ZNF709Q8N972 641 aa14.85□□□□□ -0.03
SQSTM1-202ENST00000389805 RNF114Q9Y508 228 aa14.85□□□□□ -0.03
SQSTM1-202ENST00000389805 ATP23Q9Y6H3 246 aa14.85□□□□□ -0.03
SQSTM1-202ENST00000389805 RBFOX2O43251 390 aaKnown RBP eCLIP14.84□□□□□ -0.034e-14■■■□□ 14.6
SQSTM1-202ENST00000389805 TPPP2P59282 170 aa14.84□□□□□ -0.03
SQSTM1-202ENST00000389805 LCN2P80188 198 aa14.84□□□□□ -0.03
SQSTM1-202ENST00000389805 FER1L6-AS2Q96M78 137 aa14.84□□□□□ -0.03
SQSTM1-202ENST00000389805 SAMD10Q9BYL1 202 aa14.84□□□□□ -0.03
SQSTM1-202ENST00000389805 CACNA1DQ01668 2161 aa14.84□□□□□ -0.03
SQSTM1-202ENST00000389805 TRAV34A0A0B4J273 112 aa14.84□□□□□ -0.03
SQSTM1-202ENST00000389805 KIR2DS1A0A191URI9 304 aa14.84□□□□□ -0.03
SQSTM1-202ENST00000389805 WDR1O75083 606 aa14.84□□□□□ -0.03
SQSTM1-202ENST00000389805 KIR2DS4P43632 304 aa14.84□□□□□ -0.03
SQSTM1-202ENST00000389805 KIR2DS1Q14954 304 aa14.84□□□□□ -0.03
SQSTM1-202ENST00000389805 COL5A1-AS1Q5SY13 56 aa14.84□□□□□ -0.03
SQSTM1-202ENST00000389805 OR5A2Q8NGI9 324 aa14.84□□□□□ -0.03
SQSTM1-202ENST00000389805 CIB3Q96Q77 187 aaPredicted RBP14.84□□□□□ -0.03
SQSTM1-202ENST00000389805 OR2W1Q9Y3N9 320 aa14.84□□□□□ -0.03
SQSTM1-202ENST00000389805 WNT2P09544 360 aa14.83□□□□□ -0.03
SQSTM1-202ENST00000389805 CD46P15529 392 aa14.83□□□□□ -0.03
SQSTM1-202ENST00000389805 KRTDAPP60985 99 aa14.83□□□□□ -0.03
SQSTM1-202ENST00000389805 GNB1P62873 340 aa14.83□□□□□ -0.03
SQSTM1-202ENST00000389805 ARL6IP6Q8N6S5 226 aa14.83□□□□□ -0.03
SQSTM1-202ENST00000389805 ELOVL5Q9NYP7 299 aa14.83□□□□□ -0.03
SQSTM1-202ENST00000389805 GTF3C1Q12789 2109 aa14.83□□□□□ -0.04
SQSTM1-202ENST00000389805 TRGV5A0A0B4J1U4 118 aa14.83□□□□□ -0.04
SQSTM1-202ENST00000389805 AQP7O14520 342 aa14.83□□□□□ -0.04
SQSTM1-202ENST00000389805 FRMD6-AS1P0C7T7 363 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms