RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 PLLPQ9Y342 182 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 GMEB1Q9Y692 573 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 ANKRD36CQ5JPF3 1778 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 SCRIBQ14160 1630 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 A2ML1A8K2U0 1454 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 XRN1Q8IZH2 1706 aaKnown RBP-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 OVOS2A0A0G2JMS6 1433 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 OVOS2A0A0J9YW53 1432 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 MYOM3Q5VTT5 1437 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 OVOS2Q6IE36 1432 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 KIAA1107Q9UPP5 1409 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 TRAV17A0A0B4J275 112 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 PRAMEF26H0Y7S4 382 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 KLRC4-KLRK1H3BQV0 150 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 SULT1C2O00338 296 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 SDHDO14521 159 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 ORC5O43913 435 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 GMDSO60547 372 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 STX11O75558 287 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 EIF3JO75822 258 aaKnown RBP-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 IDH1O75874 414 aaKnown RBP-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 ATP6V1G2O95670 118 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR2H2O95918 312 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 PDYNP01213 254 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 IFNA7P01567 189 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 FGF1P05230 155 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 MGPP08493 103 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 UBBP0CG47 229 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR8G3PP0DMU2 310 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 CXCR2P25025 360 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 PSMB9P28065 219 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 GJB2P29033 226 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 PHBP35232 272 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 GRK6P43250 576 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 HAAOP46952 286 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 DAP3P51398 398 aaKnown RBP-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 HSPA2P54652 639 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 UBE2HP62256 183 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 ARG2P78540 354 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 GABPB1Q06547 395 aaPredicted RBP-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 TMED1Q13445 227 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 EIF2B1Q14232 305 aaKnown RBP-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 TMEM41BQ5BJD5 291 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 C1orf100Q5SVJ3 147 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 C1QTNF12Q5T7M4 302 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 LYRM7Q5U5X0 104 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 SDHAF4Q5VUM1 108 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 TEX261Q6UWH6 196 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 BTNL3Q6UXE8 466 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 SLC22A16Q86VW1 577 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 SLC13A5Q86YT5 568 aaPredicted RBP-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 UMODL1-AS1Q8N2C9 162 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 GUF1Q8N442 669 aaKnown RBP-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 ATPAF2Q8N5M1 289 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 METTL13Q8N6R0 699 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 LINC00469Q8N7U9 141 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 YIPF7Q8N8F6 280 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR8G5Q8NG78 346 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR4C5Q8NGB2 326 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR4K5Q8NGD3 323 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 PPTC7Q8NI37 304 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 CA5BP1Q8WTZ4 195 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 PTPMT1Q8WUK0 201 aaPredicted RBP-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 MRPL53Q96EL3 112 aaKnown RBP-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 C9orf72Q96LT7 481 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 VSTM2LQ96N03 204 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 GBP5Q96PP8 586 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 ITPAQ9BY32 194 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 SAMD10Q9BYL1 202 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 DERL2Q9GZP9 239 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 POLR3FQ9H1D9 316 aaPredicted RBP-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 FOLH1BQ9HBA9 442 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 NPVFQ9HCQ7 196 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 DDX19AQ9NUU7 478 aaKnown RBP-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 ANO10Q9NW15 660 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 THUMPD1Q9NXG2 353 aaKnown RBP-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 QPCTLQ9NXS2 382 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 RASL12Q9NYN1 266 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 MAT2BQ9NZL9 334 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 TCEAL9Q9UHQ7 104 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 LAMP5Q9UJQ1 280 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 ANAPC10Q9UM13 185 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 UFC1Q9Y3C8 167 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 PEX16Q9Y5Y5 336 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 LY96Q9Y6Y9 160 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 MYO5BQ9ULV0 1848 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 TCOF1Q13428 1488 aaKnown RBP-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 PLB1Q6P1J6 1458 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 FGD5Q6ZNL6 1462 aa-1.97□□□□□ -2.72
RNU6-540P-201ENST00000384622 KIAA1551Q9HCM1 1747 aa-1.97□□□□□ -2.73
RNU6-540P-201ENST00000384622 PLIN4Q96Q06 1357 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 CC2D2AQ9P2K1 1620 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 KDM6AO15550 1401 aaPredicted RBP-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 UHRF1BP1LA0JNW5 1464 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 TRAV8-7A0A075B6U6 113 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 TRBV10-3A0A0K0K1G6 114 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 A0A1W2PPW3 197 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 TCRBV4S1A1TA0A5B7 111 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 CCDC160A6NGH7 325 aa-1.98□□□□□ -2.73
RNU6-540P-201ENST00000384622 PPP5D1E7EU14 171 aa-1.98□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms