RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 DEFB133Q30KQ1 61 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 ABCA11PQ4W5N1 156 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 OR10J3Q5JRS4 329 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 ZNF324BQ6AW86 544 aaPredicted RBP6.33□□□□□ -1.4
CDKL5-201ENST00000379989 SPATA12Q7Z6I5 190 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 BOD1L2Q8IYS8 172 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 OR4N2Q8NGD1 307 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 OR1L3Q8NH93 324 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 SAP25Q8TEE9 199 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 TSKUQ8WUA8 353 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 MED12LQ86YW9 2145 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 THADAQ6YHU6 1953 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 SNURFLB1AK76 121 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 TNFRSF13BO14836 293 aaPredicted RBP6.33□□□□□ -1.4
CDKL5-201ENST00000379989 HMGB3O15347 200 aaKnown RBP6.33□□□□□ -1.4
CDKL5-201ENST00000379989 ZNF207O43670 478 aaKnown RBP6.33□□□□□ -1.4
CDKL5-201ENST00000379989 CNIH1O95406 144 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 VDAC1P21796 283 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 NPY1RP25929 384 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 SSTR5P35346 364 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 IER3P46695 156 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 SGCBQ16585 318 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 NRN1LQ496H8 165 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 EBLN2Q6P2I7 272 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 FAM57BQ71RH2 274 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 MTURNQ8N3F0 131 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 SLC25A45Q8N413 288 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 OR5D14Q8NGL3 314 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 TMEM45BQ96B21 275 aa6.33□□□□□ -1.4
CDKL5-201ENST00000379989 CDX2Q99626 313 aaPredicted RBP6.33□□□□□ -1.4
CDKL5-201ENST00000379989 NAA38Q9BRA0 125 aaKnown RBP6.33□□□□□ -1.4
CDKL5-201ENST00000379989 PNRC2Q9NPJ4 139 aaKnown RBP6.33□□□□□ -1.4
CDKL5-201ENST00000379989 A0A087X0K7 114 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 LOC102723996A0A087X1L8 192 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 PSMB11A5LHX3 300 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 TMEM189A5PLL7 270 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 TGFBR3LH3BV60 316 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 PHF1O43189 567 aaPredicted RBP6.32□□□□□ -1.4
CDKL5-201ENST00000379989 RHBDL1O75783 438 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 CLDN1O95832 211 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 IGKV1D-33P01593 117 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 IGKV1-33P01594 117 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 IGKV1D-16P01601 117 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 CELA3AP09093 270 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 FTH1P19P0C7X4 201 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 OR3A4PP47883 348 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 TFF2Q03403 129 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 PLCXD2Q0VAA5 305 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 EIF3IQ13347 325 aaKnown RBP6.32□□□□□ -1.4
CDKL5-201ENST00000379989 GABRA6Q16445 453 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 TBR1Q16650 682 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 ZNF542PQ5EBM4 170 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 OR2K2Q8NGT1 345 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 NEIL1Q96FI4 390 aaPredicted RBP6.32□□□□□ -1.4
CDKL5-201ENST00000379989 COMMD5Q9GZQ3 224 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 MMP25Q9NPA2 562 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 JKAMPQ9P055 326 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 R4GMQ9 66 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 COL6A3P12111 3177 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 F5P12259 2224 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 C9orf118A6NHY6 69 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 NXPH3O95157 252 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 SERPINE2P07093 398 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 PF4V1P10720 104 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 SLC25A6P12236 298 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 EGR1P18146 543 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 ID1P41134 155 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 NPBWR2P48146 333 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 PAX9P55771 341 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 GFERP55789 205 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 TGFBR3Q03167 851 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 SLC23A3Q6PIS1 610 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 SLC25A34Q6PIV7 304 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 LHFPL2Q6ZUX7 228 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 RPP25LQ8N5L8 163 aaKnown RBP6.32□□□□□ -1.4
CDKL5-201ENST00000379989 RLN3Q8WXF3 142 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 MBD6Q96DN6 1003 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 SFXN3Q9BWM7 321 aa6.32□□□□□ -1.4
CDKL5-201ENST00000379989 IGKV1D-42A0A075B6H8 117 aa6.31□□□□□ -1.4
CDKL5-201ENST00000379989 FOXI3A8MTJ6 420 aaPredicted RBP6.31□□□□□ -1.4
CDKL5-201ENST00000379989 H3BUT2 72 aa6.31□□□□□ -1.4
CDKL5-201ENST00000379989 TMPRSS2O15393 492 aa6.31□□□□□ -1.4
CDKL5-201ENST00000379989 GPM6AP51674 278 aa6.31□□□□□ -1.4
CDKL5-201ENST00000379989 OR1D5P58170 312 aa6.31□□□□□ -1.4
CDKL5-201ENST00000379989 PPP1CAP62136 330 aa6.31□□□□□ -1.4
CDKL5-201ENST00000379989 ZXDAP98168 799 aa6.31□□□□□ -1.4
CDKL5-201ENST00000379989 ZNF90Q03938 601 aa6.31□□□□□ -1.4
CDKL5-201ENST00000379989 TMEM164Q5U3C3 297 aa6.31□□□□□ -1.4
CDKL5-201ENST00000379989 KCTD18Q6PI47 426 aaPredicted RBP6.31□□□□□ -1.4
CDKL5-201ENST00000379989 OR10G8Q8NGN5 311 aa6.31□□□□□ -1.4
CDKL5-201ENST00000379989 DPF1Q92782 380 aa6.31□□□□□ -1.4
CDKL5-201ENST00000379989 FOXQ1Q9C009 403 aa6.31□□□□□ -1.4
CDKL5-201ENST00000379989 GP6Q9HCN6 339 aa6.31□□□□□ -1.4
CDKL5-201ENST00000379989 SLC39A9Q9NUM3 307 aa6.31□□□□□ -1.4
CDKL5-201ENST00000379989 ERRFI1Q9UJM3 462 aaPredicted RBP6.31□□□□□ -1.4
CDKL5-201ENST00000379989 MCTS1Q9ULC4 181 aaKnown RBP6.31□□□□□ -1.4
CDKL5-201ENST00000379989 ANKRD30BLA7E2S9 258 aa6.31□□□□□ -1.4
CDKL5-201ENST00000379989 NPIPA5E9PKD4 350 aa6.31□□□□□ -1.4
CDKL5-201ENST00000379989 NPIPA3F8WFD2 350 aa6.31□□□□□ -1.4
CDKL5-201ENST00000379989 DNPH1O43598 174 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms