RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 CASTOR1Q8WTX7 329 aa18.47■□□□□ 0.55
HLA-C-202ENST00000376237 MITD1Q8WV92 249 aa18.47■□□□□ 0.55
HLA-C-202ENST00000376237 CFHR4Q92496 578 aa18.47■□□□□ 0.55
HLA-C-202ENST00000376237 PHB2Q99623 299 aa18.47■□□□□ 0.55
HLA-C-202ENST00000376237 A0A0A6YYJ9 748 aa18.46■□□□□ 0.55
HLA-C-202ENST00000376237 A0A0B4J2A0 478 aa18.46■□□□□ 0.55
HLA-C-202ENST00000376237 VGLL3A8MV65 326 aa18.46■□□□□ 0.55
HLA-C-202ENST00000376237 CDS2O95674 445 aa18.46■□□□□ 0.55
HLA-C-202ENST00000376237 HPRT1P00492 218 aa18.46■□□□□ 0.55
HLA-C-202ENST00000376237 AANATQ16613 207 aa18.46■□□□□ 0.55
HLA-C-202ENST00000376237 ZNF585BQ52M93 769 aa18.46■□□□□ 0.55
HLA-C-202ENST00000376237 OR2B11Q5JQS5 317 aa18.46■□□□□ 0.55
HLA-C-202ENST00000376237 LGI3Q8N145 548 aa18.46■□□□□ 0.55
HLA-C-202ENST00000376237 OR52B4Q8NGK2 314 aa18.46■□□□□ 0.55
HLA-C-202ENST00000376237 IL22RA2Q969J5 263 aa18.46■□□□□ 0.55
HLA-C-202ENST00000376237 TMEM56Q96MV1 263 aa18.46■□□□□ 0.55
HLA-C-202ENST00000376237 PLEKHA2Q9HB19 425 aa18.46■□□□□ 0.55
HLA-C-202ENST00000376237 SHPKQ9UHJ6 478 aa18.46■□□□□ 0.55
HLA-C-202ENST00000376237 TMEM56-RWDD3S4R434 201 aa18.46■□□□□ 0.55
HLA-C-202ENST00000376237 A0A0B4J293 547 aa18.45■□□□□ 0.54
HLA-C-202ENST00000376237 RAMP3O60896 148 aa18.45■□□□□ 0.54
HLA-C-202ENST00000376237 SCGB2A2Q13296 93 aa18.45■□□□□ 0.54
HLA-C-202ENST00000376237 THNSL2Q86YJ6 484 aa18.45■□□□□ 0.54
HLA-C-202ENST00000376237 LRTM2Q8N967 370 aa18.45■□□□□ 0.54
HLA-C-202ENST00000376237 OR4C13Q8NGP0 309 aa18.45■□□□□ 0.54
HLA-C-202ENST00000376237 FLYWCH2Q96CP2 140 aaKnown RBP18.45■□□□□ 0.54
HLA-C-202ENST00000376237 AIFM2Q9BRQ8 373 aa18.45■□□□□ 0.54
HLA-C-202ENST00000376237 ALG5Q9Y673 324 aa18.45■□□□□ 0.54
HLA-C-202ENST00000376237 IGHV3-72A0A0B4J1Y9 119 aa18.44■□□□□ 0.54
HLA-C-202ENST00000376237 ATG12O94817 140 aa18.44■□□□□ 0.54
HLA-C-202ENST00000376237 LPAR6P43657 344 aa18.44■□□□□ 0.54
HLA-C-202ENST00000376237 ZNF695Q8IW36 515 aa18.44■□□□□ 0.54
HLA-C-202ENST00000376237 C12orf45Q8N5I9 185 aaPredicted RBP18.44■□□□□ 0.54
HLA-C-202ENST00000376237 OSR1Q8TAX0 266 aaPredicted RBP18.44■□□□□ 0.54
HLA-C-202ENST00000376237 RNF5Q99942 180 aa18.44■□□□□ 0.54
HLA-C-202ENST00000376237 CDC42EP3Q9UKI2 254 aa18.44■□□□□ 0.54
HLA-C-202ENST00000376237 FAM90A9PA6NNJ1 464 aa18.44■□□□□ 0.54
HLA-C-202ENST00000376237 VENTXO95231 258 aa18.44■□□□□ 0.54
HLA-C-202ENST00000376237 CRYZL1O95825 349 aa18.44■□□□□ 0.54
HLA-C-202ENST00000376237 TMEM177Q53S58 311 aa18.44■□□□□ 0.54
HLA-C-202ENST00000376237 RBPMSQ93062 196 aaKnown RBP18.44■□□□□ 0.54
HLA-C-202ENST00000376237 OR51J1Q9H342 316 aa18.44■□□□□ 0.54
HLA-C-202ENST00000376237 COMMD9Q9P000 198 aa18.44■□□□□ 0.54
HLA-C-202ENST00000376237 IGKV1-16P04430 117 aa18.43■□□□□ 0.54
HLA-C-202ENST00000376237 FAM106CPP0CH98 169 aa18.43■□□□□ 0.54
HLA-C-202ENST00000376237 PAX6P26367 422 aa18.43■□□□□ 0.54
HLA-C-202ENST00000376237 EBI3Q14213 229 aa18.43■□□□□ 0.54
HLA-C-202ENST00000376237 ANKRD55Q3KP44 614 aa18.43■□□□□ 0.54
HLA-C-202ENST00000376237 BCL6BQ8N143 479 aaPredicted RBP18.43■□□□□ 0.54
HLA-C-202ENST00000376237 OR2T10Q8NGZ9 312 aa18.43■□□□□ 0.54
HLA-C-202ENST00000376237 DUXBA0A1W2PPF3 345 aa18.42■□□□□ 0.54
HLA-C-202ENST00000376237 HRASP01112 189 aa18.42■□□□□ 0.54
HLA-C-202ENST00000376237 LGALS7P47929 136 aa18.42■□□□□ 0.54
HLA-C-202ENST00000376237 LRRC75BQ2VPJ9 315 aa18.42■□□□□ 0.54
HLA-C-202ENST00000376237 DEFB112Q30KQ8 113 aa18.42■□□□□ 0.54
HLA-C-202ENST00000376237 IL17RELQ6ZVW7 336 aa18.42■□□□□ 0.54
HLA-C-202ENST00000376237 PRDM13Q9H4Q3 707 aa18.42■□□□□ 0.54
HLA-C-202ENST00000376237 TLN2Q9Y4G6 2542 aa18.41■□□□□ 0.54
HLA-C-202ENST00000376237 S1PR2O95136 353 aa18.41■□□□□ 0.54
HLA-C-202ENST00000376237 MOSP00540 346 aa18.41■□□□□ 0.54
HLA-C-202ENST00000376237 NQO2P16083 231 aa18.41■□□□□ 0.54
HLA-C-202ENST00000376237 TMEM268Q5VZI3 342 aa18.41■□□□□ 0.54
HLA-C-202ENST00000376237 SELENOHQ8IZQ5 122 aaKnown RBP18.41■□□□□ 0.54
HLA-C-202ENST00000376237 C22orf15Q8WYQ4 148 aa18.41■□□□□ 0.54
HLA-C-202ENST00000376237 SSX3Q99909 188 aa18.41■□□□□ 0.54
HLA-C-202ENST00000376237 SOX21Q9Y651 276 aaPredicted RBP18.41■□□□□ 0.54
HLA-C-202ENST00000376237 CELSR1Q9NYQ6 3014 aa18.4■□□□□ 0.54
HLA-C-202ENST00000376237 SHOXO15266 292 aa18.4■□□□□ 0.54
HLA-C-202ENST00000376237 SSNA1O43805 119 aa18.4■□□□□ 0.54
HLA-C-202ENST00000376237 IGKV1D-33P01593 117 aa18.4■□□□□ 0.54
HLA-C-202ENST00000376237 IGKV1-33P01594 117 aa18.4■□□□□ 0.54
HLA-C-202ENST00000376237 SNRNP70P08621 437 aaKnown RBP18.4■□□□□ 0.54
HLA-C-202ENST00000376237 RPS16P62249 146 aaKnown RBP18.4■□□□□ 0.54
HLA-C-202ENST00000376237 LHFPL5Q8TAF8 219 aa18.4■□□□□ 0.54
HLA-C-202ENST00000376237 PRR13Q9NZ81 148 aa18.4■□□□□ 0.54
HLA-C-202ENST00000376237 IGKV1-39P01597 117 aa18.39■□□□□ 0.54
HLA-C-202ENST00000376237 IGKV1D-39P04432 117 aa18.39■□□□□ 0.54
HLA-C-202ENST00000376237 HES1Q14469 280 aa18.39■□□□□ 0.54
HLA-C-202ENST00000376237 UXS1Q8NBZ7 420 aa18.39■□□□□ 0.54
HLA-C-202ENST00000376237 ZDHHC16Q969W1 377 aa18.39■□□□□ 0.54
HLA-C-202ENST00000376237 R3HDM4Q96D70 268 aa18.39■□□□□ 0.54
HLA-C-202ENST00000376237 EAF1Q96JC9 268 aaPredicted RBP18.39■□□□□ 0.54
HLA-C-202ENST00000376237 HARBI1Q96MB7 349 aa18.39■□□□□ 0.54
HLA-C-202ENST00000376237 TSNAXQ99598 290 aaKnown RBP18.39■□□□□ 0.54
HLA-C-202ENST00000376237 DBX1A6NMT0 343 aa18.39■□□□□ 0.53
HLA-C-202ENST00000376237 KRASP01116 189 aa18.39■□□□□ 0.53
HLA-C-202ENST00000376237 VDAC1P21796 283 aa18.39■□□□□ 0.53
HLA-C-202ENST00000376237 ERVK-16P61578 105 aa18.39■□□□□ 0.53
HLA-C-202ENST00000376237 POU2AF1Q16633 256 aa18.39■□□□□ 0.53
HLA-C-202ENST00000376237 TUSC1Q2TAM9 212 aa18.39■□□□□ 0.53
HLA-C-202ENST00000376237 LIN54Q6MZP7 749 aa18.39■□□□□ 0.53
HLA-C-202ENST00000376237 CADM3Q8N126 398 aa18.39■□□□□ 0.53
HLA-C-202ENST00000376237 SLC35G3Q8N808 338 aa18.39■□□□□ 0.53
HLA-C-202ENST00000376237 RRNAD1Q96FB5 475 aaKnown RBP18.39■□□□□ 0.53
HLA-C-202ENST00000376237 SEC22AQ96IW7 307 aa18.39■□□□□ 0.53
HLA-C-202ENST00000376237 GSX1Q9H4S2 264 aaPredicted RBP18.39■□□□□ 0.53
HLA-C-202ENST00000376237 RAB18Q9NP72 206 aa18.39■□□□□ 0.53
HLA-C-202ENST00000376237 TMED3Q9Y3Q3 217 aa18.39■□□□□ 0.53
HLA-C-202ENST00000376237 HIVEP1P15822 2718 aa18.38■□□□□ 0.53
HLA-C-202ENST00000376237 MARCH11A6NNE9 402 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms