RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 ID3Q02535 119 aa8.78□□□□□ -1
CD28-202ENST00000374481 LRTM2Q8N967 370 aa8.78□□□□□ -1
CD28-202ENST00000374481 OCC1Q8TAD7 63 aa8.78□□□□□ -1
CD28-202ENST00000374481 A0A1B0GW15 77 aa8.78□□□□□ -1
CD28-202ENST00000374481 FAM90A26D6RGX4 464 aa8.78□□□□□ -1
CD28-202ENST00000374481 DUX1O43812 170 aa8.78□□□□□ -1
CD28-202ENST00000374481 OR2J3O76001 311 aa8.78□□□□□ -1
CD28-202ENST00000374481 TYMSP04818 313 aa8.78□□□□□ -1
CD28-202ENST00000374481 RBM11P57052 281 aaKnown RBP8.78□□□□□ -1
CD28-202ENST00000374481 TDRG1Q3Y452 100 aa8.78□□□□□ -1
CD28-202ENST00000374481 SAMD5Q5TGI4 173 aa8.78□□□□□ -1
CD28-202ENST00000374481 PLXDC1Q8IUK5 500 aa8.78□□□□□ -1
CD28-202ENST00000374481 CHRNA10Q9GZZ6 450 aa8.78□□□□□ -1
CD28-202ENST00000374481 AP5S1Q9NUS5 200 aa8.78□□□□□ -1
CD28-202ENST00000374481 TDRD6O60522 2096 aaKnown RBP8.78□□□□□ -1
CD28-202ENST00000374481 MED12Q93074 2177 aa8.78□□□□□ -1
CD28-202ENST00000374481 KLF7O75840 302 aaPredicted RBP8.77□□□□□ -1
CD28-202ENST00000374481 TIMP3P35625 211 aa8.77□□□□□ -1
CD28-202ENST00000374481 MRPL43Q8N983 215 aaKnown RBP8.77□□□□□ -1
CD28-202ENST00000374481 HIST1H4GQ99525 98 aa8.77□□□□□ -1
CD28-202ENST00000374481 CDX2Q99626 313 aaPredicted RBP8.77□□□□□ -1
CD28-202ENST00000374481 GP6Q9HCN6 339 aa8.77□□□□□ -1
CD28-202ENST00000374481 IGHV3-15A0A0B4J1V0 119 aa8.77□□□□□ -1.01
CD28-202ENST00000374481 KBTBD11-OT1A0A1B0GTJ5 212 aa8.77□□□□□ -1.01
CD28-202ENST00000374481 LOC389332A0A1B0GUA5 103 aa8.77□□□□□ -1.01
CD28-202ENST00000374481 FAM231BA6NCW3 169 aa8.77□□□□□ -1.01
CD28-202ENST00000374481 HES3Q5TGS1 186 aa8.77□□□□□ -1.01
CD28-202ENST00000374481 FGFRL1Q8N441 504 aa8.77□□□□□ -1.01
CD28-202ENST00000374481 hDV102S1A0JD36 115 aa8.77□□□□□ -1.01
CD28-202ENST00000374481 G3V3Y1 287 aa8.77□□□□□ -1.01
CD28-202ENST00000374481 LYPD3O95274 346 aa8.77□□□□□ -1.01
CD28-202ENST00000374481 CEBPBP17676 345 aa8.77□□□□□ -1.01
CD28-202ENST00000374481 GPR6P46095 362 aaPredicted RBP8.77□□□□□ -1.01
CD28-202ENST00000374481 SUMO3P55854 103 aaPredicted RBP8.77□□□□□ -1.01
CD28-202ENST00000374481 SLC35E4Q6ICL7 350 aa8.77□□□□□ -1.01
CD28-202ENST00000374481 TMEM144Q7Z5S9 345 aa8.77□□□□□ -1.01
CD28-202ENST00000374481 C5orf17Q8NAS9 161 aa8.77□□□□□ -1.01
CD28-202ENST00000374481 MRGPRX1Q96LB2 322 aa8.77□□□□□ -1.01
CD28-202ENST00000374481 RTL8AQ9BWD3 113 aa8.77□□□□□ -1.01
CD28-202ENST00000374481 CLEC7AQ9BXN2 247 aa8.77□□□□□ -1.01
CD28-202ENST00000374481 NPCDR1Q9BY65 106 aa8.77□□□□□ -1.01
CD28-202ENST00000374481 IGKV1D-8A0A087WSZ0 117 aa8.77□□□□□ -1.01
CD28-202ENST00000374481 FAM181BA6NEQ2 426 aa8.77□□□□□ -1.01
CD28-202ENST00000374481 MMP23AO75900 390 aa8.77□□□□□ -1.01
CD28-202ENST00000374481 SUB1P53999 127 aaKnown RBP eCLIP8.77□□□□□ -1.01
CD28-202ENST00000374481 LSM10Q969L4 123 aaKnown RBP8.77□□□□□ -1.01
CD28-202ENST00000374481 PLPPR2Q96GM1 343 aa8.77□□□□□ -1.01
CD28-202ENST00000374481 PKIBQ9C010 78 aa8.77□□□□□ -1.01
CD28-202ENST00000374481 NPVFQ9HCQ7 196 aa8.77□□□□□ -1.01
CD28-202ENST00000374481 TSSC4Q9Y5U2 329 aaPredicted RBP8.77□□□□□ -1.01
CD28-202ENST00000374481 TPRP12270 2363 aaKnown RBP8.76□□□□□ -1.01
CD28-202ENST00000374481 COL11A1P12107 1806 aaPredicted RBP8.76□□□□□ -1.01
CD28-202ENST00000374481 COL4A5P29400 1685 aa8.76□□□□□ -1.01
CD28-202ENST00000374481 A0A0U1RQV5 110 aa8.76□□□□□ -1.01
CD28-202ENST00000374481 GALR2O43603 387 aaPredicted RBP8.76□□□□□ -1.01
CD28-202ENST00000374481 ASPHD2Q6ICH7 369 aa8.76□□□□□ -1.01
CD28-202ENST00000374481 COX14Q96I36 57 aa8.76□□□□□ -1.01
CD28-202ENST00000374481 ZNF355PQ9NSJ1 428 aa8.76□□□□□ -1.01
CD28-202ENST00000374481 FAM157AC9JC47 383 aa8.76□□□□□ -1.01
CD28-202ENST00000374481 NGFP01138 241 aa8.76□□□□□ -1.01
CD28-202ENST00000374481 GCHFRP30047 84 aa8.76□□□□□ -1.01
CD28-202ENST00000374481 ERHP84090 104 aaKnown RBP8.76□□□□□ -1.01
CD28-202ENST00000374481 TMEM116Q8NCL8 245 aa8.76□□□□□ -1.01
CD28-202ENST00000374481 MRAP2Q96G30 205 aa8.76□□□□□ -1.01
CD28-202ENST00000374481 TMEM56-RWDD3S4R434 201 aa8.76□□□□□ -1.01
CD28-202ENST00000374481 ZNF236Q9UL36 1845 aa8.76□□□□□ -1.01
CD28-202ENST00000374481 A0A0A6YYD4 124 aa8.76□□□□□ -1.01
CD28-202ENST00000374481 IGHV2-26A0A0B4J1V2 119 aa8.76□□□□□ -1.01
CD28-202ENST00000374481 H0YIG0 161 aa8.76□□□□□ -1.01
CD28-202ENST00000374481 RPS20P60866 119 aaKnown RBP8.76□□□□□ -1.01
CD28-202ENST00000374481 KCNMB1Q16558 191 aa8.76□□□□□ -1.01
CD28-202ENST00000374481 TMEM249Q2WGJ8 235 aa8.76□□□□□ -1.01
CD28-202ENST00000374481 ANKRD33Q7Z3H0 272 aa8.76□□□□□ -1.01
CD28-202ENST00000374481 RPP25LQ8N5L8 163 aaKnown RBP8.76□□□□□ -1.01
CD28-202ENST00000374481 OR1L4Q8NGR5 311 aa8.76□□□□□ -1.01
CD28-202ENST00000374481 POM121L2Q96KW2 1035 aa8.76□□□□□ -1.01
CD28-202ENST00000374481 COMMD5Q9GZQ3 224 aa8.76□□□□□ -1.01
CD28-202ENST00000374481 DUSP15Q9H1R2 295 aaPredicted RBP8.76□□□□□ -1.01
CD28-202ENST00000374481 SAP30O75446 220 aa8.75□□□□□ -1.01
CD28-202ENST00000374481 Q0VG73 95 aa8.75□□□□□ -1.01
CD28-202ENST00000374481 MS4A6AQ9H2W1 248 aa8.75□□□□□ -1.01
CD28-202ENST00000374481 PSG11Q9UQ72 335 aa8.75□□□□□ -1.01
CD28-202ENST00000374481 TMEM238LA0A1B0GVL6 79 aa8.75□□□□□ -1.01
CD28-202ENST00000374481 A6NJY4 79 aa8.75□□□□□ -1.01
CD28-202ENST00000374481 H0Y8X5 98 aa8.75□□□□□ -1.01
CD28-202ENST00000374481 DNPH1O43598 174 aa8.75□□□□□ -1.01
CD28-202ENST00000374481 ZG16O60844 167 aa8.75□□□□□ -1.01
CD28-202ENST00000374481 APOMO95445 188 aa8.75□□□□□ -1.01
CD28-202ENST00000374481 SP1P08047 785 aa8.75□□□□□ -1.01
CD28-202ENST00000374481 ZNF32P17041 273 aa8.75□□□□□ -1.01
CD28-202ENST00000374481 EGR4Q05215 589 aa8.75□□□□□ -1.01
CD28-202ENST00000374481 SPEM2Q0P670 501 aa8.75□□□□□ -1.01
CD28-202ENST00000374481 RTN4RL2Q86UN3 420 aa8.75□□□□□ -1.01
CD28-202ENST00000374481 PDPNQ86YL7 162 aa8.75□□□□□ -1.01
CD28-202ENST00000374481 OR4X2Q8NGF9 303 aa8.75□□□□□ -1.01
CD28-202ENST00000374481 RFESDQ8TAC1 157 aa8.75□□□□□ -1.01
CD28-202ENST00000374481 KLHDC3Q9BQ90 382 aa8.75□□□□□ -1.01
CD28-202ENST00000374481 TM2D1Q9BX74 207 aa8.75□□□□□ -1.01
CD28-202ENST00000374481 RSPO3Q9BXY4 272 aaPredicted RBP8.75□□□□□ -1.01
CD28-202ENST00000374481 NHP2Q9NX24 153 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms