RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 DYNLT3P51808 116 aa20.58■□□□□ 0.89
CTSA-203ENST00000372459 PSENENQ9NZ42 101 aa20.58■□□□□ 0.89
CTSA-203ENST00000372459 ANKHD1Q8IWZ3 2542 aaKnown RBP20.58■□□□□ 0.88
CTSA-203ENST00000372459 RELNP78509 3460 aa20.58■□□□□ 0.88
CTSA-203ENST00000372459 A0A1W2PPE3 182 aa20.57■□□□□ 0.88
CTSA-203ENST00000372459 MARCH11A6NNE9 402 aa20.57■□□□□ 0.88
CTSA-203ENST00000372459 RNASEK-C17orf49H0YIS7 233 aa20.57■□□□□ 0.88
CTSA-203ENST00000372459 H7C2Y5 167 aa20.57■□□□□ 0.88
CTSA-203ENST00000372459 FCN3O75636 299 aa20.57■□□□□ 0.88
CTSA-203ENST00000372459 MMP23AO75900 390 aa20.57■□□□□ 0.88
CTSA-203ENST00000372459 SPP1P10451 314 aa20.57■□□□□ 0.88
CTSA-203ENST00000372459 UBE2KP61086 200 aa20.57■□□□□ 0.88
CTSA-203ENST00000372459 TNFRSF9Q07011 255 aa20.57■□□□□ 0.88
CTSA-203ENST00000372459 TMEM88Q6PEY1 159 aa20.57■□□□□ 0.88
CTSA-203ENST00000372459 H1FXQ92522 213 aaKnown RBP20.57■□□□□ 0.88
CTSA-203ENST00000372459 ZNF714Q96N38 554 aa20.57■□□□□ 0.88
CTSA-203ENST00000372459 S1PR3Q99500 378 aa20.57■□□□□ 0.88
CTSA-203ENST00000372459 PLA2G2EQ9NZK7 142 aa20.57■□□□□ 0.88
CTSA-203ENST00000372459 HSPB7Q9UBY9 170 aa20.57■□□□□ 0.88
CTSA-203ENST00000372459 FAM96BQ9Y3D0 163 aa20.57■□□□□ 0.88
CTSA-203ENST00000372459 NBEAQ8NFP9 2946 aa20.57■□□□□ 0.88
CTSA-203ENST00000372459 NBASA2RRP1 2371 aa20.57■□□□□ 0.88
CTSA-203ENST00000372459 SAA2-SAA4A0A096LPE2 208 aa20.57■□□□□ 0.88
CTSA-203ENST00000372459 H3BP45 60 aa20.57■□□□□ 0.88
CTSA-203ENST00000372459 DVL1O14640 695 aa20.57■□□□□ 0.88
CTSA-203ENST00000372459 SAA2P0DJI9 122 aaPredicted RBP20.57■□□□□ 0.88
CTSA-203ENST00000372459 SULT1A1P50225 295 aa20.57■□□□□ 0.88
CTSA-203ENST00000372459 C4orf17Q53FE4 359 aa20.57■□□□□ 0.88
CTSA-203ENST00000372459 Q6ZRG5 221 aa20.57■□□□□ 0.88
CTSA-203ENST00000372459 TMEM217Q8N7C4 229 aa20.57■□□□□ 0.88
CTSA-203ENST00000372459 R3HDM4Q96D70 268 aa20.57■□□□□ 0.88
CTSA-203ENST00000372459 CTSZQ9UBR2 303 aa20.57■□□□□ 0.88
CTSA-203ENST00000372459 HCFC1P51610 2035 aa20.56■□□□□ 0.88
CTSA-203ENST00000372459 NPBWR1P48145 328 aa20.56■□□□□ 0.88
CTSA-203ENST00000372459 GNG10P50151 68 aa20.56■□□□□ 0.88
CTSA-203ENST00000372459 TMEM200BQ69YZ2 307 aa20.56■□□□□ 0.88
CTSA-203ENST00000372459 LYG1Q8N1E2 194 aa20.56■□□□□ 0.88
CTSA-203ENST00000372459 HSD17B11Q8NBQ5 300 aa20.56■□□□□ 0.88
CTSA-203ENST00000372459 KALRNO60229 2985 aa20.56■□□□□ 0.88
CTSA-203ENST00000372459 DAOP14920 347 aa20.55■□□□□ 0.88
CTSA-203ENST00000372459 MRPS11P82912 194 aaKnown RBP20.55■□□□□ 0.88
CTSA-203ENST00000372459 CBLN2Q8IUK8 224 aa20.55■□□□□ 0.88
CTSA-203ENST00000372459 SFTA3P0C7M3 94 aa20.55■□□□□ 0.88
CTSA-203ENST00000372459 DVL1P1P54792 670 aaPredicted RBP20.55■□□□□ 0.88
CTSA-203ENST00000372459 HEPN1Q6WQI6 88 aa20.55■□□□□ 0.88
CTSA-203ENST00000372459 C1orf229Q6ZS94 237 aaPredicted RBP20.55■□□□□ 0.88
CTSA-203ENST00000372459 SLC25A48Q6ZT89 311 aaKnown RBP20.55■□□□□ 0.88
CTSA-203ENST00000372459 COMMD1Q8N668 190 aa20.55■□□□□ 0.88
CTSA-203ENST00000372459 DDB2Q92466 427 aa20.55■□□□□ 0.88
CTSA-203ENST00000372459 RBKSQ9H477 322 aa20.55■□□□□ 0.88
CTSA-203ENST00000372459 THBS3P49746 956 aa20.54■□□□□ 0.88
CTSA-203ENST00000372459 ADTRPQ96IZ2 230 aa20.54■□□□□ 0.88
CTSA-203ENST00000372459 ATP5SQ99766 215 aa20.54■□□□□ 0.88
CTSA-203ENST00000372459 FAM157AC9JC47 383 aa20.54■□□□□ 0.88
CTSA-203ENST00000372459 DFFBO76075 338 aa20.54■□□□□ 0.88
CTSA-203ENST00000372459 CCL3L1P16619 93 aa20.54■□□□□ 0.88
CTSA-203ENST00000372459 TMEM267Q0VDI3 215 aaPredicted RBP20.54■□□□□ 0.88
CTSA-203ENST00000372459 ZNF251Q9BRH9 671 aa20.54■□□□□ 0.88
CTSA-203ENST00000372459 RBMXL2O75526 392 aaKnown RBP20.53■□□□□ 0.88
CTSA-203ENST00000372459 FSTL3O95633 263 aa20.53■□□□□ 0.88
CTSA-203ENST00000372459 F12P00748 615 aaPredicted RBP20.53■□□□□ 0.88
CTSA-203ENST00000372459 GNLYP22749 145 aa20.53■□□□□ 0.88
CTSA-203ENST00000372459 COL8A2P25067 703 aa20.53■□□□□ 0.88
CTSA-203ENST00000372459 UQCRFS1P47985 274 aa20.53■□□□□ 0.88
CTSA-203ENST00000372459 OR4S2Q8NH73 311 aa20.53■□□□□ 0.88
CTSA-203ENST00000372459 SH3BGRL3Q9H299 93 aa20.53■□□□□ 0.88
CTSA-203ENST00000372459 CBLN4Q9NTU7 201 aa20.53■□□□□ 0.88
CTSA-203ENST00000372459 ITPR1Q14643 2758 aa20.53■□□□□ 0.88
CTSA-203ENST00000372459 FAM90A9PA6NNJ1 464 aa20.52■□□□□ 0.88
CTSA-203ENST00000372459 ERVK-16P61578 105 aa20.52■□□□□ 0.88
CTSA-203ENST00000372459 RAB39BQ96DA2 213 aa20.52■□□□□ 0.88
CTSA-203ENST00000372459 FAM122AQ96E09 287 aa20.52■□□□□ 0.88
CTSA-203ENST00000372459 RAB1BQ9H0U4 201 aa20.52■□□□□ 0.88
CTSA-203ENST00000372459 YLPM1P49750 1951 aaKnown RBP20.52■□□□□ 0.88
CTSA-203ENST00000372459 ZG16O60844 167 aa20.52■□□□□ 0.87
CTSA-203ENST00000372459 DANCRP0C864 163 aa20.52■□□□□ 0.87
CTSA-203ENST00000372459 NQO2P16083 231 aa20.52■□□□□ 0.87
CTSA-203ENST00000372459 AGAP20933 346 aa20.52■□□□□ 0.87
CTSA-203ENST00000372459 RAB5CP51148 216 aa20.52■□□□□ 0.87
CTSA-203ENST00000372459 KLF2Q9Y5W3 355 aaPredicted RBP20.52■□□□□ 0.87
CTSA-203ENST00000372459 LYNX1G3V0Z9 82 aa20.51■□□□□ 0.87
CTSA-203ENST00000372459 LYNX1P0DP58 116 aa20.51■□□□□ 0.87
CTSA-203ENST00000372459 SPANXN5Q5MJ07 72 aa20.51■□□□□ 0.87
CTSA-203ENST00000372459 ITLN2Q8WWU7 325 aaPredicted RBP20.51■□□□□ 0.87
CTSA-203ENST00000372459 METTL15P1P0C7V9 234 aa20.5■□□□□ 0.87
CTSA-203ENST00000372459 ATP6V0CP27449 155 aa20.5■□□□□ 0.87
CTSA-203ENST00000372459 ERVFRD-1P60508 538 aa20.5■□□□□ 0.87
CTSA-203ENST00000372459 HBG1P69891 147 aa20.5■□□□□ 0.87
CTSA-203ENST00000372459 HBG2P69892 147 aa20.5■□□□□ 0.87
CTSA-203ENST00000372459 MLXQ9UH92 298 aa20.5■□□□□ 0.87
CTSA-203ENST00000372459 KPTNQ9Y664 436 aa20.5■□□□□ 0.87
CTSA-203ENST00000372459 GNPNAT1Q96EK6 184 aaPredicted RBP20.5■□□□□ 0.87
CTSA-203ENST00000372459 CIB3Q96Q77 187 aaPredicted RBP20.5■□□□□ 0.87
CTSA-203ENST00000372459 OR9G9P0C7N8 305 aa20.49■□□□□ 0.87
CTSA-203ENST00000372459 ZNF383Q8NA42 475 aa20.49■□□□□ 0.87
CTSA-203ENST00000372459 DTD1Q8TEA8 209 aa20.49■□□□□ 0.87
CTSA-203ENST00000372459 CACFD1Q9UGQ2 172 aa20.49■□□□□ 0.87
CTSA-203ENST00000372459 STRAPQ9Y3F4 350 aaKnown RBP20.49■□□□□ 0.87
CTSA-203ENST00000372459 AGPAT2O15120 278 aa20.48■□□□□ 0.87
CTSA-203ENST00000372459 TSPAN15O95858 294 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms