RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 BEST4Q8NFU0 473 aa14.73□□□□□ -0.05
CKS1B-203ENST00000368439 SLC25A46Q96AG3 418 aa14.73□□□□□ -0.05
CKS1B-203ENST00000368439 ADTRPQ96IZ2 230 aa14.73□□□□□ -0.05
CKS1B-203ENST00000368439 HARBI1Q96MB7 349 aa14.73□□□□□ -0.05
CKS1B-203ENST00000368439 FOXA2Q9Y261 457 aaPredicted RBP14.73□□□□□ -0.05
CKS1B-203ENST00000368439 XRCC3O43542 346 aa14.72□□□□□ -0.05
CKS1B-203ENST00000368439 RRASP10301 218 aa14.72□□□□□ -0.05
CKS1B-203ENST00000368439 PJVKQ0ZLH3 352 aa14.72□□□□□ -0.05
CKS1B-203ENST00000368439 UBE2NLQ5JXB2 153 aa14.72□□□□□ -0.05
CKS1B-203ENST00000368439 TMEM65Q6PI78 240 aa14.72□□□□□ -0.05
CKS1B-203ENST00000368439 LFNGQ8NES3 379 aa14.72□□□□□ -0.05
CKS1B-203ENST00000368439 VSIG4Q9Y279 399 aa14.72□□□□□ -0.05
CKS1B-203ENST00000368439 RBMX2Q9Y388 322 aaKnown RBP14.72□□□□□ -0.05
CKS1B-203ENST00000368439 A3GALT2U3KPV4 340 aa14.72□□□□□ -0.05
CKS1B-203ENST00000368439 VBP1P61758 197 aa14.71□□□□□ -0.05
CKS1B-203ENST00000368439 RPL30P62888 115 aaKnown RBP14.71□□□□□ -0.05
CKS1B-203ENST00000368439 TMEM267Q0VDI3 215 aaPredicted RBP14.71□□□□□ -0.05
CKS1B-203ENST00000368439 FXYD3Q14802 87 aa14.71□□□□□ -0.05
CKS1B-203ENST00000368439 RTL8BQ17RB0 113 aa14.71□□□□□ -0.05
CKS1B-203ENST00000368439 ASPHD1Q5U4P2 390 aa14.71□□□□□ -0.05
CKS1B-203ENST00000368439 UNQ5815/PRO19632Q6UWF5 114 aa14.71□□□□□ -0.05
CKS1B-203ENST00000368439 CASTOR1Q8WTX7 329 aa14.71□□□□□ -0.05
CKS1B-203ENST00000368439 ARPC1AQ92747 370 aa14.71□□□□□ -0.05
CKS1B-203ENST00000368439 SNAPC3Q92966 411 aa14.71□□□□□ -0.05
CKS1B-203ENST00000368439 S100A16Q96FQ6 103 aaKnown RBP14.71□□□□□ -0.05
CKS1B-203ENST00000368439 MCRIP2Q9BUT9 160 aaKnown RBP14.71□□□□□ -0.05
CKS1B-203ENST00000368439 SHOXO15266 292 aa14.7□□□□□ -0.06
CKS1B-203ENST00000368439 SLC22A5O76082 557 aa14.7□□□□□ -0.06
CKS1B-203ENST00000368439 HOXD3P31249 432 aaPredicted RBP14.7□□□□□ -0.06
CKS1B-203ENST00000368439 GNB1P62873 340 aa14.7□□□□□ -0.06
CKS1B-203ENST00000368439 OVCH2Q7RTZ1 564 aa14.7□□□□□ -0.06
CKS1B-203ENST00000368439 SAMD12Q8N8I0 201 aa14.7□□□□□ -0.06
CKS1B-203ENST00000368439 OR11H1Q8NG94 326 aa14.7□□□□□ -0.06
CKS1B-203ENST00000368439 ABHD5Q8WTS1 349 aa14.7□□□□□ -0.06
CKS1B-203ENST00000368439 KCTD12Q96CX2 325 aaKnown RBP14.7□□□□□ -0.06
CKS1B-203ENST00000368439 CRYZL1O95825 349 aa14.69□□□□□ -0.06
CKS1B-203ENST00000368439 BRWD1-AS2P59051 145 aa14.69□□□□□ -0.06
CKS1B-203ENST00000368439 TAS2R20P59543 309 aa14.69□□□□□ -0.06
CKS1B-203ENST00000368439 ARPC4P59998 168 aa14.69□□□□□ -0.06
CKS1B-203ENST00000368439 UBE2KP61086 200 aa14.69□□□□□ -0.06
CKS1B-203ENST00000368439 CBX3Q13185 183 aa14.69□□□□□ -0.06
CKS1B-203ENST00000368439 ACTBL2Q562R1 376 aa14.69□□□□□ -0.06
CKS1B-203ENST00000368439 OR5M8Q8NGP6 311 aa14.69□□□□□ -0.06
CKS1B-203ENST00000368439 OSR1Q8TAX0 266 aaPredicted RBP14.69□□□□□ -0.06
CKS1B-203ENST00000368439 GPR61Q9BZJ8 451 aa14.69□□□□□ -0.06
CKS1B-203ENST00000368439 NAA50Q9GZZ1 169 aaKnown RBP14.69□□□□□ -0.06
CKS1B-203ENST00000368439 ANAPC10Q9UM13 185 aa14.69□□□□□ -0.06
CKS1B-203ENST00000368439 DNAH9Q9NYC9 4486 aa14.68□□□□□ -0.06
CKS1B-203ENST00000368439 MEIS3P1A6NDR6 274 aa14.68□□□□□ -0.06
CKS1B-203ENST00000368439 K7EIL1 84 aa14.68□□□□□ -0.06
CKS1B-203ENST00000368439 FCER2P06734 321 aa14.68□□□□□ -0.06
CKS1B-203ENST00000368439 AADACP22760 399 aa14.68□□□□□ -0.06
CKS1B-203ENST00000368439 FCGR2CP31995 323 aa14.68□□□□□ -0.06
CKS1B-203ENST00000368439 CBX5P45973 191 aa14.68□□□□□ -0.06
CKS1B-203ENST00000368439 RAB25P57735 213 aa14.68□□□□□ -0.06
CKS1B-203ENST00000368439 CTF1Q16619 201 aa14.68□□□□□ -0.06
CKS1B-203ENST00000368439 PYHIN1Q6K0P9 492 aa14.68□□□□□ -0.06
CKS1B-203ENST00000368439 KCTD9Q7L273 389 aa14.68□□□□□ -0.06
CKS1B-203ENST00000368439 ANKRD13BQ86YJ7 626 aa14.68□□□□□ -0.06
CKS1B-203ENST00000368439 TEX45Q8NA69 505 aa14.68□□□□□ -0.06
CKS1B-203ENST00000368439 OR1N2Q8NGR9 330 aa14.68□□□□□ -0.06
CKS1B-203ENST00000368439 GRPEL2Q8TAA5 225 aa14.68□□□□□ -0.06
CKS1B-203ENST00000368439 MRAPQ8TCY5 172 aa14.68□□□□□ -0.06
CKS1B-203ENST00000368439 OR5B12Q96R08 314 aa14.68□□□□□ -0.06
CKS1B-203ENST00000368439 ALX4Q9H161 411 aaPredicted RBP14.68□□□□□ -0.06
CKS1B-203ENST00000368439 FCGR3BO75015 233 aa14.67□□□□□ -0.06
CKS1B-203ENST00000368439 EIF4EP06730 217 aaKnown RBP14.67□□□□□ -0.06
CKS1B-203ENST00000368439 TMEM69Q5SWH9 247 aa14.67□□□□□ -0.06
CKS1B-203ENST00000368439 OR5AP2Q8NGF4 316 aa14.67□□□□□ -0.06
CKS1B-203ENST00000368439 HSD17B10Q99714 261 aaKnown RBP14.67□□□□□ -0.06
CKS1B-203ENST00000368439 CCL28Q9NRJ3 127 aa14.67□□□□□ -0.06
CKS1B-203ENST00000368439 WI2-2373I1.2A0A1W2PRP0 233 aa14.66□□□□□ -0.06
CKS1B-203ENST00000368439 GABARAPO95166 117 aa14.66□□□□□ -0.06
CKS1B-203ENST00000368439 CNIH1O95406 144 aa14.66□□□□□ -0.06
CKS1B-203ENST00000368439 PPYP01298 95 aa14.66□□□□□ -0.06
CKS1B-203ENST00000368439 NAT1P18440 290 aa14.66□□□□□ -0.06
CKS1B-203ENST00000368439 ZNF616Q08AN1 781 aa14.66□□□□□ -0.06
CKS1B-203ENST00000368439 MSMO1Q15800 293 aa14.66□□□□□ -0.06
CKS1B-203ENST00000368439 PRSS8Q16651 343 aa14.66□□□□□ -0.06
CKS1B-203ENST00000368439 VMA21Q3ZAQ7 101 aa14.66□□□□□ -0.06
CKS1B-203ENST00000368439 IDO2Q6ZQW0 420 aa14.66□□□□□ -0.06
CKS1B-203ENST00000368439 MFSD4AQ8N468 514 aa14.66□□□□□ -0.06
CKS1B-203ENST00000368439 RHOVQ96L33 236 aa14.66□□□□□ -0.06
CKS1B-203ENST00000368439 CMTM3Q96MX0 182 aa14.66□□□□□ -0.06
CKS1B-203ENST00000368439 MS4A10Q96PG2 267 aa14.66□□□□□ -0.06
CKS1B-203ENST00000368439 GPHA2Q96T91 129 aa14.66□□□□□ -0.06
CKS1B-203ENST00000368439 LGALS1P09382 135 aaKnown RBP14.65□□□□□ -0.06
CKS1B-203ENST00000368439 SAA1P0DJI8 122 aaPredicted RBP14.65□□□□□ -0.06
CKS1B-203ENST00000368439 CDK10Q15131 360 aa14.65□□□□□ -0.06
CKS1B-203ENST00000368439 OR2B11Q5JQS5 317 aa14.65□□□□□ -0.06
CKS1B-203ENST00000368439 GIMAP1Q8WWP7 306 aa14.65□□□□□ -0.06
CKS1B-203ENST00000368439 SLA2Q9H6Q3 261 aa14.65□□□□□ -0.06
CKS1B-203ENST00000368439 COMMD3Q9UBI1 195 aa14.65□□□□□ -0.06
CKS1B-203ENST00000368439 PRELID3BQ9Y3B1 194 aa14.65□□□□□ -0.06
CKS1B-203ENST00000368439 H3BUA1 57 aa14.64□□□□□ -0.07
CKS1B-203ENST00000368439 BRI3O95415 125 aa14.64□□□□□ -0.07
CKS1B-203ENST00000368439 APOA1P02647 267 aa14.64□□□□□ -0.07
CKS1B-203ENST00000368439 OR8U8P0C7N1 319 aa14.64□□□□□ -0.07
CKS1B-203ENST00000368439 ALDH3B2P48448 385 aa14.64□□□□□ -0.07
CKS1B-203ENST00000368439 ZNF66Q6ZN08 573 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms