RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 LGI3Q8N145 548 aa16.68■□□□□ 0.26
SHISA4-201ENST00000362011 OR8H3Q8N146 312 aa16.68■□□□□ 0.26
SHISA4-201ENST00000362011 CD300LFQ8TDQ1 290 aa16.68■□□□□ 0.26
SHISA4-201ENST00000362011 TMEM158Q8WZ71 300 aa16.68■□□□□ 0.26
SHISA4-201ENST00000362011 SLC35D1Q9NTN3 355 aa16.68■□□□□ 0.26
SHISA4-201ENST00000362011 HILPDAQ9Y5L2 63 aa16.68■□□□□ 0.26
SHISA4-201ENST00000362011 IGHV1-3A0A0C4DH29 117 aa16.67■□□□□ 0.26
SHISA4-201ENST00000362011 SERPINE2P07093 398 aa16.67■□□□□ 0.26
SHISA4-201ENST00000362011 IGHV4-38-2P0DP08 117 aa16.67■□□□□ 0.26
SHISA4-201ENST00000362011 BCAP31P51572 246 aa16.67■□□□□ 0.26
SHISA4-201ENST00000362011 RRAS2P62070 204 aaPredicted RBP16.67■□□□□ 0.26
SHISA4-201ENST00000362011 RUSC1-AS1Q66K80 236 aa16.67■□□□□ 0.26
SHISA4-201ENST00000362011 MALSU1Q96EH3 234 aa16.67■□□□□ 0.26
SHISA4-201ENST00000362011 A0A1W2PPI3 338 aa16.66■□□□□ 0.26
SHISA4-201ENST00000362011 RBFOX2O43251 390 aaKnown RBP eCLIP16.66■□□□□ 0.26
SHISA4-201ENST00000362011 RRASP10301 218 aa16.66■□□□□ 0.26
SHISA4-201ENST00000362011 RPA2P15927 270 aa16.66■□□□□ 0.26
SHISA4-201ENST00000362011 LPAR6P43657 344 aa16.66■□□□□ 0.26
SHISA4-201ENST00000362011 RTL8BQ17RB0 113 aa16.66■□□□□ 0.26
SHISA4-201ENST00000362011 ZNF585BQ52M93 769 aa16.66■□□□□ 0.26
SHISA4-201ENST00000362011 KLF17Q5JT82 389 aaPredicted RBP16.66■□□□□ 0.26
SHISA4-201ENST00000362011 CCDC144NLQ6NUI1 221 aa16.66■□□□□ 0.26
SHISA4-201ENST00000362011 MOB3BQ86TA1 216 aa16.66■□□□□ 0.26
SHISA4-201ENST00000362011 ZNF695Q8IW36 515 aa16.66■□□□□ 0.26
SHISA4-201ENST00000362011 PIP4P2Q8N4L2 257 aa16.66■□□□□ 0.26
SHISA4-201ENST00000362011 LRTM2Q8N967 370 aa16.66■□□□□ 0.26
SHISA4-201ENST00000362011 OR5AN1Q8NGI8 311 aa16.66■□□□□ 0.26
SHISA4-201ENST00000362011 OR4S2Q8NH73 311 aa16.66■□□□□ 0.26
SHISA4-201ENST00000362011 IL22RA2Q969J5 263 aa16.66■□□□□ 0.26
SHISA4-201ENST00000362011 PIGBOS1A0A0B4J2F0 54 aa16.65■□□□□ 0.26
SHISA4-201ENST00000362011 A8MV72 311 aaPredicted RBP16.65■□□□□ 0.26
SHISA4-201ENST00000362011 H0YJW9 148 aa16.65■□□□□ 0.26
SHISA4-201ENST00000362011 CDS2O95674 445 aa16.65■□□□□ 0.26
SHISA4-201ENST00000362011 MC5RP33032 325 aa16.65■□□□□ 0.26
SHISA4-201ENST00000362011 BRWD1-AS2P59051 145 aa16.65■□□□□ 0.26
SHISA4-201ENST00000362011 SSX2Q16385 188 aa16.65■□□□□ 0.26
SHISA4-201ENST00000362011 TMEM268Q5VZI3 342 aa16.65■□□□□ 0.26
SHISA4-201ENST00000362011 DHRS7BQ6IAN0 325 aaPredicted RBP16.65■□□□□ 0.26
SHISA4-201ENST00000362011 BRD3OSQ6XYD6 125 aa16.65■□□□□ 0.26
SHISA4-201ENST00000362011 LHFPL5Q8TAF8 219 aa16.65■□□□□ 0.26
SHISA4-201ENST00000362011 RBPMSQ93062 196 aaKnown RBP16.65■□□□□ 0.26
SHISA4-201ENST00000362011 TMEM56Q96MV1 263 aa16.65■□□□□ 0.26
SHISA4-201ENST00000362011 YAE1D1Q9NRH1 226 aa16.65■□□□□ 0.26
SHISA4-201ENST00000362011 WASHC3Q9Y3C0 194 aa16.65■□□□□ 0.26
SHISA4-201ENST00000362011 TMEM56-RWDD3S4R434 201 aa16.65■□□□□ 0.26
SHISA4-201ENST00000362011 DUXBA0A1W2PPF3 345 aa16.64■□□□□ 0.25
SHISA4-201ENST00000362011 H7C2Y5 167 aa16.64■□□□□ 0.25
SHISA4-201ENST00000362011 RAMP3O60896 148 aa16.64■□□□□ 0.25
SHISA4-201ENST00000362011 RAB13P51153 203 aa16.64■□□□□ 0.25
SHISA4-201ENST00000362011 ARHGDIBP52566 201 aa16.64■□□□□ 0.25
SHISA4-201ENST00000362011 BPIFB3P59826 476 aa16.64■□□□□ 0.25
SHISA4-201ENST00000362011 PDPNQ86YL7 162 aa16.64■□□□□ 0.25
SHISA4-201ENST00000362011 SELENOHQ8IZQ5 122 aaKnown RBP16.64■□□□□ 0.25
SHISA4-201ENST00000362011 TEX29Q8N6K0 151 aa16.64■□□□□ 0.25
SHISA4-201ENST00000362011 NANPQ8TBE9 248 aa16.64■□□□□ 0.25
SHISA4-201ENST00000362011 MGAT4CQ9UBM8 478 aa16.64■□□□□ 0.25
SHISA4-201ENST00000362011 HMX3A6NHT5 357 aa16.63■□□□□ 0.25
SHISA4-201ENST00000362011 DBX1A6NMT0 343 aa16.63■□□□□ 0.25
SHISA4-201ENST00000362011 S1PR2O95136 353 aa16.63■□□□□ 0.25
SHISA4-201ENST00000362011 CRYZL1O95825 349 aa16.63■□□□□ 0.25
SHISA4-201ENST00000362011 HPRT1P00492 218 aa16.63■□□□□ 0.25
SHISA4-201ENST00000362011 FSHBP01225 129 aa16.63■□□□□ 0.25
SHISA4-201ENST00000362011 FCN2Q15485 313 aa16.63■□□□□ 0.25
SHISA4-201ENST00000362011 DYNAPQ8N1N2 210 aa16.63■□□□□ 0.25
SHISA4-201ENST00000362011 SLC35G3Q8N808 338 aa16.63■□□□□ 0.25
SHISA4-201ENST00000362011 C17orf50Q8WW18 174 aa16.63■□□□□ 0.25
SHISA4-201ENST00000362011 AJUBAQ96IF1 538 aa16.63■□□□□ 0.25
SHISA4-201ENST00000362011 PLEKHA2Q9HB19 425 aa16.63■□□□□ 0.25
SHISA4-201ENST00000362011 RAB18Q9NP72 206 aa16.63■□□□□ 0.25
SHISA4-201ENST00000362011 COMMD9Q9P000 198 aa16.63■□□□□ 0.25
SHISA4-201ENST00000362011 GOSR2O14653 212 aa16.62■□□□□ 0.25
SHISA4-201ENST00000362011 TIMM23O14925 209 aa16.62■□□□□ 0.25
SHISA4-201ENST00000362011 ATG12O94817 140 aa16.62■□□□□ 0.25
SHISA4-201ENST00000362011 IGKV1-39P01597 117 aa16.62■□□□□ 0.25
SHISA4-201ENST00000362011 IGKV1D-39P04432 117 aa16.62■□□□□ 0.25
SHISA4-201ENST00000362011 HOXB5P09067 269 aa16.62■□□□□ 0.25
SHISA4-201ENST00000362011 FAM157CP0CG43 387 aa16.62■□□□□ 0.25
SHISA4-201ENST00000362011 TRAPPC2P0DI81 140 aa16.62■□□□□ 0.25
SHISA4-201ENST00000362011 TRAPPC2BP0DI82 140 aa16.62■□□□□ 0.25
SHISA4-201ENST00000362011 SULT1A3P0DMM9 295 aa16.62■□□□□ 0.25
SHISA4-201ENST00000362011 SULT1A4P0DMN0 295 aa16.62■□□□□ 0.25
SHISA4-201ENST00000362011 CHAC2Q8WUX2 184 aa16.62■□□□□ 0.25
SHISA4-201ENST00000362011 TMEM160Q9NX00 188 aa16.62■□□□□ 0.25
SHISA4-201ENST00000362011 NUP50Q9UKX7 468 aa16.62■□□□□ 0.25
SHISA4-201ENST00000362011 IGHV3-72A0A0B4J1Y9 119 aa16.61■□□□□ 0.25
SHISA4-201ENST00000362011 IFNA21P01568 189 aa16.61■□□□□ 0.25
SHISA4-201ENST00000362011 CD1BP29016 333 aa16.61■□□□□ 0.25
SHISA4-201ENST00000362011 HABP2Q14520 560 aaPredicted RBP16.61■□□□□ 0.25
SHISA4-201ENST00000362011 C2orf68Q2NKX9 166 aa16.61■□□□□ 0.25
SHISA4-201ENST00000362011 LYZL2Q7Z4W2 148 aa16.61■□□□□ 0.25
SHISA4-201ENST00000362011 OR11H7Q8NGC8 314 aa16.61■□□□□ 0.25
SHISA4-201ENST00000362011 RNASE11Q8TAA1 199 aaKnown RBP16.61■□□□□ 0.25
SHISA4-201ENST00000362011 CFHR4Q92496 578 aa16.61■□□□□ 0.25
SHISA4-201ENST00000362011 TET2Q6N021 2002 aaPredicted RBP16.61■□□□□ 0.25
SHISA4-201ENST00000362011 A0A0U1RQK1 487 aa16.6■□□□□ 0.25
SHISA4-201ENST00000362011 CCSO14618 274 aa16.6■□□□□ 0.25
SHISA4-201ENST00000362011 ADAP1O75689 374 aa16.6■□□□□ 0.25
SHISA4-201ENST00000362011 PAX6P26367 422 aa16.6■□□□□ 0.25
SHISA4-201ENST00000362011 AKR1C2P52895 323 aa16.6■□□□□ 0.25
SHISA4-201ENST00000362011 TMEM177Q53S58 311 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms