RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 DOLPP1Q86YN1 238 aa11.93□□□□□ -0.5
SMC5-201ENST00000361138 CT55Q8WUE5 264 aa11.93□□□□□ -0.5
SMC5-201ENST00000361138 M0R296 226 aa11.92□□□□□ -0.5
SMC5-201ENST00000361138 MAS1LP35410 378 aa11.92□□□□□ -0.5
SMC5-201ENST00000361138 COMPP49747 757 aaPredicted RBP11.92□□□□□ -0.5
SMC5-201ENST00000361138 MOGAT3Q86VF5 341 aa11.92□□□□□ -0.5
SMC5-201ENST00000361138 DRAM1Q8N682 238 aa11.92□□□□□ -0.5
SMC5-201ENST00000361138 OR1L8Q8NGR8 309 aa11.92□□□□□ -0.5
SMC5-201ENST00000361138 IGHV1-45A0A0A0MS14 117 aa11.92□□□□□ -0.5
SMC5-201ENST00000361138 CENPWQ5EE01 88 aa11.92□□□□□ -0.5
SMC5-201ENST00000361138 OR4D5Q8NGN0 318 aa11.92□□□□□ -0.5
SMC5-201ENST00000361138 HARBI1Q96MB7 349 aa11.92□□□□□ -0.5
SMC5-201ENST00000361138 SRXN1Q9BYN0 137 aa11.92□□□□□ -0.5
SMC5-201ENST00000361138 MARCH11A6NNE9 402 aa11.92□□□□□ -0.5
SMC5-201ENST00000361138 NUBP1P53384 320 aa11.92□□□□□ -0.5
SMC5-201ENST00000361138 PGLYRP4Q96LB8 373 aa11.92□□□□□ -0.5
SMC5-201ENST00000361138 COLQQ9Y215 455 aaPredicted RBP11.92□□□□□ -0.5
SMC5-201ENST00000361138 SLC35E4Q6ICL7 350 aa11.92□□□□□ -0.5
SMC5-201ENST00000361138 ALKBH7Q9BT30 221 aaPredicted RBP11.92□□□□□ -0.5
SMC5-201ENST00000361138 MYLKQ15746 1914 aa11.92□□□□□ -0.5
SMC5-201ENST00000361138 LDLRAD4O15165 306 aa11.92□□□□□ -0.5
SMC5-201ENST00000361138 AMBPP02760 352 aa11.92□□□□□ -0.5
SMC5-201ENST00000361138 S100A4P26447 101 aaKnown RBP11.92□□□□□ -0.5
SMC5-201ENST00000361138 RSPO4Q2I0M5 234 aaPredicted RBP11.92□□□□□ -0.5
SMC5-201ENST00000361138 TPRX1Q8N7U7 411 aa11.92□□□□□ -0.5
SMC5-201ENST00000361138 SMIM12Q96EX1 92 aa11.92□□□□□ -0.5
SMC5-201ENST00000361138 OR2T8A6NH00 312 aa11.91□□□□□ -0.5
SMC5-201ENST00000361138 SLC17A3O00476 420 aa11.91□□□□□ -0.5
SMC5-201ENST00000361138 STAG3L2P0CL84 134 aa11.91□□□□□ -0.5
SMC5-201ENST00000361138 SBF1O95248 1867 aa11.91□□□□□ -0.5
SMC5-201ENST00000361138 PRDX2P32119 198 aa11.91□□□□□ -0.5
SMC5-201ENST00000361138 CEBPDP49716 269 aaPredicted RBP11.91□□□□□ -0.5
SMC5-201ENST00000361138 SUPT4H1P63272 117 aaKnown RBP11.91□□□□□ -0.5
SMC5-201ENST00000361138 SP7Q8TDD2 431 aaPredicted RBP11.91□□□□□ -0.5
SMC5-201ENST00000361138 RPEQ96AT9 228 aa11.91□□□□□ -0.5
SMC5-201ENST00000361138 TCFL5Q9UL49 500 aa11.91□□□□□ -0.5
SMC5-201ENST00000361138 CLDN16Q9Y5I7 305 aa11.91□□□□□ -0.5
SMC5-201ENST00000361138 HLA-DRB1P01911 266 aa11.91□□□□□ -0.5
SMC5-201ENST00000361138 LYL1P12980 280 aa11.91□□□□□ -0.5
SMC5-201ENST00000361138 FAM89BQ8N5H3 189 aa11.91□□□□□ -0.5
SMC5-201ENST00000361138 RTN4RQ9BZR6 473 aa11.91□□□□□ -0.5
SMC5-201ENST00000361138 SCO2A0A1W2PP80 73 aa11.91□□□□□ -0.5
SMC5-201ENST00000361138 CELA2AP08217 269 aa11.91□□□□□ -0.5
SMC5-201ENST00000361138 ATP5G3P48201 142 aa11.91□□□□□ -0.5
SMC5-201ENST00000361138 CEACAM18A8MTB9 384 aa11.91□□□□□ -0.5
SMC5-201ENST00000361138 BHLHA15Q7RTS1 189 aaPredicted RBP11.91□□□□□ -0.5
SMC5-201ENST00000361138 STPG3Q8N7X2 389 aa11.91□□□□□ -0.5
SMC5-201ENST00000361138 ZDHHC16Q969W1 377 aa11.91□□□□□ -0.5
SMC5-201ENST00000361138 GRAMD2BQ96HH9 432 aa11.91□□□□□ -0.5
SMC5-201ENST00000361138 RASL11BQ9BPW5 248 aa11.91□□□□□ -0.5
SMC5-201ENST00000361138 PEF1Q9UBV8 284 aaKnown RBP11.91□□□□□ -0.5
SMC5-201ENST00000361138 A6NNC1 897 aa11.9□□□□□ -0.5
SMC5-201ENST00000361138 FBXW9Q5XUX1 488 aa11.9□□□□□ -0.5
SMC5-201ENST00000361138 C2orf88Q9BSF0 95 aa11.9□□□□□ -0.5
SMC5-201ENST00000361138 TMEM140Q9NV12 185 aa11.9□□□□□ -0.5
SMC5-201ENST00000361138 WNT16Q9UBV4 365 aa11.9□□□□□ -0.5
SMC5-201ENST00000361138 HIGD1AQ9Y241 93 aa11.9□□□□□ -0.5
SMC5-201ENST00000361138 SERF1AO75920 110 aa11.9□□□□□ -0.5
SMC5-201ENST00000361138 PRRX1P54821 245 aa11.9□□□□□ -0.5
SMC5-201ENST00000361138 ONECUT1Q9UBC0 465 aa11.9□□□□□ -0.5
SMC5-201ENST00000361138 UFC1Q9Y3C8 167 aa11.9□□□□□ -0.5
SMC5-201ENST00000361138 FBLL1A6NHQ2 334 aaKnown RBP11.9□□□□□ -0.5
SMC5-201ENST00000361138 NCBP2LA6PVI3 153 aaKnown RBP11.9□□□□□ -0.5
SMC5-201ENST00000361138 DNLZQ5SXM8 178 aa11.9□□□□□ -0.5
SMC5-201ENST00000361138 STPG1Q5TH74 334 aa11.9□□□□□ -0.5
SMC5-201ENST00000361138 TCF23Q7RTU1 214 aa11.9□□□□□ -0.5
SMC5-201ENST00000361138 MYOZ3Q8TDC0 251 aa11.9□□□□□ -0.5
SMC5-201ENST00000361138 TRBV24-1A0A075B6N3 115 aa11.9□□□□□ -0.51
SMC5-201ENST00000361138 CCL1P22362 96 aa11.9□□□□□ -0.51
SMC5-201ENST00000361138 HES3Q5TGS1 186 aa11.9□□□□□ -0.51
SMC5-201ENST00000361138 RAB37Q96AX2 223 aa11.9□□□□□ -0.51
SMC5-201ENST00000361138 DOCK4Q8N1I0 1966 aa11.9□□□□□ -0.51
SMC5-201ENST00000361138 LHFPL1Q86WI0 220 aa11.89□□□□□ -0.51
SMC5-201ENST00000361138 TMEM70Q9BUB7 260 aa11.89□□□□□ -0.51
SMC5-201ENST00000361138 LAMTOR2Q9Y2Q5 125 aa11.89□□□□□ -0.51
SMC5-201ENST00000361138 SYNGR3O43761 229 aa11.89□□□□□ -0.51
SMC5-201ENST00000361138 LINC00869P0C866 280 aa11.89□□□□□ -0.51
SMC5-201ENST00000361138 INO80CQ6PI98 192 aaPredicted RBP11.89□□□□□ -0.51
SMC5-201ENST00000361138 DLL1O00548 723 aa11.89□□□□□ -0.51
SMC5-201ENST00000361138 TMPRSS2O15393 492 aa11.89□□□□□ -0.51
SMC5-201ENST00000361138 TMEM106BQ9NUM4 274 aa11.89□□□□□ -0.51
SMC5-201ENST00000361138 OR4A8P0C604 315 aa11.89□□□□□ -0.51
SMC5-201ENST00000361138 LYZL4Q96KX0 146 aa11.89□□□□□ -0.51
SMC5-201ENST00000361138 AMMECR1Q9Y4X0 333 aaPredicted RBP11.89□□□□□ -0.51
SMC5-201ENST00000361138 hCG_38984A0A1B0GV85 526 aa11.89□□□□□ -0.51
SMC5-201ENST00000361138 IL6RP08887 468 aaPredicted RBP11.89□□□□□ -0.51
SMC5-201ENST00000361138 C8orf88P0DMB2 117 aa11.89□□□□□ -0.51
SMC5-201ENST00000361138 SCGB1D4Q6XE38 83 aa11.89□□□□□ -0.51
SMC5-201ENST00000361138 OR8B2Q96RD0 313 aa11.89□□□□□ -0.51
SMC5-201ENST00000361138 MRPL37Q9BZE1 423 aaKnown RBP11.89□□□□□ -0.51
SMC5-201ENST00000361138 RNF7Q9UBF6 113 aa11.89□□□□□ -0.51
SMC5-201ENST00000361138 ARF6P62330 175 aa11.88□□□□□ -0.51
SMC5-201ENST00000361138 OR5P3Q8WZ94 311 aa11.88□□□□□ -0.51
SMC5-201ENST00000361138 SNRNP40Q96DI7 357 aaKnown RBP11.88□□□□□ -0.51
SMC5-201ENST00000361138 IGKV1-9A0A0C4DH69 117 aa11.88□□□□□ -0.51
SMC5-201ENST00000361138 PRRG2O14669 202 aa11.88□□□□□ -0.51
SMC5-201ENST00000361138 ORM1P02763 201 aa11.88□□□□□ -0.51
SMC5-201ENST00000361138 PSMB2P49721 201 aa11.88□□□□□ -0.51
SMC5-201ENST00000361138 RPL31P62899 125 aaKnown RBP11.88□□□□□ -0.51
SMC5-201ENST00000361138 MST1LQ2TV78 715 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms